FFCP PHASE1:Hg19::chr9:113800847..113800856,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |||
|TSSclassifier=strong | |||
|UniProt=B1AP63 | |||
|association_with_transcript=-109bp_to_ENST00000441240_5end | |||
|description=CAGE_peak_21_at_LPAR1_5end | |||
|id=chr9:113800847..113800856,- | |||
|ontology_enrichment_celltype=CL:0000057!1.55e-10!75;CL:0000055!8.89e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0002552;6.40e-14;5!CL:0000499;1.79e-08;28!CL:0000135;6.80e-08;3!CL:0000388;6.80e-08;3!CL:0002556;1.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,7.62e-14,5;CL:0000499,1.02e-08,28;CL:0000135,2.23e-08,3;CL:0000388,2.23e-08,3;CL:0002556,1.20e-07,6;CL:0000136,1.79e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.16e-15!365;UBERON:0000468!5.21e-13!659;UBERON:0007023!1.20e-12!115;UBERON:0003102!3.01e-11!95;UBERON:0000914!7.66e-11!83;UBERON:0002329!7.66e-11!83;UBERON:0003077!7.66e-11!83;UBERON:0003059!7.66e-11!83;UBERON:0007282!7.66e-11!83;UBERON:0009618!7.66e-11!83;UBERON:0007285!7.66e-11!83;UBERON:0000467!5.52e-10!625;UBERON:0000480!7.61e-10!626;UBERON:0002050!9.38e-09!605;UBERON:0005423!9.38e-09!605;UBERON:0000481!1.01e-08!347;UBERON:0000922!1.29e-08!612;UBERON:0000923!1.76e-08!604;UBERON:0005291!1.76e-08!604;UBERON:0006598!1.76e-08!604;UBERON:0002532!1.76e-08!604;UBERON:0000062!1.17e-07!511;UBERON:0005256!1.24e-07!143;UBERON:0000486!1.26e-07!82;UBERON:0004290!4.39e-07!70;UBERON:0000033!6.38e-07!123;UBERON:0001049!7.31e-07!57;UBERON:0005068!7.31e-07!57;UBERON:0006241!7.31e-07!57;UBERON:0007135!7.31e-07!57;UBERON:0000153!7.88e-07!129;UBERON:0007811!7.88e-07!129;UBERON:0002100!8.24e-07!216;UBERON:0000479!8.65e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001828;1.62e-08;8!UBERON:0007846;6.80e-08;3!UBERON:0000043;6.80e-08;3!UBERON:0007845;6.80e-08;3!UBERON:0001758;1.43e-07;6!UBERON:0003672;1.43e-07;6!UBERON:0000075;1.96e-07;16!UBERON:0004457;4.37e-07;9!UBERON:0000042;4.37e-07;9!UBERON:0002420;5.30e-07;9!UBERON:0000125;5.30e-07;9!UBERON:0007245;5.30e-07;9!UBERON:0002308;5.30e-07;9!UBERON:0010009;5.30e-07;9!UBERON:0010011;5.30e-07;9!UBERON:0000454;5.30e-07;9!UBERON:0001434;6.70e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.10e-09,171;UBERON:0000924,2.10e-09,171;UBERON:0006601,2.10e-09,171;UBERON:0010371,4.24e-09,104;UBERON:0003075,1.11e-08,82;UBERON:0007284,1.11e-08,82;UBERON:0001828,1.80e-08,8;UBERON:0007846,2.23e-08,3;UBERON:0000043,2.23e-08,3;UBERON:0007845,2.23e-08,3;UBERON:0001049,3.38e-08,56;UBERON:0005068,3.38e-08,56;UBERON:0006241,3.38e-08,56;UBERON:0007135,3.38e-08,56;UBERON:0002346,4.79e-08,86;UBERON:0003102,7.32e-08,99;UBERON:0000073,9.67e-08,53;UBERON:0002616,9.67e-08,53;UBERON:0001758,1.20e-07,6;UBERON:0003672,1.20e-07,6;UBERON:0000075,1.35e-07,16;UBERON:0000165,1.96e-07,29;UBERON:0000930,1.96e-07,29;UBERON:0002780,5.22e-07,41;UBERON:0001890,5.22e-07,41;UBERON:0003080,5.22e-07,41;UBERON:0006240,5.22e-07,41;UBERON:0002420,9.05e-07,9;UBERON:0007245,9.05e-07,9;UBERON:0010009,9.05e-07,9;UBERON:0010011,9.05e-07,9;UBERON:0000454,9.05e-07,9;UBERON:0010314,9.87e-07,132 | |||
|phase1_expression=1.81678379270557,1.2846031433459,3.10099689011137,0,1.34088328328186,0,2.53299878168311,0.631719873426831,2.35067065379855,0.245733936501509,0,0.218441372130172,0,2.84662611808107,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.410502947249729,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.401088894940283,1.30206522429511,0,0,1.54545340580512,0,0,0,0.232429036905685,0,0.619412741790207,0,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0,0.209658645508376,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,1.00267582127178,1.59331170856906,0,0,0,0.221729397462564,0,0.327447688744282,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0.993943903390637,0.506522046658319,0.397227542439656,0.286836620748814,1.41867352879343,0,0,0,0.622422070799533,0,0,0,0,0.468642863667593,0.936480230490962,0.570471821544449,0.597794722207204,0.23486899728753,0,0.140450806702248,2.65400422631361,1.22834317311768,2.47981874821837,4.75201142912821,3.70900393917835,0,0.718618141816238,0.841680569770331,2.00189631795143,3.04770527032601,1.75591048352335,0.919463387397059,3.30523729594513,0,0.179389635688862,0.85422955527427,0.211931901159562,0,0.103052529238439,0.257640540045629,0.558350568994769,0.843881661206331,0.194874010322397,0.504867548488229,0.368199594569197,0.161646056818812,0,0,0.508681776931463,0,0.545492241181669,0.573609190778008,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0.977424915930974,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,0,0,1.02882949704857,1.41849132023278,0.266422179016099,0.142977993658148,1.62786481617433,0.823240336780769,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.579125226670317,1.64381058040307,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,5.5211171273613,0.500170521059677,0.542530047399471,0.207970861530807,0,0.788512075169673,0.35142424497814,0.902838299183157,0,0,0.664225598535437,0.553107505625109,1.65078867489357,0,0,0.206768026122887,0,0.426910231213777,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0.280660094433074,1.15325234330131,0,0.804269605718038,0,0.925258162815933,0.177561725313127,1.31403449622095,0,0.232420756919918,0.120859449591622,0,0.0920809889358963,0.803701137152247,2.00300284807389,1.44236856455367,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0.574265537996172,0.650060246036521,1.6068392984416,0.96670718292122,0,0,0.413509717453592,0.644521469209642,0.870100163485371,0.426133137080504,0.0890320356467374,0,0,0.382838137483752,0.6069466851333,0.929691098594572,0.31481234683064,0.6970372701606,0,0.532306030317022,0.869932992075073,0.37064843820784,0,0.372158369359667,0.632758849437452,0.571890581771475,0.511795582622668,0.855877976067841,0.318203247925937,0,0.359744915166629,0.274537029736055,0.824686816419805,0.606547444719948,0,0,0,2.68084838594413,0,0.409499734223957,0.282810863907425,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,1.9676842561399,0.405820753925408,0.6196469961995,0,0,0.589494246078727,0,0.354761064070598,4.22215270595328,1.64647446479951,0.379473173765715,1.39973888097993,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0.166849141711909,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,1.40669416410513,0.667852230137435,0,0,1.9924798825107,0.276283915531148,0,0.20453736500431,0,1.24415835064723,0.269605053441981,0.179021174675609,0,1.1837208676432,0,1.11136990144637,0,0.371072392647405,0,0,0,0.724999575434793,0.341380344856499,0,0,0,0,0,0,1.08536794762867,0,0.331737779793674,0,0.87754158861589,0,0,0.769502585037971,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.530745387020035,0,0,0,0,2.42644078730437,0,0.937057782901357,0,0.19566461893209,0,0.394584402849391,0,0,0.821425535170343,0,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0.261177619741208,1.39781334593624,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0.823040347426423,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,3.01191833562385,0,0,0,0.558564802544508,0,2.15361907373044,0.199679000498991,0,0.223171457441873,0.268733889946905,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,1.22583065500418,0,0,0,0,0,0.728994679896296,0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| |||
|short_description=p21@LPAR1 | |||
}} |
Revision as of 02:45, 23 January 2014
Short description: | p21@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_LPAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -109bp_to_ENST00000441240_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | B1AP63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 7.62e-14 | 5 |
stromal cell | 1.02e-08 | 28 |
fibrocyte | 2.23e-08 | 3 |
tendon cell | 2.23e-08 | 3 |
fibroblast of periodontium | 1.20e-07 | 6 |
fat cell | 1.79e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.10e-09 | 171 |
ectoderm | 2.10e-09 | 171 |
presumptive ectoderm | 2.10e-09 | 171 |
ecto-epithelium | 4.24e-09 | 104 |
neural plate | 1.11e-08 | 82 |
presumptive neural plate | 1.11e-08 | 82 |
gingiva | 1.80e-08 | 8 |
dense regular connective tissue | 2.23e-08 | 3 |
tendon | 2.23e-08 | 3 |
regular connective tissue | 2.23e-08 | 3 |
neural tube | 3.38e-08 | 56 |
neural rod | 3.38e-08 | 56 |
future spinal cord | 3.38e-08 | 56 |
neural keel | 3.38e-08 | 56 |
neurectoderm | 4.79e-08 | 86 |
surface structure | 7.32e-08 | 99 |
regional part of nervous system | 9.67e-08 | 53 |
regional part of brain | 9.67e-08 | 53 |
periodontium | 1.20e-07 | 6 |
dentition | 1.20e-07 | 6 |
subdivision of skeletal system | 1.35e-07 | 16 |
mouth | 1.96e-07 | 29 |
stomodeum | 1.96e-07 | 29 |
regional part of forebrain | 5.22e-07 | 41 |
forebrain | 5.22e-07 | 41 |
anterior neural tube | 5.22e-07 | 41 |
future forebrain | 5.22e-07 | 41 |
basal ganglion | 9.05e-07 | 9 |
nuclear complex of neuraxis | 9.05e-07 | 9 |
aggregate regional part of brain | 9.05e-07 | 9 |
collection of basal ganglia | 9.05e-07 | 9 |
cerebral subcortex | 9.05e-07 | 9 |
structure with developmental contribution from neural crest | 9.87e-07 | 132 |