FFCP PHASE1:Hg19::chr9:140064363..140064375,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31409 | |||
|TSSclassifier=strong | |||
|UniProt=Q2I0M4 | |||
|association_with_transcript=51bp_to_DQ355157_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_2_at_LRRC26_5end | |||
|id=chr9:140064363..140064375,- | |||
|ontology_enrichment_celltype=CL:0000784!4.88e-15!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.66e-43;3!CL:0000037;2.75e-15;1!CL:0001024;2.75e-15;1!CL:0000451;2.21e-12;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.66e-43,3;CL:0001024,2.75e-15,1;CL:0000451,2.21e-12,10 | |||
|ontology_enrichment_development_v019=UBERON:0008801;6.44e-16;1!UBERON:0006298;7.46e-16;1!UBERON:0005754;1.34e-15;1!UBERON:0008425;1.66e-15;1!UBERON:0007297;1.86e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!2.24e-11!10;UBERON:0001829!1.06e-10!2;UBERON:0003127!2.66e-10!2;UBERON:0000341!7.52e-10!2;UBERON:0006562!7.96e-10!11;UBERON:0007023!1.15e-09!115;UBERON:0004921!4.67e-09!129;UBERON:0004185!4.67e-09!129;UBERON:0001044!8.27e-08!6;UBERON:0003293!8.27e-08!6;UBERON:0003294!8.27e-08!6;UBERON:0010047!8.27e-08!6;UBERON:0000167!8.27e-08!6;UBERON:0001004!9.35e-08!72;UBERON:0006947!3.01e-07!3;UBERON:0004054!3.01e-07!3;UBERON:0001042!3.12e-07!10;UBERON:0009145!3.12e-07!10;UBERON:0000974!3.88e-07!10;UBERON:0001007!7.97e-07!155;UBERON:0001555!7.97e-07!155;UBERON:0007026!7.97e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;6.01e-30;2!UBERON:0003127;9.30e-29;2!UBERON:0001044;1.97e-22;6!UBERON:0003293;1.97e-22;6!UBERON:0003294;1.97e-22;6!UBERON:0010047;1.97e-22;6!UBERON:0003408;1.97e-22;6!UBERON:0000167;1.97e-22;6!UBERON:0006947;6.82e-20;3!UBERON:0004054;6.82e-20;3!UBERON:0001831;6.44e-16;1!UBERON:0001567;6.44e-16;1!UBERON:0001736;7.46e-16;1!UBERON:0000998;1.34e-15;1!UBERON:0006868;1.34e-15;1!UBERON:0001000;1.66e-15;1!UBERON:0005352;1.66e-15;1!UBERON:0002372;2.75e-15;1!UBERON:0001961;2.75e-15;1!UBERON:0001744;2.75e-15;1!UBERON:0001042;2.75e-15;1!UBERON:0001735;2.75e-15;1!UBERON:0005904;3.54e-15;4!UBERON:0000161;1.99e-12;19!UBERON:0000166;1.99e-12;19!UBERON:0001041;5.70e-10;14!UBERON:0004921;2.63e-09;33!UBERON:0003126;6.31e-09;7!UBERON:0001005;6.31e-09;7!UBERON:0004089;1.29e-08;2!UBERON:0000165;1.64e-08;28!UBERON:0006562;2.67e-08;2!UBERON:0002365;1.13e-07;31!UBERON:0002330;1.13e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.02e-30,2;UBERON:0003127,1.07e-28,2;UBERON:0001044,1.97e-22,6;UBERON:0003293,1.97e-22,6;UBERON:0003294,1.97e-22,6;UBERON:0010047,1.97e-22,6;UBERON:0000167,1.97e-22,6;UBERON:0006947,7.16e-20,3;UBERON:0004054,7.16e-20,3;UBERON:0001831,6.44e-16,1;UBERON:0001567,6.44e-16,1;UBERON:0008801,6.44e-16,1;UBERON:0001736,7.46e-16,1;UBERON:0006298,7.46e-16,1;UBERON:0000998,1.34e-15,1;UBERON:0006868,1.34e-15,1;UBERON:0001000,1.78e-15,1;UBERON:0005352,1.78e-15,1;UBERON:0002372,3.17e-15,1;UBERON:0001961,3.17e-15,1;UBERON:0001744,3.17e-15,1;UBERON:0001735,3.17e-15,1;UBERON:0005904,3.67e-15,4;UBERON:0003408,1.00e-13,10;UBERON:0000166,9.29e-11,22;UBERON:0003126,6.56e-09,7;UBERON:0001005,6.56e-09,7;UBERON:0004089,1.29e-08,2;UBERON:0000165,3.22e-08,29;UBERON:0000930,3.22e-08,29;UBERON:0002365,9.70e-08,31;UBERON:0002330,9.70e-08,31;UBERON:0007023,2.91e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05434061319081,5.14795419702115,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44887999989348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,2.36750641709634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.22386650285773,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.627944742804112,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4765934057881,0,0,3.38709640152743,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.452888530700021,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79839781787719,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.639701945702943,0.23806443146374,0.322944549180031,0.124149428591716,0,0,0,0.435433495793923,0,1.0776328482334,1.07583308089015,1.66330178273007,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@LRRC26 | |||
}} |
Revision as of 04:18, 23 January 2014
Short description: | p2@LRRC26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRC26_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 51bp_to_DQ355157_5end |
EntrezGene: | LRRC26 |
HGNC: | 31409 |
UniProt: | Q2I0M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.66e-43 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.75e-15 | 1 |
dendritic cell | 2.21e-12 | 10 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 6.02e-30 | 2 |
open tracheal system trachea | 1.07e-28 | 2 |
saliva-secreting gland | 1.97e-22 | 6 |
gland of oral region | 1.97e-22 | 6 |
gland of foregut | 1.97e-22 | 6 |
oral gland | 1.97e-22 | 6 |
oral cavity | 1.97e-22 | 6 |
male genital duct | 7.16e-20 | 3 |
internal male genitalia | 7.16e-20 | 3 |
parotid gland | 6.44e-16 | 1 |
cheek | 6.44e-16 | 1 |
parotid gland primordium | 6.44e-16 | 1 |
submandibular gland | 7.46e-16 | 1 |
submandibular gland primordium | 7.46e-16 | 1 |
seminal vesicle | 1.34e-15 | 1 |
seminal fluid secreting gland | 1.34e-15 | 1 |
vas deferens | 1.78e-15 | 1 |
spermatic cord | 1.78e-15 | 1 |
tonsil | 3.17e-15 | 1 |
mucosa-associated lymphoid tissue | 3.17e-15 | 1 |
lymphoid tissue | 3.17e-15 | 1 |
tonsillar ring | 3.17e-15 | 1 |
duct of male reproductive system | 3.67e-15 | 4 |
gland of gut | 1.00e-13 | 10 |
oral opening | 9.29e-11 | 22 |
trachea | 6.56e-09 | 7 |
respiratory airway | 6.56e-09 | 7 |
midface | 1.29e-08 | 2 |
mouth | 3.22e-08 | 29 |
stomodeum | 3.22e-08 | 29 |
exocrine gland | 9.70e-08 | 31 |
exocrine system | 9.70e-08 | 31 |
adult organism | 2.91e-07 | 114 |