FFCP PHASE1:Hg19::chr9:113341836..113341899,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15985 | |||
|TSSclassifier=strong | |||
|UniProt=E9PBN8 | |||
|association_with_transcript=-13bp_to_ENST00000302728_5end | |||
|description=CAGE_peak_2_at_SVEP1_5end | |||
|id=chr9:113341836..113341899,- | |||
|ontology_enrichment_celltype=CL:0000055!2.74e-14!180;CL:0000057!1.00e-13!75;CL:0000136!2.78e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.30e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.60e-12,76;CL:0000136,1.24e-09,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!5.06e-16!347;UBERON:0007023!7.33e-16!115;UBERON:0000475!3.60e-15!365;UBERON:0000468!8.90e-14!659;UBERON:0000477!8.48e-12!286;UBERON:0000062!8.38e-11!511;UBERON:0000467!4.31e-10!625;UBERON:0000480!6.34e-10!626;UBERON:0003104!1.80e-08!238;UBERON:0009142!1.80e-08!238;UBERON:0007100!2.08e-08!27;UBERON:0002100!6.52e-08!216;UBERON:0000479!7.30e-08!787;UBERON:0000922!1.27e-07!612;UBERON:0000948!1.68e-07!24;UBERON:0005498!1.68e-07!24;UBERON:0004140!1.68e-07!24;UBERON:0009881!1.68e-07!24;UBERON:0004141!1.68e-07!24;UBERON:0003084!1.68e-07!24;UBERON:0007005!1.68e-07!24;UBERON:0004139!1.68e-07!24;UBERON:0004291!1.68e-07!24;UBERON:0005256!1.83e-07!143;UBERON:0000914!1.91e-07!83;UBERON:0002329!1.91e-07!83;UBERON:0003077!1.91e-07!83;UBERON:0003059!1.91e-07!83;UBERON:0007282!1.91e-07!83;UBERON:0009618!1.91e-07!83;UBERON:0007285!1.91e-07!83;UBERON:0002050!2.02e-07!605;UBERON:0005423!2.02e-07!605;UBERON:0000119!2.14e-07!312;UBERON:0000483!3.20e-07!309;UBERON:0002385!3.31e-07!63;UBERON:0001015!3.31e-07!63;UBERON:0000383!3.31e-07!63;UBERON:0003102!3.53e-07!95;UBERON:0000923!3.86e-07!604;UBERON:0005291!3.86e-07!604;UBERON:0006598!3.86e-07!604;UBERON:0002532!3.86e-07!604;UBERON:0001007!6.25e-07!155;UBERON:0001555!6.25e-07!155;UBERON:0007026!6.25e-07!155;UBERON:0004457!7.25e-07!12;UBERON:0000042!7.25e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.73e-10;25!UBERON:0000948;6.89e-09;22!UBERON:0004457;9.70e-09;9!UBERON:0000042;9.70e-09;9!UBERON:0003688;7.42e-07;6!UBERON:0002358;7.42e-07;6!UBERON:0003684;7.42e-07;6!UBERON:0001178;7.42e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.47e-13,114;UBERON:0007100,3.19e-10,27;UBERON:0001007,9.12e-10,145;UBERON:0001555,9.12e-10,145;UBERON:0007026,9.12e-10,145;UBERON:0000948,4.67e-09,24;UBERON:0005498,4.67e-09,24;UBERON:0004140,4.67e-09,24;UBERON:0009881,4.67e-09,24;UBERON:0004141,4.67e-09,24;UBERON:0003084,4.67e-09,24;UBERON:0007005,4.67e-09,24;UBERON:0004139,4.67e-09,24;UBERON:0004291,4.67e-09,24;UBERON:0004457,1.05e-08,12;UBERON:0000042,1.05e-08,12;UBERON:0004119,4.83e-08,160;UBERON:0000925,4.83e-08,160;UBERON:0006595,4.83e-08,160;UBERON:0004921,4.73e-07,118;UBERON:0011216,6.19e-07,223;UBERON:0003688,7.35e-07,6;UBERON:0002358,7.35e-07,6;UBERON:0003684,7.35e-07,6;UBERON:0001178,7.35e-07,6;UBERON:0000479,8.80e-07,773 | |||
|phase1_expression=8.90224058425727,8.34992043174834,17.6193005119964,15.0109947529696,19.6662881548007,12.2127393374052,2.53299878168311,1.89515962028049,19.5889221149879,0.245733936501509,0.697801167972428,0.218441372130172,0.263766978228454,3.21792517696121,7.95353701746998,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,1.34140171940727,5.11450247374121,2.53007406669196,3.50936537445123,7.24232594804119,0.795285947051099,0,0,0,0,3.07800827419625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.98788780678127,1.8994576749687,9.26864265692532,31.5520282823695,3.19201543978521,1.12135520028461,1.06748995729705,1.2333377420858,7.15785381419462,3.23305612967251,1.47115712802113,2.8757911252537,2.88087962239999,0.468642863667593,0.624320153660641,0.570471821544449,0.448346041655403,0.352303495931295,0.161872944368132,0.280901613404497,2.44985005505872,2.08818339430006,4.02970546585485,1.18800285728205,7.91254173691382,0,2.15585442544872,1.0100166837244,1.50142223846357,3.04770527032601,1.31693286264251,1.22595118319608,9.16452159330241,1.02088964844019,1.97328599257748,5.12537733164562,3.60284231971255,3.90118424909723,2.47326070172253,1.8034837803194,0.930584281657949,1.35021065793013,1.26668106709558,1.51460264546469,7.27194199274165,7.59736467048416,1.42003837006646,0.403008392910561,0.508681776931463,0,0,0,0,0,0.580969714347592,0.10366105501537,0,0,0,0.643240938192885,0,2.78620756819187,0.721879481669586,2.24782920075703,1.51726221070292,1.92808823906786,1.43382164552112,1.08939722046203,1.18635309555548,2.15730093056263,0.98110732562673,1.15424147083917,0,0,4.115740113314,4.41026134156626,0,0,3.54473944008842,0,0,0.171567810298526,0.439001141634502,1.1240175325762,0,0,0.977424915930974,2.07986957055916,1.44331342025273,0,1.29149563659404,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0.581267877027924,0.766765358330422,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0.224262168690721,1.30788020649984,0.2933531432838,1.03417372606222,14.3062578340753,0,3.98907174877306,3.12022310734098,0.771622122786426,0,0.532844358032199,34.7436524589299,11.3950537132203,0.823240336780769,0,22.7450847195229,0,5.12446941001296,4.35766729300147,3.09916272664377,0,0,0,0.239624855491583,0,0,2.17171960001369,0.61642896765115,1.61154866915906,0,0,0,0,0,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,9.69262784581205,1.50051156317903,7.05289061619313,2.28767947683888,3.39015078714607,5.20417969611984,6.55991923959194,2.40756879782175,2.27407504055985,6.2083842775503,0,0.184369168541703,3.0409265063829,0.783204629850962,0.343143423810856,0,0,0,0,0,0,6.94701861892575,8.74733247741956,5.61320188866147,12.429497477803,10.7458522304008,5.30817939773905,16.325987308949,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0,2.29628896329214,2.36718518408732,10.2277043668351,0,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,9.89193711818134,2.1060976908219,1.15513299888823,0,0,1.6068392984416,0.290012154876366,0.770243085573222,1.07452572308291,0.689182862422653,2.68550612170684,3.62541734785571,0.93749290157711,1.15741646340759,0.330569830721956,0.768760269460425,0.382838137483752,0.30347334256665,0,5.98143458978216,0,1.84820148105653,1.06461206063404,0,0.37064843820784,0.858749320451947,0.744316738719335,1.89827654831236,8.00646814480064,0.767693373934002,2.56763392820352,2.86382923133343,0,7.91438813366585,7.68703683260953,7.42218134777825,1.2130948894399,1.58510321173008,0,1.46290121726877,0.243713489631284,2.11300293513511,2.72999822815972,6.78746073377821,1.13008116620243,0,0.66343897524122,0.438450885253763,0,1.9676842561399,0.202910376962704,1.239293992399,0,0.143411352204052,3.53696547647236,0,0.354761064070598,10.3442741295855,19.0991037916743,0.75894634753143,1.74967360122491,0,0,0,12.2386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0.307240764308458,0.447352215784832,0,0,0,0,0.270455678475983,0,0,0,14.2112933893737,0,0,0,0,0,0,0,0.281338832821026,0.333926115068718,0,0,6.97367958878744,8.84108529699673,0,5.4202401726142,0,1.24415835064723,0,0,0,11.7385652707951,0,1.11136990144637,0,0.834912883456661,0,0,0,16.6749902350003,0,0,0.236387681767936,0.689486746482929,0.291604613383254,0.520874984799877,0.885741385813839,0.723578631752448,6.10326945268333,15.1493586105778,6.50204761697804,0.87754158861589,0,0.557694977114413,12.1581408435999,2.73460934032803,0,0,0.108647371922008,0.638002319463839,0.824378340616761,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,6.96683351754953,9.0226715793406,7.332361739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| |||
|short_description=p2@SVEP1 | |||
}} |
Revision as of 02:44, 23 January 2014
Short description: | p2@SVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SVEP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000302728_5end |
EntrezGene: | SVEP1 |
HGNC: | 15985 |
UniProt: | E9PBN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.60e-12 | 76 |
fat cell | 1.24e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.47e-13 | 114 |
primary circulatory organ | 3.19e-10 | 27 |
digestive system | 9.12e-10 | 145 |
digestive tract | 9.12e-10 | 145 |
primitive gut | 9.12e-10 | 145 |
heart | 4.67e-09 | 24 |
primitive heart tube | 4.67e-09 | 24 |
primary heart field | 4.67e-09 | 24 |
anterior lateral plate mesoderm | 4.67e-09 | 24 |
heart tube | 4.67e-09 | 24 |
heart primordium | 4.67e-09 | 24 |
cardiac mesoderm | 4.67e-09 | 24 |
cardiogenic plate | 4.67e-09 | 24 |
heart rudiment | 4.67e-09 | 24 |
cavity lining | 1.05e-08 | 12 |
serous membrane | 1.05e-08 | 12 |
endoderm-derived structure | 4.83e-08 | 160 |
endoderm | 4.83e-08 | 160 |
presumptive endoderm | 4.83e-08 | 160 |
subdivision of digestive tract | 4.73e-07 | 118 |
organ system subdivision | 6.19e-07 | 223 |
omentum | 7.35e-07 | 6 |
peritoneum | 7.35e-07 | 6 |
abdominal cavity | 7.35e-07 | 6 |
visceral peritoneum | 7.35e-07 | 6 |
tissue | 8.80e-07 | 773 |