FFCP PHASE1:Mm9::chr5:113709567..113709589,-: Difference between revisions
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{{FFCP|EntrezGene=52850|HGNC=|MCL_coexpression_id=106|UniProt=D3Z7V5|association_with_transcript=17bp_to_ENSMUST00000112324_5end|description=CAGE_peak_4_at_Sgsm1_5end|id=chr5:113709567..113709589,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.58e-09,23;UBERON:0009856,2.58e-09,23;UBERON:0002107,3.76e-08,22;UBERON:0007499,3.76e-08,22;UBERON:0006925,3.76e-08,22;UBERON:0009497,3.76e-08,22;UBERON:0000015,3.76e-08,22;UBERON:0002423,3.76e-08,22;UBERON:0006235,3.76e-08,22;UBERON:0008835,3.76e-08,22;UBERON:0003894,3.76e-08,22;UBERON:0004161,3.76e-08,22;UBERON:0008836,3.76e-08,22;UBERON:0002365,5.01e-08,25;UBERON:0002330,5.01e-08,25;UBERON:0005256,5.20e-08,45;UBERON:0003104,9.77e-07,61;UBERON:0009142,9.77e-07,61|phase1_expression=0.480446541314382,0.697950815278722,0,0.30246421130683,1.00179145989269,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0.47997726838022,0.68822784320151,0.57423196411502,0,0.430942465371778,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,0.577703239502549,1.32987716286794,1.42918549383658,0,0,0,0,0,0,1.1330713617802,1.4192770370732,1.83546752161682,0.782391344348039,3.2703773457067,1.75748946187577,0.194429899074283,1.81982348112971,4.31257693094915,0,0,0,0.771778308107841,0,0,0,0,0,0.338844532069132,0,0,0,0,0.898800331555214,0.384218305321555,0.207379224616955,0.405017814995072,0,0.571301968807607,0.220868540951614,0.367472397644862,0.670918297127655,0,0,0,0.153606533256243,0.131886287730194,0.365950574409639,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,3.3319525066601,1.81371744256285,0,0,0,1.61910957491345,2.59910566979068,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,1.08245520505607,0.506719730950197,0,0.11418387971906,0,0,0.867426633830679,0.304465478312141,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0,0,3.72783522436244,0,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0,0,0,0,0.486723789203273,0.203678727700633,0.497627882440372,1.76905930903572,1.89397670297827,0.910843100738926,0.689706313300419,0.180062129805349,0.753524089178575,0.680364991513279,0.768682321709099,0.187403449119458,0.517406741478031,3.01795190105979,0.378212160335639,0.175951124163949,0.43839146485515,0.556094498451196,0,0,0.398068533636986,0,0,0,1.03562886267751,0.469052119962192,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,0,0.205809224758569,0,1.05780226665418,0.853153002140936,1.16118335930219,1.15980715189884,2.01683524623343,2.00140239460383,1.33157938278791,0.474529061544512,0.494096864172033,0,0,0.58489226135736,1.79763881730844,0.648414149624083,0.398282546508734,1.13800740571849,0.571242563048644,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0,0.156998727841375,0.123397163921801,2.37162101669719,0.83422552858047,0.786235980452812,1.12431056192427,1.01430060694251,1.4470629585145,1.52775511068852,2.01387296215567,0.324270453550071,0.823684239564244,1.43768206527355,0,2.18426371180192,4.2938409251009,4.66433275156972,0.482443521363367,0.184753190166605,0.189491411770485,0,1.01847051465113,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.478364305972461,0,0.518054945597687,0.144649058581512,0,0,0,0,0.80275294993896,0.35163505977661,0,0,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0,0.404810701674894,0.584511715822624,0,0,0.425820255624806,0.178065603667255,0,0.329940245945071,0,0.485561272309963,0.302323556964751,1.88605079755898,2.06711325016541,1.53717573971964,0.516856586336442,0,0.356497378384721,0.632073515871632,2.10837217149998,0,0.340439605753788,0.540183282093931,0.776152102696527,0.428674070063185,0.532020700926821,0.178368817602071,0.164549020602121,0,3.05073220482823,0.63549621259146,1.32317038832977,0,0.161464426695906,0,0,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0.474503990371703,0.406638934253697,0.86404272657441,1.25452977608681,1.31017538247707,0.404593039154462,0.743881101528023,0.26175594198403,1.42576470620972,1.24267862617385,0,0.598066184175915,0.330916980914195,0.583353565032143,0.258319646955462,0.337912250981556,0,0,0.314578033277133,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.443971906748129,0.986852422704233,0.671538465456314,0.386379188064381,16.8914227906064,9.52388446189778,1.2862102744744,2.00628841614145,0,0,0,0,0,0,0,0,0,0,1.764384908931,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.551530525350042,0.666740183404846,0.412070114477788,1.60459604795908,0.758091635291392,0.760437899670719,0.377252682772152,0.37456602987953,0.320125762024346,0.344612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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:52850 | |||
|HGNC= | |||
|MCL_coexpression_id=106 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z7V5 | |||
|association_with_transcript=17bp_to_ENSMUST00000112324_5end | |||
|cluster_id=chr5:113709567..113709589,- | |||
|description=CAGE_peak_4_at_Sgsm1_5end | |||
|id=chr5:113709567..113709589,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.58e-09,23;UBERON:0009856,2.58e-09,23;UBERON:0002107,3.76e-08,22;UBERON:0007499,3.76e-08,22;UBERON:0006925,3.76e-08,22;UBERON:0009497,3.76e-08,22;UBERON:0000015,3.76e-08,22;UBERON:0002423,3.76e-08,22;UBERON:0006235,3.76e-08,22;UBERON:0008835,3.76e-08,22;UBERON:0003894,3.76e-08,22;UBERON:0004161,3.76e-08,22;UBERON:0008836,3.76e-08,22;UBERON:0002365,5.01e-08,25;UBERON:0002330,5.01e-08,25;UBERON:0005256,5.20e-08,45;UBERON:0003104,9.77e-07,61;UBERON:0009142,9.77e-07,61 | |||
|phase1_expression=0.480446541314382,0.697950815278722,0,0.30246421130683,1.00179145989269,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0.47997726838022,0.68822784320151,0.57423196411502,0,0.430942465371778,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,0.577703239502549,1.32987716286794,1.42918549383658,0,0,0,0,0,0,1.1330713617802,1.4192770370732,1.83546752161682,0.782391344348039,3.2703773457067,1.75748946187577,0.194429899074283,1.81982348112971,4.31257693094915,0,0,0,0.771778308107841,0,0,0,0,0,0.338844532069132,0,0,0,0,0.898800331555214,0.384218305321555,0.207379224616955,0.405017814995072,0,0.571301968807607,0.220868540951614,0.367472397644862,0.670918297127655,0,0,0,0.153606533256243,0.131886287730194,0.365950574409639,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,3.3319525066601,1.81371744256285,0,0,0,1.61910957491345,2.59910566979068,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,1.08245520505607,0.506719730950197,0,0.11418387971906,0,0,0.867426633830679,0.304465478312141,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0,0,3.72783522436244,0,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0,0,0,0,0.486723789203273,0.203678727700633,0.497627882440372,1.76905930903572,1.89397670297827,0.910843100738926,0.689706313300419,0.180062129805349,0.753524089178575,0.680364991513279,0.768682321709099,0.187403449119458,0.517406741478031,3.01795190105979,0.378212160335639,0.175951124163949,0.43839146485515,0.556094498451196,0,0,0.398068533636986,0,0,0,1.03562886267751,0.469052119962192,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,0,0.205809224758569,0,1.05780226665418,0.853153002140936,1.16118335930219,1.15980715189884,2.01683524623343,2.00140239460383,1.33157938278791,0.474529061544512,0.494096864172033,0,0,0.58489226135736,1.79763881730844,0.648414149624083,0.398282546508734,1.13800740571849,0.571242563048644,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0,0.156998727841375,0.123397163921801,2.37162101669719,0.83422552858047,0.786235980452812,1.12431056192427,1.01430060694251,1.4470629585145,1.52775511068852,2.01387296215567,0.324270453550071,0.823684239564244,1.43768206527355,0,2.18426371180192,4.2938409251009,4.66433275156972,0.482443521363367,0.184753190166605,0.189491411770485,0,1.01847051465113,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.478364305972461,0,0.518054945597687,0.144649058581512,0,0,0,0,0.80275294993896,0.35163505977661,0,0,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0,0.404810701674894,0.584511715822624,0,0,0.425820255624806,0.178065603667255,0,0.329940245945071,0,0.485561272309963,0.302323556964751,1.88605079755898,2.06711325016541,1.53717573971964,0.516856586336442,0,0.356497378384721,0.632073515871632,2.10837217149998,0,0.340439605753788,0.540183282093931,0.776152102696527,0.428674070063185,0.532020700926821,0.178368817602071,0.164549020602121,0,3.05073220482823,0.63549621259146,1.32317038832977,0,0.161464426695906,0,0,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0.474503990371703,0.406638934253697,0.86404272657441,1.25452977608681,1.31017538247707,0.404593039154462,0.743881101528023,0.26175594198403,1.42576470620972,1.24267862617385,0,0.598066184175915,0.330916980914195,0.583353565032143,0.258319646955462,0.337912250981556,0,0,0.314578033277133,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.443971906748129,0.986852422704233,0.671538465456314,0.386379188064381,16.8914227906064,9.52388446189778,1.2862102744744,2.00628841614145,0,0,0,0,0,0,0,0,0,0,1.764384908931,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.551530525350042,0.666740183404846,0.412070114477788,1.60459604795908,0.758091635291392,0.760437899670719,0.377252682772152,0.37456602987953,0.320125762024346,0.34461281373368,0,0.695305955669133,0.578727661391115,0,0.294397840268795,0.342869252385415,1.24233064311536,0,0.436039249896986,0.564656282491984,0.338458431566706,0,0,0.543216455383447,0.561142271657738,0.355905054372522,0.591026894253381,2.04615521584845,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Sgsm1 | |||
}} |
Revision as of 01:29, 6 August 2015
Short description: | p4@Sgsm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sgsm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:106 |
Association with transcript: | 17bp_to_ENSMUST00000112324_5end |
EntrezGene: | 52850 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 2.58e-09 | 23 |
sac | 2.58e-09 | 23 |
liver | 3.76e-08 | 22 |
epithelial sac | 3.76e-08 | 22 |
digestive gland | 3.76e-08 | 22 |
epithelium of foregut-midgut junction | 3.76e-08 | 22 |
anatomical boundary | 3.76e-08 | 22 |
hepatobiliary system | 3.76e-08 | 22 |
foregut-midgut junction | 3.76e-08 | 22 |
hepatic diverticulum | 3.76e-08 | 22 |
liver primordium | 3.76e-08 | 22 |
septum transversum | 3.76e-08 | 22 |
liver bud | 3.76e-08 | 22 |
exocrine gland | 5.01e-08 | 25 |
exocrine system | 5.01e-08 | 25 |
trunk mesenchyme | 5.20e-08 | 45 |
mesenchyme | 9.77e-07 | 61 |
entire embryonic mesenchyme | 9.77e-07 | 61 |