FFCP PHASE1:Mm9::chr6:117124210..117124225,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=134|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:117124210..117124225,+|id=chr6:117124210..117124225,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,2.41e-15,3;CL:0000359,2.41e-15,3;CL:0002539,2.41e-15,3;CL:0000514,2.41e-15,3;CL:0000680,3.71e-08,6;CL:0000187,3.71e-08,6;CL:0000056,3.71e-08,6;CL:0000222,4.05e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.41e-15,3;UBERON:0004237,2.41e-15,3;UBERON:0004695,2.41e-15,3;UBERON:0002111,2.41e-15,3;UBERON:0004178,2.41e-15,3;UBERON:0000947,9.19e-12,4;UBERON:0001637,9.19e-12,4;UBERON:0004573,9.19e-12,4;UBERON:0003509,9.19e-12,4;UBERON:0004571,9.19e-12,4;UBERON:0010191,9.19e-12,4;UBERON:0004572,9.19e-12,4;UBERON:0000055,1.33e-09,5;UBERON:0007500,1.33e-09,5;UBERON:0001981,1.33e-09,5;UBERON:0002049,1.33e-09,5;UBERON:0007798,1.33e-09,5;UBERON:0004537,1.33e-09,5;UBERON:0006965,1.33e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.31790010585369,2.75320128242522,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29955283489534,0,0.140444420131752,5.11290967734173,13.2490862347463,12.0135455333516,0,0,7.64415719119937,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0.740778109478847,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0.58678619322877,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0.464810523557898,0,0,0,0,0,0,0.231867835620421|short_description=p@chr6:117124210..117124225,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=134 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:117124210..117124225,+ | |||
|description=CAGE_peak_at_chr6:117124210..117124225,+ | |||
|id=chr6:117124210..117124225,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.41e-15,3;CL:0000359,2.41e-15,3;CL:0002539,2.41e-15,3;CL:0000514,2.41e-15,3;CL:0000680,3.71e-08,6;CL:0000187,3.71e-08,6;CL:0000056,3.71e-08,6;CL:0000222,4.05e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.41e-15,3;UBERON:0004237,2.41e-15,3;UBERON:0004695,2.41e-15,3;UBERON:0002111,2.41e-15,3;UBERON:0004178,2.41e-15,3;UBERON:0000947,9.19e-12,4;UBERON:0001637,9.19e-12,4;UBERON:0004573,9.19e-12,4;UBERON:0003509,9.19e-12,4;UBERON:0004571,9.19e-12,4;UBERON:0010191,9.19e-12,4;UBERON:0004572,9.19e-12,4;UBERON:0000055,1.33e-09,5;UBERON:0007500,1.33e-09,5;UBERON:0001981,1.33e-09,5;UBERON:0002049,1.33e-09,5;UBERON:0007798,1.33e-09,5;UBERON:0004537,1.33e-09,5;UBERON:0006965,1.33e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.31790010585369,2.75320128242522,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29955283489534,0,0.140444420131752,5.11290967734173,13.2490862347463,12.0135455333516,0,0,7.64415719119937,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0.740778109478847,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0.58678619322877,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0.464810523557898,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr6:117124210..117124225,+ | |||
}} |
Latest revision as of 23:37, 4 August 2015
Short description: | p@chr6:117124210..117124225, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117124210..117124225, + |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.41e-15 | 3 |
vascular associated smooth muscle cell | 2.41e-15 | 3 |
aortic smooth muscle cell | 2.41e-15 | 3 |
smooth muscle myoblast | 2.41e-15 | 3 |
muscle precursor cell | 3.71e-08 | 6 |
muscle cell | 3.71e-08 | 6 |
myoblast | 3.71e-08 | 6 |
mesodermal cell | 4.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.41e-15 | 3 |
blood vessel smooth muscle | 2.41e-15 | 3 |
arterial system smooth muscle | 2.41e-15 | 3 |
artery smooth muscle tissue | 2.41e-15 | 3 |
aorta smooth muscle tissue | 2.41e-15 | 3 |
aorta | 9.19e-12 | 4 |
artery | 9.19e-12 | 4 |
systemic artery | 9.19e-12 | 4 |
arterial blood vessel | 9.19e-12 | 4 |
systemic arterial system | 9.19e-12 | 4 |
aortic system | 9.19e-12 | 4 |
arterial system | 9.19e-12 | 4 |
vessel | 1.33e-09 | 5 |
epithelial tube open at both ends | 1.33e-09 | 5 |
blood vessel | 1.33e-09 | 5 |
vasculature | 1.33e-09 | 5 |
vascular system | 1.33e-09 | 5 |
blood vasculature | 1.33e-09 | 5 |
vascular cord | 1.33e-09 | 5 |