FFCP PHASE1:Hg19::chr9:139636433..139636481,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=414332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20892 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000494294,ENST00000529013_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_1_at_LCN10_5end | |||
|id=chr9:139636433..139636481,- | |||
|ontology_enrichment_celltype=CL:0000542!1.82e-26!53;CL:0000051!1.82e-26!53;CL:0000838!2.16e-25!52;CL:0000945!1.85e-19!24;CL:0000826!1.85e-19!24;CL:0000236!1.19e-16!14;CL:0000791!1.65e-11!18;CL:0000789!1.65e-11!18;CL:0002420!1.65e-11!18;CL:0002419!1.65e-11!18;CL:0000790!1.65e-11!18;CL:0002087!6.13e-10!119;CL:0000738!1.72e-09!140;CL:0002031!2.90e-09!124;CL:0000084!3.24e-09!25;CL:0000827!3.24e-09!25;CL:0000625!5.00e-09!11;CL:0000080!1.39e-07!6;CL:0000988!6.54e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.06e-31;13!CL:0000945;1.65e-30;24!CL:0000542;9.37e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.15e-33,14;CL:0000945,1.18e-30,24;CL:0000826,1.18e-30,24;CL:0000542,6.02e-18,53;CL:0000051,6.02e-18,53;CL:0000838,1.78e-16,52 | |||
|ontology_enrichment_development_v019=CL:0000051;9.37e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.40e-49!115;UBERON:0000178!7.22e-15!15;UBERON:0000179!7.22e-15!15;UBERON:0000463!7.22e-15!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.69e-19;15!UBERON:0000179;1.69e-19;15!UBERON:0000463;1.69e-19;15!UBERON:0002390;6.61e-11;32!UBERON:0006947;6.89e-09;3!UBERON:0004054;6.89e-09;3!UBERON:0003978;1.23e-08;3!UBERON:0000946;1.23e-08;3!UBERON:0002193;4.60e-07;42!UBERON:0007023;6.27e-07;114!UBERON:0005904;9.42e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.26e-22,114;UBERON:0000178,1.62e-19,15;UBERON:0000179,1.62e-19,15;UBERON:0000463,1.62e-19,15;UBERON:0006947,8.25e-09,3;UBERON:0004054,8.25e-09,3;UBERON:0003978,1.41e-08,3;UBERON:0009751,1.41e-08,3;UBERON:0000946,1.41e-08,3;UBERON:0002523,1.41e-08,3;UBERON:0005983,1.41e-08,3;UBERON:0002165,1.41e-08,3;UBERON:0002062,1.41e-08,3;UBERON:0007280,1.41e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,1.64201178899891,1.33808328233255,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,29.9193615584249,31.6760394532036,31.1328238852244,30.297845802222,32.832470936953,26.4386122379062,29.7470192753188,37.2080964268792,6.26134266020393,2.34894875748376,5.73409842187843,2.64342657158052,0,0,0.786839080455332,0,0.205601498999509,0.167186495390678,1.95553359980154,0.946895611469467,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0.766440987203842,0,0,0.637130828648193,0.651083453856419,0.950452044448374,0.451725357233318,0.895906278080929,1.24930726552346,0.473554504088034,0.821127996921047,0.604820229674197,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,27.7819674824635,36.1741083076573,50.2444885036992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,5.66725564062472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,4.9896214411693,0,0,0,0,0.507447609232169,1.52927441428475,3.98753031021914,4.2881719582402,2.05681136543097,1.94541993357815,2.16012574895246,1.58625035258854,0,0,0,3.71606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,0,0.796991953004279,6.63081397274754,10.3292426620253,0,2.8309505256046,0,0.0898683511473268,0,0,1.38100767891707,0,0,0,0.371072392647405,0,0,0,10.1499940560871,0,0,0,0,0,0,0,0.844175070377856,0,0.110579259931225,0,0.658156191461918,0,0,1.46205491157214,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0,0.995261931078505,0.353830258013357,2.4441205797345,8.59911273173804,3.21266241260907,3.65476823269094,0,0,0,2.18945747058799,0,0,4.3404284313433,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,4.71762004253481,0,0,0,0,1.35784623083787,0,0,0,0,0.0633107959558787,0,0,1.28071796843612,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,1.11712960508902,1.60412296808179,11.485968393229,0.798716001995964,0,2.00854311697685,0.268733889946905,0,0,0,0.0824158583811665,0.202210631562555,0,1.86281330544726,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.681909645754975,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.19009341568421,0,0,0.533937062838473,0,1.24271716604159,5.45782623993146,0,0.365377795142688,0,0,0,0,0,0,0,0,0.250381861413,0,0.887432412294818,0.18628920882415,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.552032215008773,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.317079050969534,0,1.64477330057155,0.992422356778588,0,0,0,0,0,0,0,3.11131766400604,0,0.135939465953663,0.197318320688547,0,0,1.80534113556182,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,1.27016115057279,0,0,0,0,0.098150233615243,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,1.50962843566674,0.540219106755613,0.218559560503957,1.88126918544609,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,3.57138888323444,3.6740996144939,0,0,0,0,0,1.83491713361816,0.286679166302903,0,0.203974470572744,0,1.5870805215462,0,0,0,0,0,0.126698501011437,0,0,0,0,0.606229585745915,1.07185652062471,0,0.310298987585686,1.0661699095049,0,0.129177819672012,0.496597714366863,0,7.70130615165795,1.41482032270754,0.870866991587845,0,4.04112318087525,0.78894425931944,0,0,0,0,0,0,1.71138021856013,0.406896178315738,19.9727032255654,8.85604691800515,0.320568492303233 | |||
|short_description=p1@LCN10 | |||
}} |
Revision as of 04:09, 23 January 2014
Short description: | p1@LCN10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LCN10_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_ENST00000494294, ENST00000529013_5end |
EntrezGene: | LCN10 |
HGNC: | 20892 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.15e-33 | 14 |
lymphocyte of B lineage | 1.18e-30 | 24 |
pro-B cell | 1.18e-30 | 24 |
lymphocyte | 6.02e-18 | 53 |
common lymphoid progenitor | 6.02e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.78e-16 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.26e-22 | 114 |
blood | 1.62e-19 | 15 |
haemolymphatic fluid | 1.62e-19 | 15 |
organism substance | 1.62e-19 | 15 |
male genital duct | 8.25e-09 | 3 |
internal male genitalia | 8.25e-09 | 3 |
valve | 1.41e-08 | 3 |
cardiac mesenchyme | 1.41e-08 | 3 |
cardial valve | 1.41e-08 | 3 |
tunica intima | 1.41e-08 | 3 |
heart layer | 1.41e-08 | 3 |
endocardium | 1.41e-08 | 3 |
endocardial cushion | 1.41e-08 | 3 |
presumptive endocardium | 1.41e-08 | 3 |