FFCP PHASE1:Mm9::chr4:41587211..41587266,-: Difference between revisions
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{{FFCP|EntrezGene=69638|HGNC=|MCL_coexpression_id=87|UniProt=Q8C7D8,Q8K1D8|association_with_transcript=68bp_to_NM_027147,uc008sjd.2_5end|description=CAGE_peak_3_at_Enho_5end|id=chr4:41587211..41587266,-|ontology_enrichment_celltype=CL:0000117!1.29e-16!23;CL:0000337!1.29e-16!23;CL:0000540!2.78e-14!33;CL:0000047!2.78e-14!33;CL:0000031!2.78e-14!33;CL:0000404!2.78e-14!33;CL:0000221!1.79e-13!44;CL:0000133!1.79e-13!44;CL:0002319!4.51e-13!43;CL:0000393!2.78e-10!39;CL:0000211!2.78e-10!39;CL:0000055!2.78e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-22,23;CL:0000337,1.26e-22,23;CL:0000540,5.12e-14,33;CL:0000047,5.12e-14,33;CL:0000031,5.12e-14,33;CL:0000404,5.12e-14,33;CL:0000221,1.34e-11,44;CL:0000133,1.34e-11,44;CL:0002319,4.18e-11,43;CL:0000393,2.30e-10,39;CL:0000211,2.30e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.27e-27!73;UBERON:0005743!1.27e-27!73;UBERON:0000073!2.15e-26!75;UBERON:0001016!2.15e-26!75;UBERON:0004121!3.84e-26!102;UBERON:0000924!3.84e-26!102;UBERON:0006601!3.84e-26!102;UBERON:0000033!3.32e-24!63;UBERON:0001049!8.43e-24!52;UBERON:0005068!8.43e-24!52;UBERON:0006241!8.43e-24!52;UBERON:0007135!8.43e-24!52;UBERON:0002346!4.88e-23!71;UBERON:0003075!4.88e-23!71;UBERON:0007284!4.88e-23!71;UBERON:0000955!5.44e-22!50;UBERON:0006238!5.44e-22!50;UBERON:0002616!1.68e-21!49;UBERON:0002020!6.44e-20!34;UBERON:0003056!2.27e-19!49;UBERON:0003080!2.75e-17!40;UBERON:0002780!8.56e-17!39;UBERON:0001890!8.56e-17!39;UBERON:0006240!8.56e-17!39;UBERON:0002791!3.13e-16!29;UBERON:0003528!3.13e-16!29;UBERON:0001893!3.13e-16!29;UBERON:0007811!1.57e-11!86;UBERON:0000956!4.33e-11!21;UBERON:0001869!4.33e-11!21;UBERON:0000203!4.33e-11!21;UBERON:0000153!4.96e-11!94;UBERON:0002619!6.52e-09!17;UBERON:0003076!3.75e-07!12;UBERON:0003057!3.75e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.48e-31,54;UBERON:0001049,8.39e-29,52;UBERON:0005068,8.39e-29,52;UBERON:0006241,8.39e-29,52;UBERON:0007135,8.39e-29,52;UBERON:0001017,9.34e-29,73;UBERON:0002346,1.65e-28,64;UBERON:0003075,1.65e-28,64;UBERON:0007284,1.65e-28,64;UBERON:0001016,2.12e-27,75;UBERON:0002020,4.70e-26,34;UBERON:0004121,5.36e-25,95;UBERON:0000924,5.36e-25,95;UBERON:0006601,5.36e-25,95;UBERON:0010371,5.58e-25,73;UBERON:0000955,1.22e-23,47;UBERON:0006238,1.22e-23,47;UBERON:0003056,1.79e-23,49;UBERON:0002616,5.55e-23,46;UBERON:0003080,1.46e-21,40;UBERON:0003528,6.19e-21,29;UBERON:0002791,6.19e-21,29;UBERON:0001893,6.19e-21,29;UBERON:0002780,7.00e-21,39;UBERON:0001890,7.00e-21,39;UBERON:0006240,7.00e-21,39;UBERON:0010314,2.30e-16,92;UBERON:0000956,8.19e-14,21;UBERON:0001869,8.19e-14,21;UBERON:0000203,8.19e-14,21;UBERON:0002619,8.36e-11,17;UBERON:0002420,2.00e-08,8;UBERON:0007245,2.00e-08,8;UBERON:0010009,2.00e-08,8;UBERON:0010011,2.00e-08,8;UBERON:0000454,2.00e-08,8;UBERON:0002021,5.03e-08,10;UBERON:0000411,5.03e-08,10;UBERON:0001950,5.03e-08,10;UBERON:0003076,1.19e-07,12;UBERON:0003057,1.19e-07,12;UBERON:0002240,4.90e-07,6;UBERON:0005174,4.90e-07,6;UBERON:0001137,4.90e-07,6|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0.496454756004426,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0.782391344348039,0.65407546914134,1.09843091367236,0.972149495371417,0.55994568650145,0,0,0,0,0.514518872071894,0,0,36.214646493868,38.6163414868584,22.8179305262225,0.677689064138264,0,0,0,0,3.29560121570245,6.14749288514487,12.6501327016343,12.4205463265155,14.7227472945967,38.8485338789173,34.8972294703549,14.8213867050094,11.3097655801519,9.19218786610021,16.5173821499083,13.4071704989447,12.7493422602682,30.597618753405,29.916459457988,25.5247551572812,18.1468949350898,15.1945904708554,13.1406493088057,29.4628585473668,21.7828671622628,24.2319279572891,0.302904773332736,0,0.289864488701678,0,1.3599426674155,0,0,0.448026887097336,1.12355536105401,0,0,0,3.80277233397037,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0.867426633830679,1.52232739156071,0.230615497256059,0.452167921657868,0.823120949949934,0.251333182659351,0.247194967734374,0.144599356919912,0,0.970601099684455,0,0.969750506270444,0,6.14839673724249,10.0534419270458,0,0,0,0,5.09288173976397,4.11750542536764,16.5863744788981,3.82413504423008,4.09144731728529,9.76603809429932,7.78758062725237,0.407357455401265,0.248813941220186,0,0.210441855886474,2.21204753036596,4.36813998423599,2.34080768746954,2.26057226753573,3.19771546011241,3.71529788826064,5.71580519814346,0.776110112217047,1.5089759505299,2.08016688184601,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0.32833492815819,0.162137619091711,0.438599962275997,0.219550115291051,0.268412837520744,3.36463917702604,18.2141163911333,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0.444756087689741,0.570676878337677,0,0.329397909448022,0.251335208800269,0.397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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69638 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C7D8,uniprot:Q8K1D8 | |||
|association_with_transcript=68bp_to_NM_027147,uc008sjd.2_5end | |||
|cluster_id=chr4:41587211..41587266,- | |||
|description=CAGE_peak_3_at_Enho_5end | |||
|id=chr4:41587211..41587266,- | |||
|ontology_enrichment_celltype=CL:0000117!1.29e-16!23;CL:0000337!1.29e-16!23;CL:0000540!2.78e-14!33;CL:0000047!2.78e-14!33;CL:0000031!2.78e-14!33;CL:0000404!2.78e-14!33;CL:0000221!1.79e-13!44;CL:0000133!1.79e-13!44;CL:0002319!4.51e-13!43;CL:0000393!2.78e-10!39;CL:0000211!2.78e-10!39;CL:0000055!2.78e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-22,23;CL:0000337,1.26e-22,23;CL:0000540,5.12e-14,33;CL:0000047,5.12e-14,33;CL:0000031,5.12e-14,33;CL:0000404,5.12e-14,33;CL:0000221,1.34e-11,44;CL:0000133,1.34e-11,44;CL:0002319,4.18e-11,43;CL:0000393,2.30e-10,39;CL:0000211,2.30e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-27!73;UBERON:0005743!1.27e-27!73;UBERON:0000073!2.15e-26!75;UBERON:0001016!2.15e-26!75;UBERON:0004121!3.84e-26!102;UBERON:0000924!3.84e-26!102;UBERON:0006601!3.84e-26!102;UBERON:0000033!3.32e-24!63;UBERON:0001049!8.43e-24!52;UBERON:0005068!8.43e-24!52;UBERON:0006241!8.43e-24!52;UBERON:0007135!8.43e-24!52;UBERON:0002346!4.88e-23!71;UBERON:0003075!4.88e-23!71;UBERON:0007284!4.88e-23!71;UBERON:0000955!5.44e-22!50;UBERON:0006238!5.44e-22!50;UBERON:0002616!1.68e-21!49;UBERON:0002020!6.44e-20!34;UBERON:0003056!2.27e-19!49;UBERON:0003080!2.75e-17!40;UBERON:0002780!8.56e-17!39;UBERON:0001890!8.56e-17!39;UBERON:0006240!8.56e-17!39;UBERON:0002791!3.13e-16!29;UBERON:0003528!3.13e-16!29;UBERON:0001893!3.13e-16!29;UBERON:0007811!1.57e-11!86;UBERON:0000956!4.33e-11!21;UBERON:0001869!4.33e-11!21;UBERON:0000203!4.33e-11!21;UBERON:0000153!4.96e-11!94;UBERON:0002619!6.52e-09!17;UBERON:0003076!3.75e-07!12;UBERON:0003057!3.75e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.48e-31,54;UBERON:0001049,8.39e-29,52;UBERON:0005068,8.39e-29,52;UBERON:0006241,8.39e-29,52;UBERON:0007135,8.39e-29,52;UBERON:0001017,9.34e-29,73;UBERON:0002346,1.65e-28,64;UBERON:0003075,1.65e-28,64;UBERON:0007284,1.65e-28,64;UBERON:0001016,2.12e-27,75;UBERON:0002020,4.70e-26,34;UBERON:0004121,5.36e-25,95;UBERON:0000924,5.36e-25,95;UBERON:0006601,5.36e-25,95;UBERON:0010371,5.58e-25,73;UBERON:0000955,1.22e-23,47;UBERON:0006238,1.22e-23,47;UBERON:0003056,1.79e-23,49;UBERON:0002616,5.55e-23,46;UBERON:0003080,1.46e-21,40;UBERON:0003528,6.19e-21,29;UBERON:0002791,6.19e-21,29;UBERON:0001893,6.19e-21,29;UBERON:0002780,7.00e-21,39;UBERON:0001890,7.00e-21,39;UBERON:0006240,7.00e-21,39;UBERON:0010314,2.30e-16,92;UBERON:0000956,8.19e-14,21;UBERON:0001869,8.19e-14,21;UBERON:0000203,8.19e-14,21;UBERON:0002619,8.36e-11,17;UBERON:0002420,2.00e-08,8;UBERON:0007245,2.00e-08,8;UBERON:0010009,2.00e-08,8;UBERON:0010011,2.00e-08,8;UBERON:0000454,2.00e-08,8;UBERON:0002021,5.03e-08,10;UBERON:0000411,5.03e-08,10;UBERON:0001950,5.03e-08,10;UBERON:0003076,1.19e-07,12;UBERON:0003057,1.19e-07,12;UBERON:0002240,4.90e-07,6;UBERON:0005174,4.90e-07,6;UBERON:0001137,4.90e-07,6 | |||
|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0.496454756004426,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0.782391344348039,0.65407546914134,1.09843091367236,0.972149495371417,0.55994568650145,0,0,0,0,0.514518872071894,0,0,36.214646493868,38.6163414868584,22.8179305262225,0.677689064138264,0,0,0,0,3.29560121570245,6.14749288514487,12.6501327016343,12.4205463265155,14.7227472945967,38.8485338789173,34.8972294703549,14.8213867050094,11.3097655801519,9.19218786610021,16.5173821499083,13.4071704989447,12.7493422602682,30.597618753405,29.916459457988,25.5247551572812,18.1468949350898,15.1945904708554,13.1406493088057,29.4628585473668,21.7828671622628,24.2319279572891,0.302904773332736,0,0.289864488701678,0,1.3599426674155,0,0,0.448026887097336,1.12355536105401,0,0,0,3.80277233397037,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0.867426633830679,1.52232739156071,0.230615497256059,0.452167921657868,0.823120949949934,0.251333182659351,0.247194967734374,0.144599356919912,0,0.970601099684455,0,0.969750506270444,0,6.14839673724249,10.0534419270458,0,0,0,0,5.09288173976397,4.11750542536764,16.5863744788981,3.82413504423008,4.09144731728529,9.76603809429932,7.78758062725237,0.407357455401265,0.248813941220186,0,0.210441855886474,2.21204753036596,4.36813998423599,2.34080768746954,2.26057226753573,3.19771546011241,3.71529788826064,5.71580519814346,0.776110112217047,1.5089759505299,2.08016688184601,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0.32833492815819,0.162137619091711,0.438599962275997,0.219550115291051,0.268412837520744,3.36463917702604,18.2141163911333,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0.444756087689741,0.570676878337677,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,2.0863469104839,1.48523066392647,1.1270773567308,0.610953983535943,0.193952487167626,0.771494018793504,0.316182685621286,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,1.2731292589071,0.287696137450811,0.324270453550071,0,0,0.744281895337007,1.24815069245824,0.757736633841335,0.717589654087649,0,0,0.757965647081939,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.275936746304732,7.70642831941401,8.08760637486202,0,0.757412781613119,0.315508219416257,0.390438744296638,0,0.955875191810208,0.668396022247182,0.849229592366497,0.809621403349789,0.584511715822624,0.790575555893047,4.4984984299053,0,0,0.488660878060728,0,0,0.485561272309963,0.906970670894253,0.188605079755898,0,0,0,1.09060118843252,0,0,0,0,0,1.44048875225048,1.94038025674132,2.57204442037911,0.886701168211368,0.356737635204141,1.31639216481697,2.13125464380219,0,0.847328283455281,0.441056796109924,0.32977250588296,0.968786560175433,0.301564624640779,0.119372344003136,0.164140899745061,0,6.86073617438886,0,0.412773735926445,0,0,0,0.228778173206523,0,0.559805809294632,0,0,0.632671987162271,0.406638934253697,0.972048067396211,0.627264888043406,0.87345025498471,0.539457385539283,1.07449492442937,0.523511883968059,0,0,2.25477175473676,0.448549638131936,0.496375471371293,0,0.774958940866387,0.337912250981556,0.58678619322877,0.13020438484395,0.314578033277133,0,0.576060012515731,0,1.21635129174099,0.616265742988964,0.51968329191118,0.537080087002444,0,0,0,0,0.228620419965,0,0,0,0,0.680191150845634,0.221985953374065,0.269141569828427,0.167884616364078,0.965947970160952,0.187682475451182,0,0.214368379079066,0.501572104035363,6.21227026878773,5.9842280745933,6.87474616127276,5.499301834998,8.90607275701835,7.55393897389701,7.42524750254986,8.10578165803597,3.17199686288943,4.14208249401456,2.90604573235695,1.99512436700516,2.73173769206615,2.67417388775123,5.8691685535835,5.33146174505041,3.33370091702423,2.26638562962784,4.81378814387723,2.02157769411038,2.28131369901216,2.07488975524684,3.27745276144588,2.81710670581425,3.27382173046996,1.42888107384922,4.40360438590451,1.73618298417335,2.47251540481984,2.79677948255355,1.71434626192708,3.01708870470874,2.38436189947321,2.90692833264657,3.19971893412124,4.3153450024755,1.82927972872773,1.57841826862706,1.62964936615034,2.24456908663095,4.50813068871862,3.54616136552028,1.63692417267876,3.09873682371932,4.05103883060397,11.7410971630835,2.33931608445408,4.51229213501426,2.48674831689496,1.32354851471709,1.62307484934295 | |||
|short_description=p3@Enho | |||
}} |
Revision as of 11:11, 5 August 2015
Short description: | p3@Enho |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Enho_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 68bp_to_NM_027147, uc008sjd.2_5end |
EntrezGene: | 69638 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.26e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.26e-22 | 23 |
neuron | 5.12e-14 | 33 |
neuronal stem cell | 5.12e-14 | 33 |
neuroblast | 5.12e-14 | 33 |
electrically signaling cell | 5.12e-14 | 33 |
ectodermal cell | 1.34e-11 | 44 |
neurectodermal cell | 1.34e-11 | 44 |
neural cell | 4.18e-11 | 43 |
electrically responsive cell | 2.30e-10 | 39 |
electrically active cell | 2.30e-10 | 39 |