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FFCP PHASE1:Mm9::chr5:138705170..138705216,-: Difference between revisions

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{{FFCP|EntrezGene=231807|HGNC=|MCL_coexpression_id=247|UniProt=E9Q6X8|association_with_transcript=1bp_to_ENSMUST00000159123,ENSMUST00000171557_5end|description=CAGE_peak_2_at_BC037034_5end|id=chr5:138705170..138705216,-|ontology_enrichment_celltype=CL:0000117!9.66e-09!23;CL:0000337!9.66e-09!23;CL:0000540!2.02e-08!33;CL:0000047!2.02e-08!33;CL:0000031!2.02e-08!33;CL:0000404!2.02e-08!33;CL:0000723!3.39e-07!91;CL:0000048!3.39e-07!91;CL:0002371!5.67e-07!118|ontology_enrichment_celltype_v019_2=CL:0000117,9.66e-09,23;CL:0000337,9.66e-09,23;CL:0000540,2.02e-08,33;CL:0000047,2.02e-08,33;CL:0000031,2.02e-08,33;CL:0000404,2.02e-08,33;CL:0000723,3.38e-07,91;CL:0000048,3.38e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.04e-14!73;UBERON:0005743!7.04e-14!73;UBERON:0000073!1.01e-13!75;UBERON:0001016!1.01e-13!75;UBERON:0007023!6.98e-11!51;UBERON:0002020!2.12e-10!34;UBERON:0001049!3.90e-10!52;UBERON:0005068!3.90e-10!52;UBERON:0006241!3.90e-10!52;UBERON:0007135!3.90e-10!52;UBERON:0000955!1.03e-09!50;UBERON:0006238!1.03e-09!50;UBERON:0002616!2.36e-09!49;UBERON:0002791!2.14e-08!29;UBERON:0003528!2.14e-08!29;UBERON:0001893!2.14e-08!29;UBERON:0004121!2.90e-08!102;UBERON:0000924!2.90e-08!102;UBERON:0006601!2.90e-08!102;UBERON:0000064!1.51e-07!99;UBERON:0003080!3.76e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.04e-14,73;UBERON:0001016,1.01e-13,75;UBERON:0000073,2.70e-11,54;UBERON:0007023,6.98e-11,51;UBERON:0002020,2.12e-10,34;UBERON:0001049,3.90e-10,52;UBERON:0005068,3.90e-10,52;UBERON:0006241,3.90e-10,52;UBERON:0007135,3.90e-10,52;UBERON:0004121,2.28e-09,95;UBERON:0000924,2.28e-09,95;UBERON:0006601,2.28e-09,95;UBERON:0011216,6.27e-09,194;UBERON:0003528,2.14e-08,29;UBERON:0002791,2.14e-08,29;UBERON:0001893,2.14e-08,29;UBERON:0000955,3.61e-08,47;UBERON:0006238,3.61e-08,47;UBERON:0002616,7.90e-08,46;UBERON:0003080,3.76e-07,40;UBERON:0002346,6.65e-07,64;UBERON:0003075,6.65e-07,64;UBERON:0007284,6.65e-07,64|phase1_expression=4.16387002472464,14.3079917132138,20.0199665331396,13.0059610861937,17.5313505481222,9.73699777088961,7.70921713965235,24.2751848070163,16.7538579360483,11.0010327371337,9.75942418885378,11.8062795313098,19.5168832121575,25.1770758966713,5.66286595086627,6.88415909125408,1.39912375625629,17.192688012024,12.4774134581222,14.004858509335,9.95006494767516,5.95745707205312,6.00759515019551,14.0793332058198,14.2233754261645,15.5042630311055,15.0766698655676,10.1271479362368,9.88121781173144,6.5527833737582,10.8647950221099,3.17515336729816,3.07532393792285,0,2.88851619751275,2.82598897109437,3.06254034393554,37.2493151355848,27.346737058333,21.4644735029257,59.4113802911324,49.1792749170081,48.0655249500842,4.65818226509636,3.95370031756107,5.68994931701213,4.69434806608824,2.39827672018491,4.61340983742391,5.8328969722285,4.75953833526233,2.87505128729943,13.0870432725034,20.3101399763176,17.8129713545506,5.14518872071894,5.44413535883638,3.09403255366465,15.1737345644698,20.6306481916093,24.719424736741,5.42151251310611,5.33576877666684,44.5450360054292,54.3876499411836,63.2327302302029,17.6764065205859,18.4424786554346,4.97710139080693,7.1553147315796,6.09942387919008,18.2816630018434,13.0312439161452,9.0643191419066,4.98396449294829,11.0306254393203,28.6301290598411,28.7296510691672,25.4986845205364,19.1235117208781,18.1145534332771,13.5437476344758,27.6391169011367,24.7615548413939,25.0589126353969,14.4368006882097,16.9422300150933,19.0127434741807,4.69502398665741,8.08615693142605,5.2175607966302,3.44169550792555,8.15965600449301,10.7940638327563,7.79731700937203,7.6164570806547,7.72444310724635,4.26075806445144,5.45550609666024,1.41335829804136,4.50698943285378,6.41632387071589,0,7.11066703153331,3.030874574157,5.82727690592727,5.05524445014783,6.39429726426736,6.99132285847364,6.53145411885229,5.03107447621794,3.95805121805784,2.7673859670727,5.42601505989441,6.46737889246376,3.89566433121994,7.66304399976559,6.07317299063629,12.3845477272982,5.3383060482645,7.72945314611377,5.33362778448744,9.31958806090611,19.3235326027621,13.823482649688,13.2837668708468,2.87556298814209,2.99951365496704,1.77898317902291,25.9137806170343,21.0450277296568,16.5863744788981,17.0347833788431,19.6900902144355,22.8566849015516,19.4689515681309,3.7680564624617,9.45492976636707,10.867078612648,4.62972082950243,3.25301107406759,1.83921683546778,3.24111833649629,3.16480117455002,4.42237244483631,4.09963904911519,4.40398105430725,6.98499100995342,1.72454394346274,4.9167580843633,3.34307135911503,2.6303487891309,4.17070873838397,3.83077383174383,3.70407845534298,4.37875387000685,2.1066395619397,3.3455227924913,4.83077948972507,1.65700618028402,3.28336483973535,1.44049649168812,2.13070262026689,2.75469924446365,2.00547246753592,2.32533944750408,1.87791380979733,1.75148013550754,1.6455984991348,1.64167464079095,1.94565142910054,1.31579988682799,2.63460138349261,1.8788898626452,17.4540657308226,13.0688857721691,11.2342386214491,9.52022039988759,2.559459006422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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:231807
|HGNC=
|MCL_coexpression_id=247
|TSSclassifier=NA
|UniProt=uniprot:E9Q6X8
|association_with_transcript=1bp_to_ENSMUST00000159123,ENSMUST00000171557_5end
|cluster_id=chr5:138705170..138705216,-
|description=CAGE_peak_2_at_BC037034_5end
|id=chr5:138705170..138705216,-
|ontology_enrichment_celltype=CL:0000117!9.66e-09!23;CL:0000337!9.66e-09!23;CL:0000540!2.02e-08!33;CL:0000047!2.02e-08!33;CL:0000031!2.02e-08!33;CL:0000404!2.02e-08!33;CL:0000723!3.39e-07!91;CL:0000048!3.39e-07!91;CL:0002371!5.67e-07!118
|ontology_enrichment_celltype_v019_2=CL:0000117,9.66e-09,23;CL:0000337,9.66e-09,23;CL:0000540,2.02e-08,33;CL:0000047,2.02e-08,33;CL:0000031,2.02e-08,33;CL:0000404,2.02e-08,33;CL:0000723,3.38e-07,91;CL:0000048,3.38e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.04e-14!73;UBERON:0005743!7.04e-14!73;UBERON:0000073!1.01e-13!75;UBERON:0001016!1.01e-13!75;UBERON:0007023!6.98e-11!51;UBERON:0002020!2.12e-10!34;UBERON:0001049!3.90e-10!52;UBERON:0005068!3.90e-10!52;UBERON:0006241!3.90e-10!52;UBERON:0007135!3.90e-10!52;UBERON:0000955!1.03e-09!50;UBERON:0006238!1.03e-09!50;UBERON:0002616!2.36e-09!49;UBERON:0002791!2.14e-08!29;UBERON:0003528!2.14e-08!29;UBERON:0001893!2.14e-08!29;UBERON:0004121!2.90e-08!102;UBERON:0000924!2.90e-08!102;UBERON:0006601!2.90e-08!102;UBERON:0000064!1.51e-07!99;UBERON:0003080!3.76e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.04e-14,73;UBERON:0001016,1.01e-13,75;UBERON:0000073,2.70e-11,54;UBERON:0007023,6.98e-11,51;UBERON:0002020,2.12e-10,34;UBERON:0001049,3.90e-10,52;UBERON:0005068,3.90e-10,52;UBERON:0006241,3.90e-10,52;UBERON:0007135,3.90e-10,52;UBERON:0004121,2.28e-09,95;UBERON:0000924,2.28e-09,95;UBERON:0006601,2.28e-09,95;UBERON:0011216,6.27e-09,194;UBERON:0003528,2.14e-08,29;UBERON:0002791,2.14e-08,29;UBERON:0001893,2.14e-08,29;UBERON:0000955,3.61e-08,47;UBERON:0006238,3.61e-08,47;UBERON:0002616,7.90e-08,46;UBERON:0003080,3.76e-07,40;UBERON:0002346,6.65e-07,64;UBERON:0003075,6.65e-07,64;UBERON:0007284,6.65e-07,64
|phase1_expression=4.16387002472464,14.3079917132138,20.0199665331396,13.0059610861937,17.5313505481222,9.73699777088961,7.70921713965235,24.2751848070163,16.7538579360483,11.0010327371337,9.75942418885378,11.8062795313098,19.5168832121575,25.1770758966713,5.66286595086627,6.88415909125408,1.39912375625629,17.192688012024,12.4774134581222,14.004858509335,9.95006494767516,5.95745707205312,6.00759515019551,14.0793332058198,14.2233754261645,15.5042630311055,15.0766698655676,10.1271479362368,9.88121781173144,6.5527833737582,10.8647950221099,3.17515336729816,3.07532393792285,0,2.88851619751275,2.82598897109437,3.06254034393554,37.2493151355848,27.346737058333,21.4644735029257,59.4113802911324,49.1792749170081,48.0655249500842,4.65818226509636,3.95370031756107,5.68994931701213,4.69434806608824,2.39827672018491,4.61340983742391,5.8328969722285,4.75953833526233,2.87505128729943,13.0870432725034,20.3101399763176,17.8129713545506,5.14518872071894,5.44413535883638,3.09403255366465,15.1737345644698,20.6306481916093,24.719424736741,5.42151251310611,5.33576877666684,44.5450360054292,54.3876499411836,63.2327302302029,17.6764065205859,18.4424786554346,4.97710139080693,7.1553147315796,6.09942387919008,18.2816630018434,13.0312439161452,9.0643191419066,4.98396449294829,11.0306254393203,28.6301290598411,28.7296510691672,25.4986845205364,19.1235117208781,18.1145534332771,13.5437476344758,27.6391169011367,24.7615548413939,25.0589126353969,14.4368006882097,16.9422300150933,19.0127434741807,4.69502398665741,8.08615693142605,5.2175607966302,3.44169550792555,8.15965600449301,10.7940638327563,7.79731700937203,7.6164570806547,7.72444310724635,4.26075806445144,5.45550609666024,1.41335829804136,4.50698943285378,6.41632387071589,0,7.11066703153331,3.030874574157,5.82727690592727,5.05524445014783,6.39429726426736,6.99132285847364,6.53145411885229,5.03107447621794,3.95805121805784,2.7673859670727,5.42601505989441,6.46737889246376,3.89566433121994,7.66304399976559,6.07317299063629,12.3845477272982,5.3383060482645,7.72945314611377,5.33362778448744,9.31958806090611,19.3235326027621,13.823482649688,13.2837668708468,2.87556298814209,2.99951365496704,1.77898317902291,25.9137806170343,21.0450277296568,16.5863744788981,17.0347833788431,19.6900902144355,22.8566849015516,19.4689515681309,3.7680564624617,9.45492976636707,10.867078612648,4.62972082950243,3.25301107406759,1.83921683546778,3.24111833649629,3.16480117455002,4.42237244483631,4.09963904911519,4.40398105430725,6.98499100995342,1.72454394346274,4.9167580843633,3.34307135911503,2.6303487891309,4.17070873838397,3.83077383174383,3.70407845534298,4.37875387000685,2.1066395619397,3.3455227924913,4.83077948972507,1.65700618028402,3.28336483973535,1.44049649168812,2.13070262026689,2.75469924446365,2.00547246753592,2.32533944750408,1.87791380979733,1.75148013550754,1.6455984991348,1.64167464079095,1.94565142910054,1.31579988682799,2.63460138349261,1.8788898626452,17.4540657308226,13.0688857721691,11.2342386214491,9.52022039988759,2.55945900642281,2.32236671860439,2.96395161040815,3.63030344322017,4.89231696458715,6.65789691393957,14.2358718463353,7.08205505313247,8.04272668160862,7.16243299348143,7.21367122340745,11.6846523125049,10.8069024937347,13.7407478545513,3.03468641524931,2.74196430263349,2.25415471346161,5.29493452397817,2.52138233317913,3.36651935473529,4.36332106157375,5.46157547524528,4.86696056308262,4.81248939295022,12.4510103376603,3.00321190288969,2.35870794135844,3.37293168577281,3.04290182082754,4.3411888755435,3.05551022137704,5.75392274901621,6.48540907100142,2.74561413188081,0,3.34926852901653,7.48890415474945,8.5876818502018,3.94674309748207,5.30687873499704,9.05290631816363,3.22135400009824,2.93336957595647,3.05541154395339,3.52035372432753,3.51763140627813,2.85652369063216,5.26860849216057,3.62560831444239,4.65075848262427,7.97273843287435,7.04612253277673,5.87128938344045,6.50920763616802,22.6186925908908,22.3001330365671,7.37646409528554,8.27810238914197,20.871576698413,21.0981035865966,0.491804836130026,3.53459298086122,6.62567260774139,4.68526493155966,9.90947629570875,6.4521575447189,10.0259403337077,9.90767857760913,7.2865926301481,10.5212108848072,8.69633111482352,15.1021018718249,5.96148357874728,4.27357448801413,6.02681749608232,7.58862565673663,11.9470624505967,1.69946445308487,2.41858845571801,3.01768127609437,4.13422650033082,2.76691633149535,8.78656196771952,5.81653967164009,5.34746067577082,10.1131762539461,9.48767477174989,9.28219889233682,13.2771446243977,3.6012218806262,4.78627129996192,2.35770738534752,3.54680467284547,3.21063871683727,6.58196082408484,5.48036908406279,10.560226862867,4.66030555900404,6.17479514553893,6.26567761177624,3.55221738730992,3.61877549568935,3.81991500810037,3.77524069413641,6.41257840585672,19.8405073151245,11.9609616558497,6.60437977482312,6.85219751267933,5.46268525313604,6.56132293060921,7.77845788902177,1.35982743995084,2.79902904647316,4.28419918793714,11.4560474161814,3.00519193902079,3.04979200690273,2.80813886136683,4.59994251231831,4.36725127492355,6.60835297285622,5.78574190077352,5.75863072364865,8.42497326396654,8.07741107013003,13.5286305284206,2.54178128274764,1.98550188548517,3.88902376688095,2.0665571756437,3.8859908862879,4.45957506853865,5.07797100891405,5.13810787685983,14.4950472495604,13.5374102941197,7.58426689507628,4.05450430580328,2.36235201479103,2.85825810551149,5.72885426135941,2.58285761215644,5.52899067791857,5.02144392393563,4.74542314756294,3.58171991278499,4.2346997757473,8.28391986287895,5.00301576529713,6.778860326531,8.38902419376282,5.77163478772568,6.01082839283487,4.02923079273788,7.14801497919105,10.5102186252662,6.22715522508701,15.6488916727718,14.0440189129902,15.2482997506608,15.1907328047368,9.73922372846974,16.6697586873377,12.3314853558716,13.5970901530146,16.2005400055633,15.3109209096235,14.0474146785103,16.5683299760582,2.38710899443606,3.19219898720825,5.80494259564056,2.43106717068294,5.24032906569956,4.04455718590031,6.66740183404846,4.53277125925567,5.13470735346904,4.54854981174835,4.81610669791456,4.52703219326583,5.24392441831341,3.64943368707755,6.14559517825062,3.33405583898152,6.14186927507734,5.98018583437486,4.53294490883637,5.00476328456951,3.77156177623957,5.50174999093946,4.29185141905178,4.0696996657052,4.70546902076653,5.16149108139227,4.39027134894654,4.73525480588117,4.20992752922171,5.61142271657738,6.28765596058123,4.72821515402705,4.50154147486658,4.18329471202108,3.47231899766054,8.49355964989016,5.38042699424439,6.44613162144895,2.86932498103265,3.97064554415128,3.70988536992674
|short_description=p2@BC037034
}}

Revision as of 22:25, 3 August 2015

Short description:p2@BC037034
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_BC037034_5end
Coexpression cluster:MCL_coexpression_mm9:247
Association with transcript: 1bp_to_ENSMUST00000159123, ENSMUST00000171557_5end
EntrezGene:231807
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@BC037034

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I514.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.02
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E924.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.76
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.81
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.52
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.88
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.22
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I115.08
GP2+ M cell, pool3.CNhs13240.11847-124I210.13
Ileum epithelium, pool1.CNhs13199.10252-104B99.88
Ileum epithelium, pool2.CNhs13232.10253-104C16.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G837.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H127.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H321.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G959.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H249.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H448.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.09
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I920.31
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.81
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C315.17
Mouse Granule cells, donor2.CNhs12357.11731-123E320.63
Mouse Granule cells, donor3.CNhs12108.11636-122C724.72
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C744.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E754.39
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D263.23
Mouse Microglia, donor1.CNhs12629.11718-123C817.68
Mouse Microglia, donor2.CNhs12634.11736-123E818.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.64
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.01
Mouse Schwann, donor1.CNhs12507.11728-123D94.70
Mouse Schwann, donor2.CNhs12573.11746-123F98.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.39
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D76.53
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C16.47
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A87.66
aorta, adult.CNhs10498.46-23H16.07
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A67.73
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I213.82
colon, adult.CNhs10468.36-18H713.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A425.91
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F116.59
cortex, adult.CNhs10473.12-14D517.03
cortex, neonate N30.CNhs11107.1392-42F219.69
diencephalon, adult.CNhs10482.20-12F222.86
diencephalon, neonate N30.CNhs11201.1388-42B219.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.45
epididymis, adult.CNhs10490.58-23B210.87
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C64.42
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G84.40
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H24.92
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E817.45
hippocampus, neonate N00.CNhs11228.627-43G113.07
intestinal mucosa, adult.CNhs10506.860-29I311.23
intestine, adult.CNhs10496.178-9A39.52
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D114.24
intestine, neonate N01.CNhs11192.1322-23E97.08
intestine, neonate N06.CNhs11102.688-20B88.04
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A57.21
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E310.81
intestine, neonate N30.CNhs11131.1384-42G113.74
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D54.36
kidney, neonate N20.CNhs11113.832-19I15.46
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B212.45
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F46.49
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B19.05
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A122.30
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H28.28
medulla oblongata, adult.CNhs10477.17-12C220.87
medulla oblongata, neonate N30.CNhs11200.1396-42A321.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I915.10
ovary, adult.CNhs10507.91-2I75.96
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G67.59
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G813.28
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H33.62
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C919.84
spleen, adult.CNhs10465.25-2G211.96
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D15.46
spleen, neonate N20.CNhs11112.824-19H16.56
spleen, neonate N25.CNhs11099.1354-25G37.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B86.61
stomach, neonate N07.CNhs11210.718-18A95.79
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I18.42
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B74.46
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D95.14
testis, neonate N20.CNhs11110.839-18H314.50
testis, neonate N30.CNhs11130.1391-42E213.54
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C52.86
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F85.53
thymus, neonate N03.CNhs11137.2104-43C75.02
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D33.58
thymus, neonate N10.CNhs11194.748-24E44.23
thymus, neonate N20.CNhs11186.820-7A28.28
thymus, neonate N25.CNhs11125.1362-25G75.00
thymus, neonate N30.CNhs11132.1393-42G26.78
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.01
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E47.15
uterus, adult pregnant day19.CNhs10497.590-15F510.51
uterus, adult.CNhs10509.92-27E56.23
vagina, adult.CNhs10502.89-27D515.65
vesicular gland, adult.CNhs10491.51-27F814.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.66e-0923
neuroblast (sensu Vertebrata)9.66e-0923
neuron2.02e-0833
neuronal stem cell2.02e-0833
neuroblast2.02e-0833
electrically signaling cell2.02e-0833
somatic stem cell3.38e-0791
multi fate stem cell3.38e-0791

Uber anatomy
Ontology termp-valuen
central nervous system7.04e-1473
nervous system1.01e-1375
regional part of nervous system2.70e-1154
adult organism6.98e-1151
gray matter2.12e-1034
neural tube3.90e-1052
neural rod3.90e-1052
future spinal cord3.90e-1052
neural keel3.90e-1052
ectoderm-derived structure2.28e-0995
ectoderm2.28e-0995
presumptive ectoderm2.28e-0995
organ system subdivision6.27e-09194
brain grey matter2.14e-0829
regional part of telencephalon2.14e-0829
telencephalon2.14e-0829
brain3.61e-0847
future brain3.61e-0847
regional part of brain7.90e-0846
anterior neural tube3.76e-0740
neurectoderm6.65e-0764
neural plate6.65e-0764
presumptive neural plate6.65e-0764
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