FFCP PHASE1:Mm9::chr4:57607581..57607599,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=847|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:57607581..57607599,+|id=chr4:57607581..57607599,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!9.31e-09!18;UBERON:0000948!9.31e-09!18;UBERON:0005498!9.31e-09!18;UBERON:0004140!9.31e-09!18;UBERON:0009881!9.31e-09!18;UBERON:0004141!9.31e-09!18;UBERON:0003084!9.31e-09!18;UBERON:0007005!9.31e-09!18;UBERON:0004139!9.31e-09!18;UBERON:0004291!9.31e-09!18;UBERON:0002048!3.21e-08!14;UBERON:0000117!3.21e-08!14;UBERON:0000171!3.21e-08!14;UBERON:0000170!3.21e-08!14;UBERON:0005597!3.21e-08!14;UBERON:0000118!3.21e-08!14;UBERON:0000468!1.84e-07!333;UBERON:0005157!1.93e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.19e-10,18;UBERON:0000948,3.19e-10,18;UBERON:0005498,3.19e-10,18;UBERON:0004140,3.19e-10,18;UBERON:0009881,3.19e-10,18;UBERON:0004141,3.19e-10,18;UBERON:0003084,3.19e-10,18;UBERON:0007005,3.19e-10,18;UBERON:0004139,3.19e-10,18;UBERON:0004291,3.19e-10,18;UBERON:0002048,1.65e-08,14;UBERON:0000117,1.65e-08,14;UBERON:0000171,1.65e-08,14;UBERON:0000170,1.65e-08,14;UBERON:0005597,1.65e-08,14;UBERON:0000118,1.65e-08,14;UBERON:0004535,1.56e-07,23;UBERON:0001009,1.56e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.514518872071894,0.573066879877513,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,1.65993539510744,0.614426133024974,0,0.0914876436024097,0.52091337055676,0,0.56276261003168,2.44477196442896,1.17851434189467,0.854230084794618,0.186399445825301,0,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0.340860645156116,1.03914401841148,0.70667914902068,0,0,0,0,0,0,0,0,0,1.92974780784272,0.693941307064543,4.26251669636998,2.30615497256059,5.12456977878917,13.1699351991989,4.27266410520897,0.988779870937496,1.59059292611903,0,2.91180329905337,3.09178125844551,1.45462575940567,0,0.585561594023094,0,0,0,0,0,1.79748767285787,2.28750301409313,0.879580464790051,0.347648640384553,1.02286182932132,0.83115217823824,1.94689515681309,3.7680564624617,0.746441823660558,0,1.47309299120532,1.69156575851515,0,0.360124259610698,3.31550599238573,2.04109497453984,2.94661556655154,1.40552586839593,4.13925393182425,1.5089759505299,1.89106080167819,2.46331573829528,0.657587197282725,7.50727572909114,1.0447564995665,1.23469281844766,0.796137067273973,0,0,0,9.73491130916859,16.1822981386956,11.884096056427,12.0739815148457,16.1346670032871,15.4267112887378,19.7653853037847,15.2915838797783,20.2004042295203,11.3546296440302,17.7300861205423,4.05344047729279,2.19299981137998,4.39100230582101,2.95254121272818,0.630869845692382,1.23485534855141,0,0,0.639864751605702,6.0381534683714,2.06187938115349,2.01683524623343,3.11329261382818,1.52180500890047,0.474529061544512,0.988193728344065,1.50801125280162,0.397912944082302,0.974820435595601,0,0.648414149624083,0.995706366271836,0.189667900953082,1.02823661348756,0,1.4255592949172,0.775809948670503,1.68325967736765,1.13825766823663,0.295220295959204,0.941992367048249,0.493588655687202,0,0.500535317148282,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,2.87536413054709,0.372140947668503,0.312037673114561,1.01031551178845,0.358794827043824,0,0.923765950833023,0.947457058852424,4.4000543639347,11.3729207469376,10.0916806764056,6.53274404023081,4.99891645860629,6.24427673144956,10.2462843669024,16.1669223443606,14.9887482538038,4.42430949732493,6.90739927463582,2.60368305446721,0,0,0.983528546038072,0,1.12385412991454,1.52375192569864,0,0.252470927204373,0,0,0.430846795465598,0,0,0,0,0,0.395287777946524,3.21321316421807,1.56134093729095,0.534196811001766,1.79175655288934,1.15479086080775,0,0.242780636154981,0,0.188605079755898,0,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,0.632073515871632,0,1.03135543248187,0,0.540183282093931,0.129358683782755,0.214337035031592,0.532020700926821,0.891844088010353,0.658196082408484,0,0,0.21183207086382,0.220528398054962,0.65954501176592,0.484393280087717,1.08563264870681,0.835606408021955,0.656563598980245,0.874442509889552,2.03967832211561,0,0.206386867963223,0.925972636848558,0.188368457004691,0,0.457556346413045,0,0,0,0,0.790839983952838,2.03319467126849,2.16010681643603,4.39085421630384,3.49380101993884,5.25970950900801,1.57041565878138,0.26175594198403,0.518459893167171,0.621339313086926,0,1.34564891439581,1.48912641411388,1.16670713006429,2.32487682259916,3.8859908862879,4.92900402312167,6.51021924219751,2.72634295506848,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.579568782096571,0.93841237725591,0.183151624267265,0.214368379079066,0,2.25900737046827,2.76195141904306,3.43737308063638,1.71853182343688,1.37016503954128,0.755393897389701,2.02506750069542,2.2516060161211,0.906284817968409,6.21312374102184,0.207574695168353,3.59122386060928,1.02440163452481,3.40349403895612,0,0,1.77797382241292,2.47242068686673,2.24643446714271,0.758091635291392,0.50695859978048,0.943131706930381,1.77918864192777,1.53660365771686,1.09127391015665,2.85776214769844,1.62238056322798,2.31491064556446,2.88460130562315,1.76638704161277,2.74295401908332,2.12970967391205,2.38436189947321,1.74415699958794,1.03520318456864,1.01537529470012,2.56099162021882,4.99832451731901,3.25929873230068,2.80571135828869,1.18635018124174,2.26560309463796,2.04615521584845,1.23949472948773,0.578719832943424,0.999242311751784,1.40358965067245,0.429742108096597,1.72159498861959,0.441182838239031,0.927471342481686|short_description=p@chr4:57607581..57607599,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=847 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:57607581..57607599,+ | |||
|description=CAGE_peak_at_chr4:57607581..57607599,+ | |||
|id=chr4:57607581..57607599,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!9.31e-09!18;UBERON:0000948!9.31e-09!18;UBERON:0005498!9.31e-09!18;UBERON:0004140!9.31e-09!18;UBERON:0009881!9.31e-09!18;UBERON:0004141!9.31e-09!18;UBERON:0003084!9.31e-09!18;UBERON:0007005!9.31e-09!18;UBERON:0004139!9.31e-09!18;UBERON:0004291!9.31e-09!18;UBERON:0002048!3.21e-08!14;UBERON:0000117!3.21e-08!14;UBERON:0000171!3.21e-08!14;UBERON:0000170!3.21e-08!14;UBERON:0005597!3.21e-08!14;UBERON:0000118!3.21e-08!14;UBERON:0000468!1.84e-07!333;UBERON:0005157!1.93e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.19e-10,18;UBERON:0000948,3.19e-10,18;UBERON:0005498,3.19e-10,18;UBERON:0004140,3.19e-10,18;UBERON:0009881,3.19e-10,18;UBERON:0004141,3.19e-10,18;UBERON:0003084,3.19e-10,18;UBERON:0007005,3.19e-10,18;UBERON:0004139,3.19e-10,18;UBERON:0004291,3.19e-10,18;UBERON:0002048,1.65e-08,14;UBERON:0000117,1.65e-08,14;UBERON:0000171,1.65e-08,14;UBERON:0000170,1.65e-08,14;UBERON:0005597,1.65e-08,14;UBERON:0000118,1.65e-08,14;UBERON:0004535,1.56e-07,23;UBERON:0001009,1.56e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.514518872071894,0.573066879877513,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,1.65993539510744,0.614426133024974,0,0.0914876436024097,0.52091337055676,0,0.56276261003168,2.44477196442896,1.17851434189467,0.854230084794618,0.186399445825301,0,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0.340860645156116,1.03914401841148,0.70667914902068,0,0,0,0,0,0,0,0,0,1.92974780784272,0.693941307064543,4.26251669636998,2.30615497256059,5.12456977878917,13.1699351991989,4.27266410520897,0.988779870937496,1.59059292611903,0,2.91180329905337,3.09178125844551,1.45462575940567,0,0.585561594023094,0,0,0,0,0,1.79748767285787,2.28750301409313,0.879580464790051,0.347648640384553,1.02286182932132,0.83115217823824,1.94689515681309,3.7680564624617,0.746441823660558,0,1.47309299120532,1.69156575851515,0,0.360124259610698,3.31550599238573,2.04109497453984,2.94661556655154,1.40552586839593,4.13925393182425,1.5089759505299,1.89106080167819,2.46331573829528,0.657587197282725,7.50727572909114,1.0447564995665,1.23469281844766,0.796137067273973,0,0,0,9.73491130916859,16.1822981386956,11.884096056427,12.0739815148457,16.1346670032871,15.4267112887378,19.7653853037847,15.2915838797783,20.2004042295203,11.3546296440302,17.7300861205423,4.05344047729279,2.19299981137998,4.39100230582101,2.95254121272818,0.630869845692382,1.23485534855141,0,0,0.639864751605702,6.0381534683714,2.06187938115349,2.01683524623343,3.11329261382818,1.52180500890047,0.474529061544512,0.988193728344065,1.50801125280162,0.397912944082302,0.974820435595601,0,0.648414149624083,0.995706366271836,0.189667900953082,1.02823661348756,0,1.4255592949172,0.775809948670503,1.68325967736765,1.13825766823663,0.295220295959204,0.941992367048249,0.493588655687202,0,0.500535317148282,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,2.87536413054709,0.372140947668503,0.312037673114561,1.01031551178845,0.358794827043824,0,0.923765950833023,0.947457058852424,4.4000543639347,11.3729207469376,10.0916806764056,6.53274404023081,4.99891645860629,6.24427673144956,10.2462843669024,16.1669223443606,14.9887482538038,4.42430949732493,6.90739927463582,2.60368305446721,0,0,0.983528546038072,0,1.12385412991454,1.52375192569864,0,0.252470927204373,0,0,0.430846795465598,0,0,0,0,0,0.395287777946524,3.21321316421807,1.56134093729095,0.534196811001766,1.79175655288934,1.15479086080775,0,0.242780636154981,0,0.188605079755898,0,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,0.632073515871632,0,1.03135543248187,0,0.540183282093931,0.129358683782755,0.214337035031592,0.532020700926821,0.891844088010353,0.658196082408484,0,0,0.21183207086382,0.220528398054962,0.65954501176592,0.484393280087717,1.08563264870681,0.835606408021955,0.656563598980245,0.874442509889552,2.03967832211561,0,0.206386867963223,0.925972636848558,0.188368457004691,0,0.457556346413045,0,0,0,0,0.790839983952838,2.03319467126849,2.16010681643603,4.39085421630384,3.49380101993884,5.25970950900801,1.57041565878138,0.26175594198403,0.518459893167171,0.621339313086926,0,1.34564891439581,1.48912641411388,1.16670713006429,2.32487682259916,3.8859908862879,4.92900402312167,6.51021924219751,2.72634295506848,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.579568782096571,0.93841237725591,0.183151624267265,0.214368379079066,0,2.25900737046827,2.76195141904306,3.43737308063638,1.71853182343688,1.37016503954128,0.755393897389701,2.02506750069542,2.2516060161211,0.906284817968409,6.21312374102184,0.207574695168353,3.59122386060928,1.02440163452481,3.40349403895612,0,0,1.77797382241292,2.47242068686673,2.24643446714271,0.758091635291392,0.50695859978048,0.943131706930381,1.77918864192777,1.53660365771686,1.09127391015665,2.85776214769844,1.62238056322798,2.31491064556446,2.88460130562315,1.76638704161277,2.74295401908332,2.12970967391205,2.38436189947321,1.74415699958794,1.03520318456864,1.01537529470012,2.56099162021882,4.99832451731901,3.25929873230068,2.80571135828869,1.18635018124174,2.26560309463796,2.04615521584845,1.23949472948773,0.578719832943424,0.999242311751784,1.40358965067245,0.429742108096597,1.72159498861959,0.441182838239031,0.927471342481686 | |||
|short_description=p@chr4:57607581..57607599,+ | |||
}} |
Latest revision as of 15:07, 5 August 2015
Short description: | p@chr4:57607581..57607599, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:57607581..57607599, + |
Coexpression cluster: | MCL_coexpression_mm9:847 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.19e-10 | 18 |
heart | 3.19e-10 | 18 |
primitive heart tube | 3.19e-10 | 18 |
primary heart field | 3.19e-10 | 18 |
anterior lateral plate mesoderm | 3.19e-10 | 18 |
heart tube | 3.19e-10 | 18 |
heart primordium | 3.19e-10 | 18 |
cardiac mesoderm | 3.19e-10 | 18 |
cardiogenic plate | 3.19e-10 | 18 |
heart rudiment | 3.19e-10 | 18 |
lung | 1.65e-08 | 14 |
respiratory tube | 1.65e-08 | 14 |
respiration organ | 1.65e-08 | 14 |
pair of lungs | 1.65e-08 | 14 |
lung primordium | 1.65e-08 | 14 |
lung bud | 1.65e-08 | 14 |
cardiovascular system | 1.56e-07 | 23 |
circulatory system | 1.56e-07 | 23 |