FFCP PHASE1:Hg19::chr9:140500087..140500123,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92714 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28633 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N5I2,Q59FD7 | |||
|association_with_transcript=0bp_to_ENST00000371421,NM_152285,uc004cnp.1,uc004cnq.1,uc004cns.2,uc004cnt.2,uc004cnu.2,uc004cnv.2,uc004cnw.2,uc011mfb.1_5end | |||
|description=CAGE_peak_2_at_ARRDC1_5end | |||
|id=chr9:140500087..140500123,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.48e-15!140;CL:0002087!2.05e-11!119;CL:0000037!6.01e-11!172;CL:0000566!6.01e-11!172;CL:0000988!1.71e-10!182;CL:0002031!3.47e-10!124;CL:0002032!1.05e-09!165;CL:0000837!1.05e-09!165;CL:0000791!1.51e-09!18;CL:0000789!1.51e-09!18;CL:0002420!1.51e-09!18;CL:0002419!1.51e-09!18;CL:0000790!1.51e-09!18;CL:0000838!2.36e-08!52;CL:0000542!3.59e-08!53;CL:0000051!3.59e-08!53;CL:0000084!5.33e-07!25;CL:0000827!5.33e-07!25;CL:0000625!6.29e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.45e-09;18!CL:0000789;1.45e-09;18!CL:0002419;1.45e-09;18!CL:1000449;3.59e-07;15!CL:0000084;4.36e-07;25!CL:0000625;5.28e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.24e-15,136;CL:0002087,1.61e-11,115;CL:0000037,5.78e-11,168;CL:0000988,2.82e-10,177;CL:0002031,2.95e-10,120;CL:0002032,1.02e-09,161;CL:0000837,1.02e-09,161;CL:0000791,1.51e-09,18;CL:0000789,1.51e-09,18;CL:0002420,1.51e-09,18;CL:0002419,1.51e-09,18;CL:0000790,1.51e-09,18;CL:0000838,2.36e-08,52;CL:0000542,3.59e-08,53;CL:0000051,3.59e-08,53;CL:1000449,4.85e-07,15;CL:0000084,5.33e-07,25;CL:0000827,5.33e-07,25;CL:0000625,6.29e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.45e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.54e-09!216;UBERON:0002193!6.08e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.59e-07;15!UBERON:0004819;3.59e-07;15!UBERON:0001285;3.59e-07;15!UBERON:0007684;3.59e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.51e-08,108;UBERON:0003081,1.70e-07,203;UBERON:0004211,4.85e-07,15;UBERON:0009773,4.85e-07,15;UBERON:0001231,4.85e-07,15;UBERON:0001285,4.85e-07,15;UBERON:0007684,4.85e-07,15;UBERON:0004208,4.85e-07,15;UBERON:0006555,8.79e-07,16;UBERON:0004819,8.79e-07,16 | |||
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| |||
|short_description=p2@ARRDC1 | |||
}} |
Revision as of 04:21, 23 January 2014
Short description: | p2@ARRDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARRDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371421, NM_152285, uc004cnp.1, uc004cnq.1, uc004cns.2, uc004cnt.2, uc004cnu.2, uc004cnv.2, uc004cnw.2, uc011mfb.1_5end |
EntrezGene: | ARRDC1 |
HGNC: | 28633 |
UniProt: | Q8N5I2Q59FD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.24e-15 | 136 |
nongranular leukocyte | 1.61e-11 | 115 |
hematopoietic stem cell | 5.78e-11 | 168 |
hematopoietic cell | 2.82e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 2.95e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.02e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-09 | 161 |
mature alpha-beta T cell | 1.51e-09 | 18 |
alpha-beta T cell | 1.51e-09 | 18 |
immature T cell | 1.51e-09 | 18 |
mature T cell | 1.51e-09 | 18 |
immature alpha-beta T cell | 1.51e-09 | 18 |
lymphoid lineage restricted progenitor cell | 2.36e-08 | 52 |
lymphocyte | 3.59e-08 | 53 |
common lymphoid progenitor | 3.59e-08 | 53 |
epithelial cell of nephron | 4.85e-07 | 15 |
T cell | 5.33e-07 | 25 |
pro-T cell | 5.33e-07 | 25 |
CD8-positive, alpha-beta T cell | 6.29e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.51e-08 | 108 |
lateral plate mesoderm | 1.70e-07 | 203 |
nephron epithelium | 4.85e-07 | 15 |
renal tubule | 4.85e-07 | 15 |
nephron tubule | 4.85e-07 | 15 |
nephron | 4.85e-07 | 15 |
uriniferous tubule | 4.85e-07 | 15 |
nephrogenic mesenchyme | 4.85e-07 | 15 |
excretory tube | 8.79e-07 | 16 |
kidney epithelium | 8.79e-07 | 16 |