FFCP PHASE1:Mm9::chr5:123794591..123794638,+: Difference between revisions
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{{FFCP|EntrezGene=77045|HGNC=|MCL_coexpression_id=3253|UniProt=Q9CXE2|association_with_transcript=82bp_to_ENSMUST00000117971_5end|description=CAGE_peak_2_at_Bcl7a_5end|id=chr5:123794591..123794638,+|ontology_enrichment_celltype=CL:0000540!3.55e-15!33;CL:0000047!3.55e-15!33;CL:0000031!3.55e-15!33;CL:0000404!3.55e-15!33;CL:0000117!1.28e-11!23;CL:0000337!1.28e-11!23;CL:0000393!2.36e-10!39;CL:0000211!2.36e-10!39;CL:0000221!2.01e-09!44;CL:0000133!2.01e-09!44;CL:0002319!3.04e-09!43|ontology_enrichment_celltype_v019_2=CL:0000540,2.52e-15,33;CL:0000047,2.52e-15,33;CL:0000031,2.52e-15,33;CL:0000404,2.52e-15,33;CL:0000117,9.93e-12,23;CL:0000337,9.93e-12,23;CL:0000393,1.30e-10,39;CL:0000211,1.30e-10,39;CL:0000221,1.45e-09,44;CL:0000133,1.45e-09,44;CL:0002319,2.21e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.83e-19!73;UBERON:0005743!3.83e-19!73;UBERON:0000073!8.39e-19!75;UBERON:0001016!8.39e-19!75;UBERON:0004121!1.16e-17!102;UBERON:0000924!1.16e-17!102;UBERON:0006601!1.16e-17!102;UBERON:0000153!1.05e-16!94;UBERON:0002346!5.84e-16!71;UBERON:0003075!5.84e-16!71;UBERON:0007284!5.84e-16!71;UBERON:0000033!6.50e-16!63;UBERON:0007811!1.63e-15!86;UBERON:0003056!2.79e-15!49;UBERON:0002020!4.51e-14!34;UBERON:0001049!5.10e-14!52;UBERON:0005068!5.10e-14!52;UBERON:0006241!5.10e-14!52;UBERON:0007135!5.10e-14!52;UBERON:0000955!7.45e-13!50;UBERON:0006238!7.45e-13!50;UBERON:0002616!2.55e-12!49;UBERON:0003080!6.86e-12!40;UBERON:0002791!9.70e-12!29;UBERON:0003528!9.70e-12!29;UBERON:0001893!9.70e-12!29;UBERON:0002780!1.33e-11!39;UBERON:0001890!1.33e-11!39;UBERON:0006240!1.33e-11!39;UBERON:0000956!2.71e-09!21;UBERON:0001869!2.71e-09!21;UBERON:0000203!2.71e-09!21;UBERON:0000475!3.33e-07!200;UBERON:0002619!8.15e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.86e-20,95;UBERON:0000924,5.86e-20,95;UBERON:0006601,5.86e-20,95;UBERON:0001017,2.11e-19,73;UBERON:0001016,4.68e-19,75;UBERON:0002346,5.45e-19,64;UBERON:0003075,5.45e-19,64;UBERON:0007284,5.45e-19,64;UBERON:0010371,1.19e-17,73;UBERON:0003056,1.85e-15,49;UBERON:0000073,6.36e-15,54;UBERON:0001049,2.52e-14,52;UBERON:0005068,2.52e-14,52;UBERON:0006241,2.52e-14,52;UBERON:0007135,2.52e-14,52;UBERON:0002020,3.06e-14,34;UBERON:0000955,2.28e-12,47;UBERON:0006238,2.28e-12,47;UBERON:0003080,4.97e-12,40;UBERON:0003528,6.99e-12,29;UBERON:0002791,6.99e-12,29;UBERON:0001893,6.99e-12,29;UBERON:0002616,7.83e-12,46;UBERON:0002780,9.70e-12,39;UBERON:0001890,9.70e-12,39;UBERON:0006240,9.70e-12,39;UBERON:0010314,9.82e-12,92;UBERON:0000956,2.07e-09,21;UBERON:0001869,2.07e-09,21;UBERON:0000203,2.07e-09,21;UBERON:0002619,6.67e-07,17|phase1_expression=6.40595388419176,0.348975407639361,0.454999239389536,0,0,0.671517087647559,1.16806320297763,1.16210991097419,0.563154888606667,1.17032263160997,0.856089841127525,0.239316476986009,1.54080656938085,1.83582845079895,0.999329285446988,1.01237633694913,0,4.57420139769445,3.83920414096069,3.39511721438424,4.42225108785563,4.56738375524072,3.6567970479451,2.87986361028132,0.91763712426868,0.57423196411502,0.86152399231815,0,0.190023419456374,0.252030129759931,0.443461021310609,5.08024538767705,1.84519436275371,0,0.577703239502549,0.664938581433969,1.22501613757421,0.418531630736908,0,0,0.588231488031014,0,0,1.88845226963366,1.52065396829272,1.65192076945513,0,1.96222640742402,1.09843091367236,0.388859798148567,0.699932108126813,1.43752564364972,3.02008690903925,1.45072428402269,1.00828139742739,0.514518872071894,0.286533439938757,0,16.7922662513466,12.1667925232568,16.4796164911607,0.677689064138264,0,0.899899717281399,0,0,2.99600110518405,1.15265491596466,26.6482303632788,23.0860154547191,27.3422449756797,7.9982275633065,9.05561017901615,17.0262210908786,20.5109307979026,14.7075005857603,4.40463523997555,8.55505165170758,6.75868746327471,12.7929699098288,15.2784364816024,16.1483144872596,3.62937898701795,5.6276261003168,4.5839474333043,9.1334861496837,9.8236459751381,14.3527573285481,2.19605960666234,3.40072020480535,3.47837386442013,1.72084775396277,0,2.15881276655127,0,0.448026887097336,1.68533304158102,0.170430322578058,0.259786004602869,0.35333957451034,5.49289337129054,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,2.02209778005913,2.2836775943812,3.88406825470758,0.890652834388949,3.12273588179045,1.82679286987285,2.53677046981664,1.65794904607885,2.93971767839262,0.879666139307728,0.494389935468748,0.86759614151947,2.65383165584962,5.50007289821191,6.62524555381181,4.84875253135222,0,7.02673912827713,9.21565509979202,0.510914110417183,2.99537811264801,0.599902730993408,2.66847476853436,6.89036941262184,4.57500602818627,14.827213549318,13.3844726548053,14.5757810678288,7.2725815595846,12.0058534670141,3.66621709861139,6.46916247172484,2.27450482590307,2.10441855886474,10.2795149940536,8.96618207290544,11.5239763075424,8.74087943447147,12.3826428455417,14.476850392188,14.4300655821982,5.69147415625834,14.6586235194333,10.2117283290622,7.03804496655795,4.38391464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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77045 | |||
|HGNC= | |||
|MCL_coexpression_id=3253 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CXE2 | |||
|association_with_transcript=82bp_to_ENSMUST00000117971_5end | |||
|cluster_id=chr5:123794591..123794638,+ | |||
|description=CAGE_peak_2_at_Bcl7a_5end | |||
|id=chr5:123794591..123794638,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.55e-15!33;CL:0000047!3.55e-15!33;CL:0000031!3.55e-15!33;CL:0000404!3.55e-15!33;CL:0000117!1.28e-11!23;CL:0000337!1.28e-11!23;CL:0000393!2.36e-10!39;CL:0000211!2.36e-10!39;CL:0000221!2.01e-09!44;CL:0000133!2.01e-09!44;CL:0002319!3.04e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.52e-15,33;CL:0000047,2.52e-15,33;CL:0000031,2.52e-15,33;CL:0000404,2.52e-15,33;CL:0000117,9.93e-12,23;CL:0000337,9.93e-12,23;CL:0000393,1.30e-10,39;CL:0000211,1.30e-10,39;CL:0000221,1.45e-09,44;CL:0000133,1.45e-09,44;CL:0002319,2.21e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.83e-19!73;UBERON:0005743!3.83e-19!73;UBERON:0000073!8.39e-19!75;UBERON:0001016!8.39e-19!75;UBERON:0004121!1.16e-17!102;UBERON:0000924!1.16e-17!102;UBERON:0006601!1.16e-17!102;UBERON:0000153!1.05e-16!94;UBERON:0002346!5.84e-16!71;UBERON:0003075!5.84e-16!71;UBERON:0007284!5.84e-16!71;UBERON:0000033!6.50e-16!63;UBERON:0007811!1.63e-15!86;UBERON:0003056!2.79e-15!49;UBERON:0002020!4.51e-14!34;UBERON:0001049!5.10e-14!52;UBERON:0005068!5.10e-14!52;UBERON:0006241!5.10e-14!52;UBERON:0007135!5.10e-14!52;UBERON:0000955!7.45e-13!50;UBERON:0006238!7.45e-13!50;UBERON:0002616!2.55e-12!49;UBERON:0003080!6.86e-12!40;UBERON:0002791!9.70e-12!29;UBERON:0003528!9.70e-12!29;UBERON:0001893!9.70e-12!29;UBERON:0002780!1.33e-11!39;UBERON:0001890!1.33e-11!39;UBERON:0006240!1.33e-11!39;UBERON:0000956!2.71e-09!21;UBERON:0001869!2.71e-09!21;UBERON:0000203!2.71e-09!21;UBERON:0000475!3.33e-07!200;UBERON:0002619!8.15e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.86e-20,95;UBERON:0000924,5.86e-20,95;UBERON:0006601,5.86e-20,95;UBERON:0001017,2.11e-19,73;UBERON:0001016,4.68e-19,75;UBERON:0002346,5.45e-19,64;UBERON:0003075,5.45e-19,64;UBERON:0007284,5.45e-19,64;UBERON:0010371,1.19e-17,73;UBERON:0003056,1.85e-15,49;UBERON:0000073,6.36e-15,54;UBERON:0001049,2.52e-14,52;UBERON:0005068,2.52e-14,52;UBERON:0006241,2.52e-14,52;UBERON:0007135,2.52e-14,52;UBERON:0002020,3.06e-14,34;UBERON:0000955,2.28e-12,47;UBERON:0006238,2.28e-12,47;UBERON:0003080,4.97e-12,40;UBERON:0003528,6.99e-12,29;UBERON:0002791,6.99e-12,29;UBERON:0001893,6.99e-12,29;UBERON:0002616,7.83e-12,46;UBERON:0002780,9.70e-12,39;UBERON:0001890,9.70e-12,39;UBERON:0006240,9.70e-12,39;UBERON:0010314,9.82e-12,92;UBERON:0000956,2.07e-09,21;UBERON:0001869,2.07e-09,21;UBERON:0000203,2.07e-09,21;UBERON:0002619,6.67e-07,17 | |||
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| |||
|short_description=p2@Bcl7a | |||
}} |
Revision as of 06:44, 6 August 2015
Short description: | p2@Bcl7a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Bcl7a_5end |
Coexpression cluster: | MCL_coexpression_mm9:3253 |
Association with transcript: | 82bp_to_ENSMUST00000117971_5end |
EntrezGene: | 77045 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.52e-15 | 33 |
neuronal stem cell | 2.52e-15 | 33 |
neuroblast | 2.52e-15 | 33 |
electrically signaling cell | 2.52e-15 | 33 |
CNS neuron (sensu Vertebrata) | 9.93e-12 | 23 |
neuroblast (sensu Vertebrata) | 9.93e-12 | 23 |
electrically responsive cell | 1.30e-10 | 39 |
electrically active cell | 1.30e-10 | 39 |
ectodermal cell | 1.45e-09 | 44 |
neurectodermal cell | 1.45e-09 | 44 |
neural cell | 2.21e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.86e-20 | 95 |
ectoderm | 5.86e-20 | 95 |
presumptive ectoderm | 5.86e-20 | 95 |
central nervous system | 2.11e-19 | 73 |
nervous system | 4.68e-19 | 75 |
neurectoderm | 5.45e-19 | 64 |
neural plate | 5.45e-19 | 64 |
presumptive neural plate | 5.45e-19 | 64 |
ecto-epithelium | 1.19e-17 | 73 |
pre-chordal neural plate | 1.85e-15 | 49 |
regional part of nervous system | 6.36e-15 | 54 |
neural tube | 2.52e-14 | 52 |
neural rod | 2.52e-14 | 52 |
future spinal cord | 2.52e-14 | 52 |
neural keel | 2.52e-14 | 52 |
gray matter | 3.06e-14 | 34 |
brain | 2.28e-12 | 47 |
future brain | 2.28e-12 | 47 |
anterior neural tube | 4.97e-12 | 40 |
brain grey matter | 6.99e-12 | 29 |
regional part of telencephalon | 6.99e-12 | 29 |
telencephalon | 6.99e-12 | 29 |
regional part of brain | 7.83e-12 | 46 |
regional part of forebrain | 9.70e-12 | 39 |
forebrain | 9.70e-12 | 39 |
future forebrain | 9.70e-12 | 39 |
structure with developmental contribution from neural crest | 9.82e-12 | 92 |
cerebral cortex | 2.07e-09 | 21 |
cerebral hemisphere | 2.07e-09 | 21 |
pallium | 2.07e-09 | 21 |
regional part of cerebral cortex | 6.67e-07 | 17 |