FFCP PHASE1:Hg19::chr9:27524537..27524559,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21714 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=202bp_to_AB463795,BC140280,BC141647_5end | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_1_at_IFNK_5end | |||
|id=chr9:27524537..27524559,+ | |||
|ontology_enrichment_celltype=CL:0002159!2.00e-34!13;CL:0000244!5.83e-29!4;CL:0000731!5.83e-29!4;CL:0000317!4.08e-26!2;CL:1000448!4.08e-26!2;CL:0002308!4.08e-26!2;CL:0002140!4.08e-26!2;CL:0000362!3.38e-25!8;CL:0000240!4.65e-19!6;CL:0000311!4.65e-19!6;CL:0000079!4.65e-19!6;CL:0000237!4.65e-19!6;CL:0000036!4.65e-19!6;CL:0000357!4.65e-19!6;CL:0000114!4.65e-19!6;CL:0002166!4.64e-18!3;CL:0002336!1.61e-13!1;CL:0002261!1.61e-13!1;CL:0002170!1.61e-13!1;CL:0002077!2.04e-13!33;CL:0000622!4.79e-11!5;CL:0000312!7.14e-11!5;CL:0000154!2.35e-09!6;CL:0000076!3.19e-09!62;CL:0000066!6.76e-08!254;CL:0000221!8.01e-08!71;CL:0002535!1.87e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000244;4.87e-45;4!CL:0000731;4.87e-45;4!CL:0000317;2.46e-40;2!CL:1000448;2.46e-40;2!CL:0002308;2.46e-40;2!CL:0002140;2.46e-40;2!CL:0002159;1.26e-35;14!CL:0002166;9.30e-28;3!CL:0000362;1.73e-20;9!CL:0000622;8.14e-17;5!CL:0000154;3.48e-14;6!CL:0002077;5.19e-13;34!CL:0000150;8.84e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,4.87e-45,4;CL:0000731,4.87e-45,4;CL:0000317,2.46e-40,2;CL:1000448,2.46e-40,2;CL:0002308,2.46e-40,2;CL:0002140,2.46e-40,2;CL:0002159,1.26e-35,14;CL:0002166,9.30e-28,3;CL:0000362,1.73e-20,9;CL:0000622,8.14e-17,5;CL:0002077,8.05e-15,34;CL:0000154,3.48e-14,6;CL:0000150,8.84e-10,9;CL:0000221,7.43e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002419!4.08e-26!2;UBERON:0007771!4.08e-26!2;UBERON:0003297!4.08e-26!2;UBERON:0001821!4.08e-26!2;UBERON:0003487!4.08e-26!2;UBERON:0001820!4.08e-26!2;UBERON:0005089!4.08e-26!2;UBERON:0005088!4.08e-26!2;UBERON:0000365!2.57e-23!5;UBERON:0005910!1.51e-19!6;UBERON:0001003!1.52e-14!14;UBERON:0007376!1.52e-14!14;UBERON:0007383!1.52e-14!14;UBERON:0001708!8.59e-14!4;UBERON:0001704!8.59e-14!4;UBERON:0002090!1.68e-09!6;UBERON:0006955!1.87e-07!2;UBERON:0004801!1.87e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.46e-40;2!UBERON:0007771;2.46e-40;2!UBERON:0003297;2.46e-40;2!UBERON:0001821;2.46e-40;2!UBERON:0003487;2.46e-40;2!UBERON:0001820;2.46e-40;2!UBERON:0000365;3.25e-36;5!UBERON:0005910;2.52e-30;6!UBERON:0001708;4.23e-21;4!UBERON:0008895;4.23e-21;4!UBERON:0011159;4.28e-17;5!UBERON:0000486;1.50e-15;12!UBERON:0001003;1.41e-12;15!UBERON:0007376;1.41e-12;15!UBERON:0011137;2.72e-08;11!UBERON:0010323;2.72e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.46e-40,2;UBERON:0007771,2.46e-40,2;UBERON:0003297,2.46e-40,2;UBERON:0001821,2.46e-40,2;UBERON:0003487,2.46e-40,2;UBERON:0001820,2.46e-40,2;UBERON:0005089,2.46e-40,2;UBERON:0005088,2.46e-40,2;UBERON:0000365,3.25e-36,5;UBERON:0005910,2.52e-30,6;UBERON:0001708,4.23e-21,4;UBERON:0008895,4.23e-21,4;UBERON:0011159,4.28e-17,5;UBERON:0010188,2.04e-14,6;UBERON:0002539,2.04e-14,6;UBERON:0008816,2.04e-14,6;UBERON:0001003,1.41e-12,15;UBERON:0007376,1.41e-12,15;UBERON:0007383,1.41e-12,15;UBERON:0010323,2.72e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,9.85183929633982,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.7542810236351,28.4967945457197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.74265537996172,3.25030123018261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58303223602738,0,4.87773168890343,48.4716374436684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67165076416218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@IFNK | |||
}} |
Revision as of 01:07, 23 January 2014
Short description: | p1@IFNK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFNK_5end |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | 202bp_to_AB463795, BC140280, BC141647_5end |
EntrezGene: | IFNK |
HGNC: | 21714 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 4.87e-45 | 4 |
urothelial cell | 4.87e-45 | 4 |
sebum secreting cell | 2.46e-40 | 2 |
epithelial cell of sweat gland | 2.46e-40 | 2 |
epithelial cell of skin gland | 2.46e-40 | 2 |
acinar cell of sebaceous gland | 2.46e-40 | 2 |
general ecto-epithelial cell | 1.26e-35 | 14 |
epithelial cell of Malassez | 9.30e-28 | 3 |
epidermal cell | 1.73e-20 | 9 |
acinar cell | 8.14e-17 | 5 |
ecto-epithelial cell | 8.05e-15 | 34 |
protein secreting cell | 3.48e-14 | 6 |
glandular epithelial cell | 8.84e-10 | 9 |
ectodermal cell | 7.43e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.46e-40 | 2 |
epidermis gland | 2.46e-40 | 2 |
gland of integumental system | 2.46e-40 | 2 |
sebaceous gland | 2.46e-40 | 2 |
skin sebaceous gland | 2.46e-40 | 2 |
sweat gland | 2.46e-40 | 2 |
sweat gland placode | 2.46e-40 | 2 |
sebaceous gland placode | 2.46e-40 | 2 |
urothelium | 3.25e-36 | 5 |
transitional epithelium | 2.52e-30 | 6 |
jaw skeleton | 4.23e-21 | 4 |
splanchnocranium | 4.23e-21 | 4 |
primary subdivision of cranial skeletal system | 4.28e-17 | 5 |
protuberance | 2.04e-14 | 6 |
pharyngeal arch | 2.04e-14 | 6 |
embryonic head | 2.04e-14 | 6 |
skin epidermis | 1.41e-12 | 15 |
outer epithelium | 1.41e-12 | 15 |
enveloping layer of ectoderm | 1.41e-12 | 15 |
cranial skeletal system | 2.72e-08 | 11 |