FFCP PHASE1:Mm9::chr4:47004714..47004788,-: Difference between revisions
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{{FFCP|EntrezGene=242425|HGNC=|MCL_coexpression_id=1|UniProt=Q80T41|association_with_transcript=0bp_to_ENSMUST00000107749_5end|description=CAGE_peak_2_at_Gabbr2_5end|id=chr4:47004714..47004788,-|ontology_enrichment_celltype=CL:0000117!6.10e-14!23;CL:0000337!6.10e-14!23;CL:0000540!3.82e-11!33;CL:0000047!3.82e-11!33;CL:0000031!3.82e-11!33;CL:0000404!3.82e-11!33;CL:0000221!1.15e-08!44;CL:0000133!1.15e-08!44;CL:0002319!2.06e-08!43;CL:0000393!1.29e-07!39;CL:0000211!1.29e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-17,23;CL:0000337,1.07e-17,23;CL:0000540,7.88e-10,33;CL:0000047,7.88e-10,33;CL:0000031,7.88e-10,33;CL:0000404,7.88e-10,33;CL:0000393,3.50e-07,39;CL:0000211,3.50e-07,39;CL:0000221,6.99e-07,44;CL:0000133,6.99e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.99e-25!75;UBERON:0001016!6.99e-25!75;UBERON:0001017!1.46e-24!73;UBERON:0005743!1.46e-24!73;UBERON:0000033!4.61e-24!63;UBERON:0001049!1.15e-22!52;UBERON:0005068!1.15e-22!52;UBERON:0006241!1.15e-22!52;UBERON:0007135!1.15e-22!52;UBERON:0000955!1.25e-21!50;UBERON:0006238!1.25e-21!50;UBERON:0002346!1.59e-21!71;UBERON:0003075!1.59e-21!71;UBERON:0007284!1.59e-21!71;UBERON:0004121!2.54e-21!102;UBERON:0000924!2.54e-21!102;UBERON:0006601!2.54e-21!102;UBERON:0002616!5.21e-21!49;UBERON:0003056!6.69e-21!49;UBERON:0002020!1.92e-18!34;UBERON:0003080!1.99e-17!40;UBERON:0002780!1.12e-16!39;UBERON:0001890!1.12e-16!39;UBERON:0006240!1.12e-16!39;UBERON:0002791!3.88e-15!29;UBERON:0003528!3.88e-15!29;UBERON:0001893!3.88e-15!29;UBERON:0007811!4.90e-13!86;UBERON:0000153!1.04e-11!94;UBERON:0000956!2.96e-10!21;UBERON:0001869!2.96e-10!21;UBERON:0000203!2.96e-10!21;UBERON:0002619!9.10e-09!17;UBERON:0002021!1.27e-08!10;UBERON:0000411!1.27e-08!10;UBERON:0001950!1.27e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.15e-31,54;UBERON:0002346,1.39e-29,64;UBERON:0003075,1.39e-29,64;UBERON:0007284,1.39e-29,64;UBERON:0001049,5.02e-29,52;UBERON:0005068,5.02e-29,52;UBERON:0006241,5.02e-29,52;UBERON:0007135,5.02e-29,52;UBERON:0001017,3.47e-26,73;UBERON:0001016,5.90e-25,75;UBERON:0010371,1.54e-24,73;UBERON:0000955,1.55e-24,47;UBERON:0006238,1.55e-24,47;UBERON:0003056,2.17e-24,49;UBERON:0002020,3.71e-24,34;UBERON:0002616,9.42e-24,46;UBERON:0004121,1.89e-23,95;UBERON:0000924,1.89e-23,95;UBERON:0006601,1.89e-23,95;UBERON:0003080,1.15e-21,40;UBERON:0002780,1.08e-20,39;UBERON:0001890,1.08e-20,39;UBERON:0006240,1.08e-20,39;UBERON:0003528,8.00e-20,29;UBERON:0002791,8.00e-20,29;UBERON:0001893,8.00e-20,29;UBERON:0010314,1.35e-15,92;UBERON:0000956,2.02e-13,21;UBERON:0001869,2.02e-13,21;UBERON:0000203,2.02e-13,21;UBERON:0002619,1.73e-11,17;UBERON:0002021,9.10e-11,10;UBERON:0000411,9.10e-11,10;UBERON:0001950,9.10e-11,10;UBERON:0000025,8.85e-09,114;UBERON:0003076,9.28e-08,12;UBERON:0003057,9.28e-08,12;UBERON:0002420,1.15e-07,8;UBERON:0007245,1.15e-07,8;UBERON:0010009,1.15e-07,8;UBERON:0010011,1.15e-07,8;UBERON:0000454,1.15e-07,8;UBERON:0004111,1.20e-07,122|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,7.22867966284093,0,0,0,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87505128729943,0,0,0,0,0,0,7.48570905180512,5.28990979272033,6.97214543856797,0,0,0.449949858640699,0,0,0.599200221036809,0,1.55534418462716,1.89008313664367,1.89292465216244,19.4242669394586,15.2399293256613,2.9397791811589,1.82106394934649,4.5960939330501,28.6301290598411,55.5439920670567,36.7119614482422,13.1886287730194,10.6125666578795,8.85552729946492,22.8930059181132,18.0084035210138,24.142123148736,24.7488011797881,20.3591503542717,17.1487490159277,0.454357159999104,0.906858721281426,0,0.860423876981386,2.03991400112325,0.539703191637817,1.29955283489534,2.24013443548668,1.82577746171277,0,0,0,1.69012103732017,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,38.0615036115011,54.0372503578714,0.255457055208591,0,0,0,30.8568717173935,17.3850229071078,7.03664371832041,30.9407289942252,31.1972857943003,34.2850273523274,30.9880812459417,0,0,0.505445516867349,2.52530227063769,0.260240885925407,0.689706313300419,2.16074555766419,2.71268672104287,4.96666443804693,5.25266253167884,5.24729657534481,2.84573707812917,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.3376933133365,11.0107935245834,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0,0,0.549122826376163,7.18841032636773,1.11642284300551,1.87222603868736,1.51547326768267,0.538192240565737,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,17.8211154886449,19.8087750340823,0,0,0.315508219416257,0,0.430846795465598,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,7.71171159412337,0,0,0.325773918707152,0.164970122972535,0,0.485561272309963,0.906970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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:242425 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80T41 | |||
|association_with_transcript=0bp_to_ENSMUST00000107749_5end | |||
|cluster_id=chr4:47004714..47004788,- | |||
|description=CAGE_peak_2_at_Gabbr2_5end | |||
|id=chr4:47004714..47004788,- | |||
|ontology_enrichment_celltype=CL:0000117!6.10e-14!23;CL:0000337!6.10e-14!23;CL:0000540!3.82e-11!33;CL:0000047!3.82e-11!33;CL:0000031!3.82e-11!33;CL:0000404!3.82e-11!33;CL:0000221!1.15e-08!44;CL:0000133!1.15e-08!44;CL:0002319!2.06e-08!43;CL:0000393!1.29e-07!39;CL:0000211!1.29e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-17,23;CL:0000337,1.07e-17,23;CL:0000540,7.88e-10,33;CL:0000047,7.88e-10,33;CL:0000031,7.88e-10,33;CL:0000404,7.88e-10,33;CL:0000393,3.50e-07,39;CL:0000211,3.50e-07,39;CL:0000221,6.99e-07,44;CL:0000133,6.99e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.99e-25!75;UBERON:0001016!6.99e-25!75;UBERON:0001017!1.46e-24!73;UBERON:0005743!1.46e-24!73;UBERON:0000033!4.61e-24!63;UBERON:0001049!1.15e-22!52;UBERON:0005068!1.15e-22!52;UBERON:0006241!1.15e-22!52;UBERON:0007135!1.15e-22!52;UBERON:0000955!1.25e-21!50;UBERON:0006238!1.25e-21!50;UBERON:0002346!1.59e-21!71;UBERON:0003075!1.59e-21!71;UBERON:0007284!1.59e-21!71;UBERON:0004121!2.54e-21!102;UBERON:0000924!2.54e-21!102;UBERON:0006601!2.54e-21!102;UBERON:0002616!5.21e-21!49;UBERON:0003056!6.69e-21!49;UBERON:0002020!1.92e-18!34;UBERON:0003080!1.99e-17!40;UBERON:0002780!1.12e-16!39;UBERON:0001890!1.12e-16!39;UBERON:0006240!1.12e-16!39;UBERON:0002791!3.88e-15!29;UBERON:0003528!3.88e-15!29;UBERON:0001893!3.88e-15!29;UBERON:0007811!4.90e-13!86;UBERON:0000153!1.04e-11!94;UBERON:0000956!2.96e-10!21;UBERON:0001869!2.96e-10!21;UBERON:0000203!2.96e-10!21;UBERON:0002619!9.10e-09!17;UBERON:0002021!1.27e-08!10;UBERON:0000411!1.27e-08!10;UBERON:0001950!1.27e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.15e-31,54;UBERON:0002346,1.39e-29,64;UBERON:0003075,1.39e-29,64;UBERON:0007284,1.39e-29,64;UBERON:0001049,5.02e-29,52;UBERON:0005068,5.02e-29,52;UBERON:0006241,5.02e-29,52;UBERON:0007135,5.02e-29,52;UBERON:0001017,3.47e-26,73;UBERON:0001016,5.90e-25,75;UBERON:0010371,1.54e-24,73;UBERON:0000955,1.55e-24,47;UBERON:0006238,1.55e-24,47;UBERON:0003056,2.17e-24,49;UBERON:0002020,3.71e-24,34;UBERON:0002616,9.42e-24,46;UBERON:0004121,1.89e-23,95;UBERON:0000924,1.89e-23,95;UBERON:0006601,1.89e-23,95;UBERON:0003080,1.15e-21,40;UBERON:0002780,1.08e-20,39;UBERON:0001890,1.08e-20,39;UBERON:0006240,1.08e-20,39;UBERON:0003528,8.00e-20,29;UBERON:0002791,8.00e-20,29;UBERON:0001893,8.00e-20,29;UBERON:0010314,1.35e-15,92;UBERON:0000956,2.02e-13,21;UBERON:0001869,2.02e-13,21;UBERON:0000203,2.02e-13,21;UBERON:0002619,1.73e-11,17;UBERON:0002021,9.10e-11,10;UBERON:0000411,9.10e-11,10;UBERON:0001950,9.10e-11,10;UBERON:0000025,8.85e-09,114;UBERON:0003076,9.28e-08,12;UBERON:0003057,9.28e-08,12;UBERON:0002420,1.15e-07,8;UBERON:0007245,1.15e-07,8;UBERON:0010009,1.15e-07,8;UBERON:0010011,1.15e-07,8;UBERON:0000454,1.15e-07,8;UBERON:0004111,1.20e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,7.22867966284093,0,0,0,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87505128729943,0,0,0,0,0,0,7.48570905180512,5.28990979272033,6.97214543856797,0,0,0.449949858640699,0,0,0.599200221036809,0,1.55534418462716,1.89008313664367,1.89292465216244,19.4242669394586,15.2399293256613,2.9397791811589,1.82106394934649,4.5960939330501,28.6301290598411,55.5439920670567,36.7119614482422,13.1886287730194,10.6125666578795,8.85552729946492,22.8930059181132,18.0084035210138,24.142123148736,24.7488011797881,20.3591503542717,17.1487490159277,0.454357159999104,0.906858721281426,0,0.860423876981386,2.03991400112325,0.539703191637817,1.29955283489534,2.24013443548668,1.82577746171277,0,0,0,1.69012103732017,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,38.0615036115011,54.0372503578714,0.255457055208591,0,0,0,30.8568717173935,17.3850229071078,7.03664371832041,30.9407289942252,31.1972857943003,34.2850273523274,30.9880812459417,0,0,0.505445516867349,2.52530227063769,0.260240885925407,0.689706313300419,2.16074555766419,2.71268672104287,4.96666443804693,5.25266253167884,5.24729657534481,2.84573707812917,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.3376933133365,11.0107935245834,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0,0,0.549122826376163,7.18841032636773,1.11642284300551,1.87222603868736,1.51547326768267,0.538192240565737,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,17.8211154886449,19.8087750340823,0,0,0.315508219416257,0,0.430846795465598,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,7.71171159412337,0,0,0.325773918707152,0.164970122972535,0,0.485561272309963,0.906970670894253,0.188605079755898,0.295301892880773,1.53717573971964,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,0,3.06395645178409,0,0.129358683782755,0.214337035031592,1.41872186913819,1.07021290561242,1.81003922662333,1.522324745573,0,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,15.3903000668723,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0,0.578574190077352,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.15241361331,0,0.0974578807397524,0,0.116876902181569,0,0.665957860122194,1.34570784914214,0.503653849092235,0,0,0,0,0,29.3670958160875,20.714635642823,28.6447756719698,28.3557750867085,26.718218271055,33.2373314851468,21.6007200074178,29.7211994127986,27.6416869480365,34.6899408873719,0.31136204275253,1.19707462020309,1.19513524027894,1.70174701947806,1.46729213839588,1.2869045591501,1.55572709461131,2.88449080134452,1.92551525755089,2.77966932940177,1.2673964994512,1.88626341386076,1.77918864192777,3.3293079250532,1.78049953762401,2.85776214769844,2.20180219295225,1.35036454324594,2.06042950401653,1.91358596174717,1.71434626192708,1.24233064311536,2.38436189947321,2.0348498328526,2.4468438907986,2.11536519729191,2.19513567447327,1.8414879800649,3.12349461845482,1.12228454331548,2.72860541685601,2.9551344712669,1.63692417267876,2.32405261778949,3.08650577569826,5.9954538705107,2.57324769289949,2.79332370262788,1.91288332068843,0.441182838239031,0.695603506861264 | |||
|short_description=p2@Gabbr2 | |||
}} |
Revision as of 13:18, 5 August 2015
Short description: | p2@Gabbr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gabbr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000107749_5end |
EntrezGene: | 242425 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.07e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.07e-17 | 23 |
neuron | 7.88e-10 | 33 |
neuronal stem cell | 7.88e-10 | 33 |
neuroblast | 7.88e-10 | 33 |
electrically signaling cell | 7.88e-10 | 33 |
electrically responsive cell | 3.50e-07 | 39 |
electrically active cell | 3.50e-07 | 39 |
ectodermal cell | 6.99e-07 | 44 |
neurectodermal cell | 6.99e-07 | 44 |