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FFCP PHASE1:Mm9::chr4:44085450..44085565,-: Difference between revisions

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{{FFCP|EntrezGene=50798|HGNC=|UniProt=G3UX49,G3UWV5,Q3TCI8,Q91WG8|association_with_transcript=0bp_to_ENSMUST00000133709,ENSMUST00000173383,NM_001190414,uc008srn.2_5end|description=CAGE_peak_1_at_Gne_5end|id=chr4:44085450..44085565,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!4.61e-14!114;UBERON:0000477!1.14e-13!154;UBERON:0004111!5.68e-13!122;UBERON:0000119!1.16e-08!183;UBERON:0001017!1.71e-08!73;UBERON:0005743!1.71e-08!73;UBERON:0000483!6.78e-08!181;UBERON:0000073!2.16e-07!75;UBERON:0001016!2.16e-07!75;UBERON:0002020!3.86e-07!34;UBERON:0002107!7.65e-07!22;UBERON:0007499!7.65e-07!22;UBERON:0006925!7.65e-07!22;UBERON:0009497!7.65e-07!22;UBERON:0000015!7.65e-07!22;UBERON:0002423!7.65e-07!22;UBERON:0006235!7.65e-07!22;UBERON:0008835!7.65e-07!22;UBERON:0003894!7.65e-07!22;UBERON:0004161!7.65e-07!22;UBERON:0008836!7.65e-07!22;UBERON:0005911!9.06e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.61e-14,114;UBERON:0011216,1.22e-13,194;UBERON:0004111,5.68e-13,122;UBERON:0000119,7.35e-11,176;UBERON:0000483,5.48e-10,174;UBERON:0001017,1.71e-08,73;UBERON:0001016,2.16e-07,75;UBERON:0002020,3.86e-07,34;UBERON:0000073,7.43e-07,54;UBERON:0002107,7.65e-07,22;UBERON:0007499,7.65e-07,22;UBERON:0006925,7.65e-07,22;UBERON:0009497,7.65e-07,22;UBERON:0000015,7.65e-07,22;UBERON:0002423,7.65e-07,22;UBERON:0006235,7.65e-07,22;UBERON:0008835,7.65e-07,22;UBERON:0003894,7.65e-07,22;UBERON:0004161,7.65e-07,22;UBERON:0008836,7.65e-07,22;UBERON:0005911,9.06e-07,69|phase1_expression=11.69086583865,8.72438519098403,24.1149596876454,36.5981695681264,36.064492556137,15.4448930158939,19.6234618100242,27.115897922731,3.37892933164,5.38348410540585,13.6974374580404,16.2735204350486,24.995306569956,25.7890187136042,11.9919514253639,13.970793449898,7.69518065940961,31.0730232877864,32.6332351981658,18.6731446791133,15.3928355173436,19.9574811913779,16.194386926614,18.879105889622,16.5174682368362,8.6134794617253,13.3536218809313,12.2818602630957,26.9833255628051,26.7151937545527,12.8603696180077,31.7515336729816,34.4436281047359,0,17.0422455653252,22.7741464141135,19.8044275574498,21.3451131675823,12.5013655123808,14.6586648312664,11.1763982725893,13.6609096991689,21.8479658864019,25.0534667771399,21.2891555560981,17.9875817118448,34.4252191513137,21.3664653252838,18.8930117151646,22.5538682926169,27.2973522169457,28.7505128729943,19.7983475148129,13.0565185562042,11.0910953717013,23.1533492432352,15.4728057566929,11.3447860301037,29.7405197463609,29.6234948392338,27.2547503507657,30.834852418291,40.0182658250013,18.4479442042687,15.8218618010716,17.0515227587064,17.3768064100675,18.8266969607562,18.1456821539836,23.2210213930508,18.718921560273,23.9946826899195,24.9581451275323,23.3957426500562,19.6483215587385,21.1420320920305,23.1243350098716,24.8990309266116,27.8027825193801,27.1685752724199,30.373897676,25.0038417867245,27.080750903134,27.5753678915523,25.6701056265041,22.6864010814724,22.6370972470574,27.9599168737951,6.96680978665293,9.59758813356176,16.8121403446973,20.6501730475533,10.879541339324,49.6526936306792,43.5350199689938,47.4908500323176,20.926218599631,12.6118438707763,8.57293815189467,12.0135455333516,12.8167511996779,14.115912515575,17.8363667794652,14.2213340630666,8.01016851741492,5.57391704045217,9.0994400102661,23.4076953424073,26.4116641320115,18.4068252440383,11.6235168933311,10.9607572192371,8.76338889573022,10.5505848386836,13.1699351991989,14.0746582289237,14.3373081285937,28.7752720270624,27.4229271104461,22.3238252927425,21.863310327579,19.8798853785441,11.1835056730873,17.8596286177044,22.4107976290397,31.4212177906567,8.50687383992034,14.3976655438418,7.87835407853001,24.8652461412006,24.7050325522058,27.3926487606044,27.9857155509565,20.9686675010871,26.1812936145046,21.9025705141473,13.1372779366908,23.3885104746975,16.9324248150562,47.7703012862296,11.840960309606,11.0353010128067,10.803727788321,11.6042709733501,13.3351538336603,15.6298738747517,15.7418897260344,25.8703370739016,15.3053274982318,10.0226222488944,12.8444320639683,18.4124415239163,16.1267404550847,17.0643561595862,13.3758388665163,10.7478504081986,13.3420505589515,10.5512641917033,10.7982129770325,18.4341937556597,18.0585066185444,17.1058958387964,22.0172604094246,26.3664070541521,20.3632589011339,23.4859284197912,24.681152928765,23.3530684734339,22.8738191379738,22.1626076506779,23.9963676255733,21.4913981515238,24.1505126820156,24.0229489581065,28.5994330047213,26.5493899938554,23.7901523748335,21.9493970330742,10.2378360256912,13.237490296045,18.6857818917035,20.1683524623343,24.016828735246,17.1203063501303,25.6245693234036,20.5873693405014,19.604146286421,16.3144307073744,19.3014446247929,21.5716658077013,23.7751854862164,30.6677560811725,12.1387456609972,13.1385789501188,11.270773567308,13.0336849821001,12.8008641530633,14.1674356178443,18.8444880630287,22.5843526408791,21.9798218977925,27.02397889887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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:50798
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:G3UX49,uniprot:G3UWV5,uniprot:Q3TCI8,uniprot:Q91WG8
|association_with_transcript=0bp_to_ENSMUST00000133709,ENSMUST00000173383,NM_001190414,uc008srn.2_5end
|cluster_id=chr4:44085450..44085565,-
|description=CAGE_peak_1_at_Gne_5end
|id=chr4:44085450..44085565,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!4.61e-14!114;UBERON:0000477!1.14e-13!154;UBERON:0004111!5.68e-13!122;UBERON:0000119!1.16e-08!183;UBERON:0001017!1.71e-08!73;UBERON:0005743!1.71e-08!73;UBERON:0000483!6.78e-08!181;UBERON:0000073!2.16e-07!75;UBERON:0001016!2.16e-07!75;UBERON:0002020!3.86e-07!34;UBERON:0002107!7.65e-07!22;UBERON:0007499!7.65e-07!22;UBERON:0006925!7.65e-07!22;UBERON:0009497!7.65e-07!22;UBERON:0000015!7.65e-07!22;UBERON:0002423!7.65e-07!22;UBERON:0006235!7.65e-07!22;UBERON:0008835!7.65e-07!22;UBERON:0003894!7.65e-07!22;UBERON:0004161!7.65e-07!22;UBERON:0008836!7.65e-07!22;UBERON:0005911!9.06e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.61e-14,114;UBERON:0011216,1.22e-13,194;UBERON:0004111,5.68e-13,122;UBERON:0000119,7.35e-11,176;UBERON:0000483,5.48e-10,174;UBERON:0001017,1.71e-08,73;UBERON:0001016,2.16e-07,75;UBERON:0002020,3.86e-07,34;UBERON:0000073,7.43e-07,54;UBERON:0002107,7.65e-07,22;UBERON:0007499,7.65e-07,22;UBERON:0006925,7.65e-07,22;UBERON:0009497,7.65e-07,22;UBERON:0000015,7.65e-07,22;UBERON:0002423,7.65e-07,22;UBERON:0006235,7.65e-07,22;UBERON:0008835,7.65e-07,22;UBERON:0003894,7.65e-07,22;UBERON:0004161,7.65e-07,22;UBERON:0008836,7.65e-07,22;UBERON:0005911,9.06e-07,69
|phase1_expression=11.69086583865,8.72438519098403,24.1149596876454,36.5981695681264,36.064492556137,15.4448930158939,19.6234618100242,27.115897922731,3.37892933164,5.38348410540585,13.6974374580404,16.2735204350486,24.995306569956,25.7890187136042,11.9919514253639,13.970793449898,7.69518065940961,31.0730232877864,32.6332351981658,18.6731446791133,15.3928355173436,19.9574811913779,16.194386926614,18.879105889622,16.5174682368362,8.6134794617253,13.3536218809313,12.2818602630957,26.9833255628051,26.7151937545527,12.8603696180077,31.7515336729816,34.4436281047359,0,17.0422455653252,22.7741464141135,19.8044275574498,21.3451131675823,12.5013655123808,14.6586648312664,11.1763982725893,13.6609096991689,21.8479658864019,25.0534667771399,21.2891555560981,17.9875817118448,34.4252191513137,21.3664653252838,18.8930117151646,22.5538682926169,27.2973522169457,28.7505128729943,19.7983475148129,13.0565185562042,11.0910953717013,23.1533492432352,15.4728057566929,11.3447860301037,29.7405197463609,29.6234948392338,27.2547503507657,30.834852418291,40.0182658250013,18.4479442042687,15.8218618010716,17.0515227587064,17.3768064100675,18.8266969607562,18.1456821539836,23.2210213930508,18.718921560273,23.9946826899195,24.9581451275323,23.3957426500562,19.6483215587385,21.1420320920305,23.1243350098716,24.8990309266116,27.8027825193801,27.1685752724199,30.373897676,25.0038417867245,27.080750903134,27.5753678915523,25.6701056265041,22.6864010814724,22.6370972470574,27.9599168737951,6.96680978665293,9.59758813356176,16.8121403446973,20.6501730475533,10.879541339324,49.6526936306792,43.5350199689938,47.4908500323176,20.926218599631,12.6118438707763,8.57293815189467,12.0135455333516,12.8167511996779,14.115912515575,17.8363667794652,14.2213340630666,8.01016851741492,5.57391704045217,9.0994400102661,23.4076953424073,26.4116641320115,18.4068252440383,11.6235168933311,10.9607572192371,8.76338889573022,10.5505848386836,13.1699351991989,14.0746582289237,14.3373081285937,28.7752720270624,27.4229271104461,22.3238252927425,21.863310327579,19.8798853785441,11.1835056730873,17.8596286177044,22.4107976290397,31.4212177906567,8.50687383992034,14.3976655438418,7.87835407853001,24.8652461412006,24.7050325522058,27.3926487606044,27.9857155509565,20.9686675010871,26.1812936145046,21.9025705141473,13.1372779366908,23.3885104746975,16.9324248150562,47.7703012862296,11.840960309606,11.0353010128067,10.803727788321,11.6042709733501,13.3351538336603,15.6298738747517,15.7418897260344,25.8703370739016,15.3053274982318,10.0226222488944,12.8444320639683,18.4124415239163,16.1267404550847,17.0643561595862,13.3758388665163,10.7478504081986,13.3420505589515,10.5512641917033,10.7982129770325,18.4341937556597,18.0585066185444,17.1058958387964,22.0172604094246,26.3664070541521,20.3632589011339,23.4859284197912,24.681152928765,23.3530684734339,22.8738191379738,22.1626076506779,23.9963676255733,21.4913981515238,24.1505126820156,24.0229489581065,28.5994330047213,26.5493899938554,23.7901523748335,21.9493970330742,10.2378360256912,13.237490296045,18.6857818917035,20.1683524623343,24.016828735246,17.1203063501303,25.6245693234036,20.5873693405014,19.604146286421,16.3144307073744,19.3014446247929,21.5716658077013,23.7751854862164,30.6677560811725,12.1387456609972,13.1385789501188,11.270773567308,13.0336849821001,12.8008641530633,14.1674356178443,18.8444880630287,22.5843526408791,21.9798218977925,27.0239788988743,38.5388415213294,22.6909343773888,22.6042844380183,21.586762788946,23.9374943238433,24.8412474544989,21.1339456978578,22.4402987211632,35.6697498905078,24.9850886001154,31.629005436018,34.2369671855023,45.2454626016113,52.2838277350521,48.975493891482,54.5161179140605,31.9623018988226,12.6959245886225,17.4372524792968,17.6534889206196,18.0711491182147,17.253144516507,27.3750187018916,19.1230974900643,22.6994607512915,23.4752571027701,23.9182152986231,26.2181303545181,24.3485824430913,25.458234310346,7.53956419696361,6.52686820582452,7.37646409528554,32.2845993176537,26.0091955780223,27.5447463491677,7.70494243270374,15.6531974866711,19.8770178232242,22.2550084249084,15.2950612390287,23.6579109973027,22.7254647564042,17.2676683781188,25.9078849071932,22.7959569170823,19.3691011193797,22.4924921495265,15.4714692877013,15.6697731227185,15.6371480979433,21.7760562323747,25.2215762845929,13.352934988524,13.302236506449,13.9567759019365,23.0335476447003,17.2163682848599,20.1574068671212,13.4507479906677,13.9033977570041,21.1744627816997,12.6502330289999,27.8465966770104,28.5969268833182,7.74262704334634,12.9358683782754,12.6458850668639,11.1724347194632,14.4478742257677,11.5184314421485,24.0527309800533,19.477751769288,31.774810629573,33.0792597082443,14.6748765117917,10.9795810153216,11.1578911117088,9.31104283224465,10.0125948844487,30.8969686827642,31.1514507377656,21.0171183381359,20.0195261924326,21.6677597022563,18.271740329455,19.8206630195487,17.6159193369022,10.7086410896129,10.216456019627,11.746997773376,20.0480829783174,11.5462637657114,15.2489600345137,18.6849239621716,19.4452115293456,19.2159056096636,18.3415511083356,21.655205400038,19.3699397068182,16.0722566881823,19.8828580187816,7.32800820289447,18.2410186173654,19.5241018739375,20.222923587781,21.8280101677366,24.4986381961628,22.5325898199848,20.7024971901881,12.3734026422339,5.55643477899814,6.33666013767304,20.2247117202034,26.3542779877213,23.8289420622399,23.7755106049365,25.9588708717848,25.2325320572206,24.2794808030337,21.5626709674883,18.476860340511,24.7672121628749,22.4842392855154,21.5381916434853,22.5135709438371,25.479164675582,10.8830584135301,12.4312133889476,20.6341870201794,15.7811539382234,22.0236137196697,15.9530104133505,15.7510396869848,7.71726164684637,29.0911820340511,20.8958181768315,24.8575627713876,20.0513429703789,20.1068223342114,24.6629707117431,30.215755895588,19.5756525067224,24.3173449741079,25.8291173120997,26.4057758993428,11.727970277012,17.9561193030464,16.561159758151,19.6916440825318,20.5420899375423,22.4289080309017,15.5572709461131,18.1310850370227,17.9714757371417,14.1510438587727,16.7296337927558,20.1830185283102,18.4473769715668,17.5428917589342,16.1968022454829,19.528041342606,19.7003354106254,19.2909220463705,17.3076078337389,17.3694725758589,17.8292011240416,16.6827257789777,15.4983523465759,16.7148379127178,19.0100948438968,18.3613699124938,20.6708609346233,16.0472523977084,17.9261430276538,18.5176949647054,18.388427809247,16.6472575214702,22.9169384175026,19.2121683070598,21.798447040869,23.9818154820428,14.2698281151699,17.8342974860088,20.2765631992974,16.7649478530832,16.9263520002908
|short_description=p1@Gne
}}

Revision as of 12:16, 5 August 2015

Short description:p1@Gne
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gne_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000133709, ENSMUST00000173383, NM_001190414, uc008srn.2_5end
EntrezGene:50798
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gne

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I336.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I436.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.44
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.62
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.12
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F116.27
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E425.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.07
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.63
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D118.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.52
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I212.28
Ileum epithelium, pool1.CNhs13199.10252-104B926.98
Ileum epithelium, pool2.CNhs13232.10253-104C126.72
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I331.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G634.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F622.77
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H421.85
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D921.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.99
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B734.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.37
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.89
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C322.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C427.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C428.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.80
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C123.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C329.74
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C630.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D140.02
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E715.82
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.05
Mouse Microglia, donor1.CNhs12629.11718-123C817.38
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.80
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D427.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F430.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.69
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.64
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.96
Mouse Schwann, donor1.CNhs12507.11728-123D96.97
Mouse Schwann, donor2.CNhs12573.11746-123F99.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F720.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C849.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F443.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F647.49
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.41
accessory axillary lymph node, adult.CNhs10475.1063-29H926.41
adrenal gland, adult.CNhs10508.49-24D718.41
adrenal gland, embryo E14.CNhs11038.406-44C511.62
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I18.76
adrenal gland, embryo E18.CNhs11026.1262-18F510.55
adrenal gland, neonate N00.CNhs11191.1311-23C113.17
adrenal gland, neonate N25.CNhs11223.1377-27I314.07
amnion, adult pregnant day17.5.CNhs10488.583-22A814.34
aorta, adult.CNhs10498.46-23H128.78
bone (os femoris), adult.CNhs10483.56-12G227.42
bone (os femoris), neonate N02.CNhs11227.1985-43F522.32
bone (os femoris), neonate N16.CNhs11225.1525-43A621.86
bone (os femoris), neonate N20.CNhs11195.1350-25C319.88
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B217.86
cerebellum, neonate N30.CNhs11135.1395-42I222.41
colon, adult.CNhs10468.36-18H731.42
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.51
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.88
corpora quadrigemina, adult.CNhs10501.16-22A424.87
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F127.39
cortex, adult.CNhs10473.12-14D527.99
cortex, neonate N30.CNhs11107.1392-42F220.97
diencephalon, adult.CNhs10482.20-12F226.18
diencephalon, neonate N30.CNhs11201.1388-42B221.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A223.39
epididymis, adult.CNhs10490.58-23B216.93
eyeball, adult.CNhs10484.31-12G447.77
eyeball, embryo E12.CNhs11016.345-16C611.84
eyeball, embryo E14.CNhs10521.399-16E211.04
eyeball, embryo E15.CNhs10593.426-16C910.80
eyeball, embryo E17.CNhs11023.1261-18D411.60
eyeball, neonate N00.CNhs11207.633-15C613.34
eyeball, neonate N01.CNhs11140.1532-43E715.63
eyeball, neonate N02.CNhs11205.1551-44G815.74
eyeball, neonate N16.CNhs11188.777-19A225.87
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H210.02
forelimb, embryo E13.CNhs10589.384-1E212.84
forelimb, embryo E14.CNhs10577.413-26A818.41
forelimb, embryo E15.CNhs11007.437-20E716.13
forelimb, embryo E17.CNhs10598.1517-43C417.06
forelimb, embryo E18.CNhs11008.1520-43B513.38
gonad, embryo E13.CNhs11044.1564-45I610.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.55
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.80
heart, embryo E11.CNhs10586.331-24E918.43
heart, embryo E12.CNhs11015.353-12F518.06
heart, embryo E13.CNhs11013.376-3I917.11
heart, embryo E14.CNhs10597.403-26D422.02
heart, embryo E15.CNhs11017.431-16C826.37
heart, embryo E16.CNhs11021.457-17C620.36
heart, embryo E17.CNhs11025.479-18E523.49
heart, embryo E18.CNhs11030.1283-20G324.68
heart, neonate N00.CNhs11213.639-21E323.35
heart, neonate N03.CNhs11221.1349-25I222.87
heart, neonate N10.CNhs11118.749-24G122.16
heart, neonate N16.CNhs11209.782-15G124.00
heart, neonate N20.CNhs11127.821-26I621.49
heart, neonate N25.CNhs11196.1351-25D324.15
heart, neonate N30.CNhs11202.1390-42D224.02
hippocampus, adult.CNhs10478.13-16E828.60
hippocampus, neonate N00.CNhs11228.627-43G126.55
intestinal mucosa, adult.CNhs10506.860-29I323.79
intestine, adult.CNhs10496.178-9A321.95
intestine, embryo E12.CNhs11019.1251-16I510.24
intestine, embryo E13.CNhs11010.381-16D513.24
intestine, embryo E15.CNhs10602.976-16D818.69
intestine, embryo E16.CNhs10585.463-22H420.17
intestine, embryo E17.CNhs10582.482-18D324.02
intestine, embryo E18.CNhs10526.1289-20F717.12
intestine, neonate N00.CNhs11126.644-26D125.62
intestine, neonate N01.CNhs11192.1322-23E920.59
intestine, neonate N06.CNhs11102.688-20B819.60
intestine, neonate N07.CNhs11095.720-20F216.31
intestine, neonate N10.CNhs11098.755-23A519.30
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E323.78
intestine, neonate N30.CNhs11131.1384-42G130.67
kidney, embryo E14.CNhs10606.411-4I912.14
kidney, embryo E15.CNhs10997.434-16F813.14
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I213.03
kidney, embryo E18.CNhs11001.1288-20C712.80
kidney, neonate N00.CNhs11214.646-21G714.17
kidney, neonate N10.CNhs11206.758-6D518.84
kidney, neonate N20.CNhs11113.832-19I122.58
kidney, neonate N25.CNhs11122.1353-25F321.98
kidney, neonate N30.CNhs11203.1385-42H127.02
liver, adult pregnant day01.CNhs10466.508-5B238.54
liver, embryo E12.CNhs10601.355-15F822.69
liver, embryo E13.CNhs10524.378-3H622.60
liver, embryo E14.CNhs10594.409-16E121.59
liver, embryo E15.CNhs10520.433-16D723.94
liver, embryo E16.CNhs10523.462-17F524.84
liver, embryo E17.CNhs10510.481-18A321.13
liver, embryo E18.CNhs10579.499-43G422.44
liver, neonate N00.CNhs11117.641-24F435.67
liver, neonate N03.CNhs11123.1345-25G224.99
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H234.24
liver, neonate N10.CNhs11115.751-24B945.25
liver, neonate N20.CNhs11220.823-25A352.28
liver, neonate N25.CNhs11198.1368-26H148.98
liver, neonate N30.CNhs11106.1382-42D154.52
lung, adult.CNhs10474.28-22B131.96
lung, embryo E12.CNhs10522.354-16G212.70
lung, embryo E14.CNhs10604.404-26F817.44
lung, embryo E15.CNhs11020.432-17C517.65
lung, embryo E16.CNhs10998.458-17B618.07
lung, embryo E17.CNhs10605.480-44A617.25
lung, embryo E18.CNhs10583.1287-20I627.38
lung, neonate N00.CNhs11224.640-42C619.12
lung, neonate N06.CNhs11212.683-20E522.70
lung, neonate N07.CNhs11111.715-19A323.48
lung, neonate N10.CNhs11219.750-23E623.92
lung, neonate N20.CNhs11109.822-18A426.22
lung, neonate N25.CNhs11119.1359-25C724.35
lung, neonate N30.CNhs11133.1394-42H225.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H232.28
medulla oblongata, adult.CNhs10477.17-12C226.01
medulla oblongata, neonate N30.CNhs11200.1396-42A327.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.70
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.65
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E222.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.66
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D822.73
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.37
olfactory brain, adult.CNhs10489.18-22I922.49
ovary, adult.CNhs10507.91-2I715.47
ovary, embryo E18.CNhs11040.505-44H715.67
ovary, neonate N00.CNhs11217.1299-22I415.64
oviduct, adult pregnant day01.CNhs10500.988-6G621.78
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F413.35
pancreas, embryo E15.CNhs11042.1556-45F213.30
pancreas, embryo E16.CNhs11003.460-26E513.96
pancreas, embryo E17.CNhs10599.1558-45G323.03
pancreas, embryo E18.CNhs10580.1535-43I717.22
pancreas, neonate N00.CNhs11105.645-26G920.16
pancreas, neonate N01.CNhs11138.1531-43D713.45
pancreas, neonate N02.CNhs11139.1539-43D813.90
pancreas, neonate N16.CNhs11136.787-43B621.17
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G828.60
pituitary gland, embryo E12.CNhs11018.346-16E67.74
pituitary gland, embryo E13.CNhs11009.370-44C712.94
pituitary gland, embryo E14.CNhs11037.398-44A512.65
pituitary gland, embryo E15.CNhs10592.427-16B911.17
pituitary gland, embryo E16.CNhs11036.449-43F614.45
pituitary gland, embryo E17.CNhs11039.1265-44F511.52
pituitary gland, neonate N00.CNhs11190.1308-22E924.05
placenta, adult pregnant day10.CNhs10472.539-13I719.48
placenta, adult pregnant day17.CNhs10464.577-18G331.77
prostate, adult.CNhs10470.859-1F833.08
skin, adult.CNhs10492.30-1C314.67
skin, neonate N00.CNhs11124.650-25G410.98
skin, neonate N03.CNhs11215.662-22H311.16
skin, neonate N06.CNhs11097.693-20I59.31
skin, neonate N10.CNhs11108.762-6C410.01
small intestine, neonate N16.CNhs11114.790-21I130.90
spinal cord, adult.CNhs10505.24-13C931.15
spleen, adult.CNhs10465.25-2G221.02
spleen, embryo E16.CNhs11035.461-43C120.02
spleen, embryo E18.CNhs11011.1271-21F221.67
spleen, neonate N10.CNhs11116.752-24D118.27
spleen, neonate N20.CNhs11112.824-19H119.82
spleen, neonate N25.CNhs11099.1354-25G317.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.75
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E311.55
stomach, embryo E15.CNhs10603.1252-16G815.25
stomach, embryo E16.CNhs11022.459-17D418.68
stomach, embryo E17.CNhs11006.1035-18D519.45
stomach, embryo E18.CNhs10999.1286-20C619.22
stomach, neonate N03.CNhs11193.1340-24B818.34
stomach, neonate N07.CNhs11210.718-18A921.66
stomach, neonate N25.CNhs11104.1355-25E419.37
stomach, neonate N30.CNhs11134.1386-42I116.07
submandibular gland, adult.CNhs10469.59-29C119.88
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F518.24
testis, embryo E15.CNhs11034.443-27C519.52
testis, embryo E16.CNhs11033.470-26G520.22
testis, embryo E17.CNhs11029.486-18I521.83
testis, embryo E18.CNhs11027.503-18G524.50
testis, neonate N00.CNhs11189.1300-22B722.53
testis, neonate N07.CNhs11222.726-26I420.70
testis, neonate N10.CNhs11204.763-44D912.37
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B520.22
thymus, embryo E14.CNhs11041.402-44I426.35
thymus, embryo E15.CNhs11005.430-45I223.83
thymus, embryo E16.CNhs11002.456-26C523.78
thymus, embryo E17.CNhs10581.478-18C125.96
thymus, embryo E18.CNhs10595.1273-19G425.23
thymus, neonate N02.CNhs11181.1541-43F824.28
thymus, neonate N03.CNhs11137.2104-43C721.56
thymus, neonate N06.CNhs11197.681-26C418.48
thymus, neonate N07.CNhs11211.713-19D324.77
thymus, neonate N10.CNhs11194.748-24E422.48
thymus, neonate N20.CNhs11186.820-7A221.54
thymus, neonate N25.CNhs11125.1362-25G722.51
thymus, neonate N30.CNhs11132.1393-42G225.48
tongue, adult.CNhs10499.32-1B410.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.78
urinary bladder, adult.CNhs10481.879-12E422.02
uterus, adult pregnant day19.CNhs10497.590-15F515.95
uterus, adult.CNhs10509.92-27E515.75
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F829.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.41
whole body, embryo E11.CNhs11014.324-5I811.73
whole body, embryo E12.CNhs10587.857-27C917.96
whole body, embryo E13.CNhs10512.372-23H216.56
whole body, embryo E14.5.CNhs10578.420-27D219.69
whole body, embryo E14.CNhs10519.395-14B120.54
whole body, embryo E16.CNhs10514.453-14F222.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.97
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.15
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.20
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.29
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.71
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.92
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.21
whole body, embryo E17.5.CNhs10513.490-9F921.80
whole body, embryo E17.CNhs10517.475-3I523.98
whole body, embryo E18.CNhs10516.493-3B314.27
whole body, neonate N00.CNhs10525.657-19C217.83
whole body, neonate N01.CNhs10576.659-23C620.28
whole body, neonate N06.CNhs10515.692-21D116.76
whole body, neonate N10.CNhs10518.761-6B416.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube4.61e-14114
organ system subdivision1.22e-13194
anatomical conduit5.68e-13122
cell layer7.35e-11176
epithelium5.48e-10174
central nervous system1.71e-0873
nervous system2.16e-0775
gray matter3.86e-0734
regional part of nervous system7.43e-0754
liver7.65e-0722
epithelial sac7.65e-0722
digestive gland7.65e-0722
epithelium of foregut-midgut junction7.65e-0722
anatomical boundary7.65e-0722
hepatobiliary system7.65e-0722
foregut-midgut junction7.65e-0722
hepatic diverticulum7.65e-0722
liver primordium7.65e-0722
septum transversum7.65e-0722
liver bud7.65e-0722
endo-epithelium9.06e-0769
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