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FFCP PHASE1:Mm9::chr6:118147336..118147353,-: Difference between revisions

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{{FFCP|EntrezGene=19713|HGNC=|MCL_coexpression_id=114|UniProt=E9PZG6|association_with_transcript=0bp_to_ENSMUST00000169872_5end|description=CAGE_peak_1_at_Ret_5end|id=chr6:118147336..118147353,-|ontology_enrichment_celltype=CL:0000540!6.68e-08!33;CL:0000047!6.68e-08!33;CL:0000031!6.68e-08!33;CL:0000404!6.68e-08!33;CL:0002319!8.96e-08!43;CL:0000107!1.32e-07!9;CL:0000221!3.83e-07!44;CL:0000133!3.83e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,1.34e-08,33;CL:0000047,1.34e-08,33;CL:0000031,1.34e-08,33;CL:0000404,1.34e-08,33;CL:0002319,3.93e-08,43;CL:0000107,5.20e-08,9;CL:0000221,1.32e-07,44;CL:0000133,1.32e-07,44;CL:0000393,9.79e-07,39;CL:0000211,9.79e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.62e-10!102;UBERON:0000924!9.62e-10!102;UBERON:0006601!9.62e-10!102;UBERON:0000073!3.50e-08!75;UBERON:0001016!3.50e-08!75;UBERON:0000010!5.34e-08!11;UBERON:0001017!1.15e-07!73;UBERON:0005743!1.15e-07!73;UBERON:0002410!1.32e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.97e-08,11;UBERON:0004121,3.57e-08,95;UBERON:0000924,3.57e-08,95;UBERON:0006601,3.57e-08,95;UBERON:0002410,5.20e-08,9;UBERON:0001016,5.46e-07,75|phase1_expression=1.60148847104794,4.18770489167233,5.91499011206397,2.41971369045464,1.00179145989269,4.70061961353291,5.13947809310157,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,1.87095238332354,0,0,5.75972722056264,5.50582274561208,5.7423196411502,6.03066794622705,4.74036711908956,1.14014051673824,1.76421090831952,12.8603696180077,0,0,0,0,0,0.408338712524738,0,0,0,0.588231488031014,0,0,0,0,10.0950713688925,9.38869613217647,0,0.439372365468944,0.972149495371417,5.31948402176378,4.31257693094915,0.167782606057736,0,0,3.60163210450326,0.286533439938757,0,4.24864567805155,6.34789175126439,6.33831403506179,2.37191172448392,8.89294796111139,5.39939830368839,7.9109309005358,4.2628806896766,5.09320187881288,1.15265491596466,0.103689612308478,0.135005938331691,0,54.5593380211265,37.5476519617743,0.122490799214954,0.191690942036473,0,42.9451935897616,28.0912143787413,39.6304855801108,1.84640802822271,2.10421580285542,1.56274011167028,37.6897048651864,29.2636557216474,43.0891058730605,45.0781735774712,34.1692033917847,25.3503246322409,4.24066682665831,20.1776065485117,0,0,0,0,0.649776417447669,0,3.93244376368905,2.04516387093669,1.29893002301434,1.06001872353102,0,1.28326477414318,5.09610479413291,0,0.432982082022428,0,0.505524445014783,2.51204535381932,0.776813650941515,0.742210695324124,7.63335437770998,5.48037860961854,1.84492397804847,3.46662073271032,3.99801604261396,1.0053327306374,1.23597483867187,1.73519228303894,0,0.647067399789637,2.42925670306433,1.93950101254089,0,6.73395833126558,4.81727425670947,2.04365644166873,0,0,0,5.99162557619291,6.40500843946077,0.502617408451458,0.347648640384553,0,24.9345653471472,8.27430441645564,0.101839363850316,2.36373244159177,4.0435641349388,2.52530227063769,0.780722657776222,9.88579049063934,6.48223667299257,3.61691562805716,3.12967896096108,3.45907044769094,4.59138450342671,9.57202471734358,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0.348252166522167,0.411564272815887,1.19420560091096,0,0,0,0.621377317606506,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0,0.536546802799238,0.116765342367169,1.31647879930784,2.79084688934462,2.91847714365081,5.26319954731196,8.56245449635098,2.81833479396781,0.630869845692382,0.205809224758569,1.98251269790279,5.55346189993443,22.3952663061996,15.5598570146494,13.2733485161756,11.0925938542838,8.89512175379481,14.4571475845545,7.59246498471219,15.646400698781,19.8554814952213,20.4925166202385,15.5971269695296,6.29173586057955,4.53889904736858,4.18196673834171,10.8110703543257,10.0538691096561,7.88954149711563,7.127796474586,5.81857461502877,6.17195215034803,0.252946148497029,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0.786235980452812,0,0.202860121388503,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0.369506380333209,3.41084541186873,1.79261474086228,1.01847051465113,1.17345124144251,0.670025029767263,0.476087281772027,3.51240566144038,0.472905432318573,0.664394068946325,0.797273843287435,0.81931657357869,1.55416483679306,1.01254341007058,0,0,6.39293554924747,1.10374698521893,16.8578119487182,13.9481907044722,0,5.30188947129183,128.096337083,139.3866317139,99.0947629570875,69.7788890021452,76.865542558426,94.2644847526812,255.435552756858,211.300985269878,207.526083421925,2.24924921495265,1.41940085208269,0.712262414669021,0.325773918707152,1.15479086080775,1.32745138339963,6.5550771761845,12.6975893925195,26.4047111658257,11.2214719294694,4.61152721915891,5.16856586336442,3.99887102425256,3.56497378384721,2.52829406348653,1.05418608574999,0,0.340439605753788,0.540183282093931,1.4229455216103,1.28602221018955,1.77340233642274,8.02659679209317,8.55654907131029,12.7875278628132,1.17335854031855,0.63549621259146,9.48272111636336,4.122156323537,1.61464426695906,2.47282992205439,2.50681922406587,4.10352249362653,13.1166376483433,33.9328302679233,0.170870880797853,2.27025554759545,0.185194527369712,0,0,0,0.169978429993855,0.279902904647316,0,0.954670618015114,20.8781755763549,12.1991680276109,9.82848601478391,7.52717865652087,8.7345025498471,7.55240339754996,7.43881101528023,4.71160695571253,4.40690909192096,47.2217877946063,0.56369293868419,0.299033092087958,1.32366792365678,0.388902376688095,0,0,0.469428954583016,4.81756223922615,3.98465508817701,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0.443068581523732,0.100966449948148,0.0762068066549998,0.403304740547362,0.487289403698762,0.481059208201647,0.350630706544707,1.13365191807606,0.221985953374065,1.16628013592318,0.671538465456314,5.02292944483695,1.87682475451182,8.42497471629419,1.92931541171159,2.00628841614145,0.564751842617067,0.460325236507177,3.43737308063638,1.89038500578056,1.37016503954128,0.755393897389701,2.70009000092722,0.900642406448441,2.26571204492102,0.51776031175182,1.3492355185943,4.78829848081237,4.43907374960749,4.86213434136588,2.30574478890781,2.94149613520023,5.55616819504038,2.88449080134452,4.49286893428541,5.81203587056734,4.56262739802432,4.52703219326583,3.65201879132541,3.77748399188729,3.61843454420364,6.19181798667996,4.05595140806994,3.27945674788299,4.94503080963968,3.97437084362873,2.05721551431249,3.54951612318675,3.33810665926249,3.0522747492789,3.95259397744389,4.39995961036718,3.47563148458268,3.94604567156764,4.6173398707593,3.36685362994643,3.79632057997357,2.65962102414021,4.09231043169689,4.64810523557898,3.85813221962283,4.24677982494508,5.84829021113521,5.15690529715916,4.01705497344571,5.29419405886837,8.34724208233517|short_description=p1@Ret}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:19713
|HGNC=
|MCL_coexpression_id=114
|TSSclassifier=NA
|UniProt=uniprot:E9PZG6
|association_with_transcript=0bp_to_ENSMUST00000169872_5end
|cluster_id=chr6:118147336..118147353,-
|description=CAGE_peak_1_at_Ret_5end
|id=chr6:118147336..118147353,-
|ontology_enrichment_celltype=CL:0000540!6.68e-08!33;CL:0000047!6.68e-08!33;CL:0000031!6.68e-08!33;CL:0000404!6.68e-08!33;CL:0002319!8.96e-08!43;CL:0000107!1.32e-07!9;CL:0000221!3.83e-07!44;CL:0000133!3.83e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000540,1.34e-08,33;CL:0000047,1.34e-08,33;CL:0000031,1.34e-08,33;CL:0000404,1.34e-08,33;CL:0002319,3.93e-08,43;CL:0000107,5.20e-08,9;CL:0000221,1.32e-07,44;CL:0000133,1.32e-07,44;CL:0000393,9.79e-07,39;CL:0000211,9.79e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!9.62e-10!102;UBERON:0000924!9.62e-10!102;UBERON:0006601!9.62e-10!102;UBERON:0000073!3.50e-08!75;UBERON:0001016!3.50e-08!75;UBERON:0000010!5.34e-08!11;UBERON:0001017!1.15e-07!73;UBERON:0005743!1.15e-07!73;UBERON:0002410!1.32e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.97e-08,11;UBERON:0004121,3.57e-08,95;UBERON:0000924,3.57e-08,95;UBERON:0006601,3.57e-08,95;UBERON:0002410,5.20e-08,9;UBERON:0001016,5.46e-07,75
|phase1_expression=1.60148847104794,4.18770489167233,5.91499011206397,2.41971369045464,1.00179145989269,4.70061961353291,5.13947809310157,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,1.87095238332354,0,0,5.75972722056264,5.50582274561208,5.7423196411502,6.03066794622705,4.74036711908956,1.14014051673824,1.76421090831952,12.8603696180077,0,0,0,0,0,0.408338712524738,0,0,0,0.588231488031014,0,0,0,0,10.0950713688925,9.38869613217647,0,0.439372365468944,0.972149495371417,5.31948402176378,4.31257693094915,0.167782606057736,0,0,3.60163210450326,0.286533439938757,0,4.24864567805155,6.34789175126439,6.33831403506179,2.37191172448392,8.89294796111139,5.39939830368839,7.9109309005358,4.2628806896766,5.09320187881288,1.15265491596466,0.103689612308478,0.135005938331691,0,54.5593380211265,37.5476519617743,0.122490799214954,0.191690942036473,0,42.9451935897616,28.0912143787413,39.6304855801108,1.84640802822271,2.10421580285542,1.56274011167028,37.6897048651864,29.2636557216474,43.0891058730605,45.0781735774712,34.1692033917847,25.3503246322409,4.24066682665831,20.1776065485117,0,0,0,0,0.649776417447669,0,3.93244376368905,2.04516387093669,1.29893002301434,1.06001872353102,0,1.28326477414318,5.09610479413291,0,0.432982082022428,0,0.505524445014783,2.51204535381932,0.776813650941515,0.742210695324124,7.63335437770998,5.48037860961854,1.84492397804847,3.46662073271032,3.99801604261396,1.0053327306374,1.23597483867187,1.73519228303894,0,0.647067399789637,2.42925670306433,1.93950101254089,0,6.73395833126558,4.81727425670947,2.04365644166873,0,0,0,5.99162557619291,6.40500843946077,0.502617408451458,0.347648640384553,0,24.9345653471472,8.27430441645564,0.101839363850316,2.36373244159177,4.0435641349388,2.52530227063769,0.780722657776222,9.88579049063934,6.48223667299257,3.61691562805716,3.12967896096108,3.45907044769094,4.59138450342671,9.57202471734358,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0.348252166522167,0.411564272815887,1.19420560091096,0,0,0,0.621377317606506,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0,0.536546802799238,0.116765342367169,1.31647879930784,2.79084688934462,2.91847714365081,5.26319954731196,8.56245449635098,2.81833479396781,0.630869845692382,0.205809224758569,1.98251269790279,5.55346189993443,22.3952663061996,15.5598570146494,13.2733485161756,11.0925938542838,8.89512175379481,14.4571475845545,7.59246498471219,15.646400698781,19.8554814952213,20.4925166202385,15.5971269695296,6.29173586057955,4.53889904736858,4.18196673834171,10.8110703543257,10.0538691096561,7.88954149711563,7.127796474586,5.81857461502877,6.17195215034803,0.252946148497029,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0.786235980452812,0,0.202860121388503,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0.369506380333209,3.41084541186873,1.79261474086228,1.01847051465113,1.17345124144251,0.670025029767263,0.476087281772027,3.51240566144038,0.472905432318573,0.664394068946325,0.797273843287435,0.81931657357869,1.55416483679306,1.01254341007058,0,0,6.39293554924747,1.10374698521893,16.8578119487182,13.9481907044722,0,5.30188947129183,128.096337083,139.3866317139,99.0947629570875,69.7788890021452,76.865542558426,94.2644847526812,255.435552756858,211.300985269878,207.526083421925,2.24924921495265,1.41940085208269,0.712262414669021,0.325773918707152,1.15479086080775,1.32745138339963,6.5550771761845,12.6975893925195,26.4047111658257,11.2214719294694,4.61152721915891,5.16856586336442,3.99887102425256,3.56497378384721,2.52829406348653,1.05418608574999,0,0.340439605753788,0.540183282093931,1.4229455216103,1.28602221018955,1.77340233642274,8.02659679209317,8.55654907131029,12.7875278628132,1.17335854031855,0.63549621259146,9.48272111636336,4.122156323537,1.61464426695906,2.47282992205439,2.50681922406587,4.10352249362653,13.1166376483433,33.9328302679233,0.170870880797853,2.27025554759545,0.185194527369712,0,0,0,0.169978429993855,0.279902904647316,0,0.954670618015114,20.8781755763549,12.1991680276109,9.82848601478391,7.52717865652087,8.7345025498471,7.55240339754996,7.43881101528023,4.71160695571253,4.40690909192096,47.2217877946063,0.56369293868419,0.299033092087958,1.32366792365678,0.388902376688095,0,0,0.469428954583016,4.81756223922615,3.98465508817701,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0.443068581523732,0.100966449948148,0.0762068066549998,0.403304740547362,0.487289403698762,0.481059208201647,0.350630706544707,1.13365191807606,0.221985953374065,1.16628013592318,0.671538465456314,5.02292944483695,1.87682475451182,8.42497471629419,1.92931541171159,2.00628841614145,0.564751842617067,0.460325236507177,3.43737308063638,1.89038500578056,1.37016503954128,0.755393897389701,2.70009000092722,0.900642406448441,2.26571204492102,0.51776031175182,1.3492355185943,4.78829848081237,4.43907374960749,4.86213434136588,2.30574478890781,2.94149613520023,5.55616819504038,2.88449080134452,4.4928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|short_description=p1@Ret
}}

Revision as of 23:59, 4 August 2015

Short description:p1@Ret
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ret_5end
Coexpression cluster:MCL_coexpression_mm9:114
Association with transcript: 0bp_to_ENSMUST00000169872_5end
EntrezGene:19713
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Ret

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I24.74
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F154.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.63
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.69
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I643.09
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D645.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F634.17
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.35
Mouse Schwann, donor1.CNhs12507.11728-123D94.24
Mouse Schwann, donor2.CNhs12573.11746-123F920.18
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C57.63
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F224.93
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E29.89
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A29.57
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G12.92
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D38.56
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I522.40
intestine, embryo E13.CNhs11010.381-16D515.56
intestine, embryo E15.CNhs10602.976-16D813.27
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D38.90
intestine, embryo E18.CNhs10526.1289-20F714.46
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E915.65
intestine, neonate N06.CNhs11102.688-20B819.86
intestine, neonate N07.CNhs11095.720-20F220.49
intestine, neonate N10.CNhs11098.755-23A515.60
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I910.81
kidney, embryo E15.CNhs10997.434-16F810.05
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I27.13
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G76.17
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C216.86
medulla oblongata, neonate N30.CNhs11200.1396-42A313.95
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1128.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2139.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E399.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D769.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D876.87
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D994.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4255.44
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5211.30
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6207.53
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F46.56
pancreas, embryo E15.CNhs11042.1556-45F212.70
pancreas, embryo E16.CNhs11003.460-26E526.40
pancreas, embryo E17.CNhs10599.1558-45G311.22
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F58.56
pituitary gland, neonate N00.CNhs11190.1308-22E912.79
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F89.48
skin, adult.CNhs10492.30-1C34.12
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I113.12
spinal cord, adult.CNhs10505.24-13C933.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E320.88
stomach, embryo E15.CNhs10603.1252-16G812.20
stomach, embryo E16.CNhs11022.459-17D49.83
stomach, embryo E17.CNhs11006.1035-18D57.53
stomach, embryo E18.CNhs10999.1286-20C68.73
stomach, neonate N03.CNhs11193.1340-24B87.55
stomach, neonate N07.CNhs11210.718-18A97.44
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C147.22
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I44.82
testis, neonate N10.CNhs11204.763-44D93.98
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E58.42
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B48.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.34e-0833
neuronal stem cell1.34e-0833
neuroblast1.34e-0833
electrically signaling cell1.34e-0833
neural cell3.93e-0843
autonomic neuron5.20e-089
ectodermal cell1.32e-0744
neurectodermal cell1.32e-0744
electrically responsive cell9.79e-0739
electrically active cell9.79e-0739

Uber anatomy
Ontology termp-valuen
peripheral nervous system1.97e-0811
ectoderm-derived structure3.57e-0895
ectoderm3.57e-0895
presumptive ectoderm3.57e-0895
autonomic nervous system5.20e-089
nervous system5.46e-0775
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