FFCP PHASE1:Hg19::chr8:21988837..21988848,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55806 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5172 | |||
|TSSclassifier=weak | |||
|UniProt=O43593 | |||
|association_with_transcript=-272bp_to_ENST00000312841,NM_005144,NM_018411,uc003xas.2,uc003xat.2,uc010lts.2_5end | |||
|description=CAGE_peak_6_at_HR_5end | |||
|id=chr8:21988837..21988848,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.10e-13;1!CL:0000333;5.29e-11;5!CL:0000159;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,9.73e-14,1;CL:0000159,1.64e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.08e-18;3 | |||
|ontology_enrichment_disease=DOID:0050687!4.99e-10!143;DOID:305!1.45e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.10e-13;1!DOID:5093;2.66e-13;4!DOID:1612;2.66e-13;4!DOID:169;2.55e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,9.73e-14,1;DOID:5093,2.51e-13,4;DOID:1612,2.51e-13,4;DOID:169,2.26e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.39e-09!173;UBERON:0006601!1.39e-09!173;UBERON:0004121!2.14e-08!169;UBERON:0000033!2.12e-07!123;UBERON:0000955!4.62e-07!69;UBERON:0006238!4.62e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;5.29e-11;5!UBERON:0002410;5.29e-11;5!UBERON:0002037;2.07e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.55e-11,5;UBERON:0002410,4.55e-11,5;UBERON:0002037,2.07e-09,6;UBERON:0006215,2.07e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0.900273288253207,0.206105058476878,0.515281080091258,0.18611685633159,0.168776332241266,0.194874010322397,1.00973509697646,0.184099797284599,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.473227200159376,1.01150814046861,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0.784885860501384,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0.205654985406647,1.20137223137567,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,0.103041011647722,0.366277859273374,0.577566499444116,0,0.650060246036521,0,0.386682873168488,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.330569830721956,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90012867315194,0,0,0,0.818149460017238,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,1.04171104434093,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0.583209226766509,0.173624994933292,0,0.120596438625408,0,2.76448149828062,2.95547618953547,0,0.10893846351899,0.278847488557207,0.0769502585037971,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,1.19472429772959,0,0,0,0.293977192243133,0.261177619741208,0,0,0.19351266257817,0.0730893170861856,0.328461828212837,0.0969890164884194,0,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.815425236441684,0.732219924186332,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.258565912723101,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.332787154610557,0.248385611765534,0.415045904808692,0.124980407962107,0,0.570930667089935,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0.797189041880179,0,0.655219697692825,1.2288645437686,0,0,0,0,0,0,0.139879507719444,0,1.53473245564382,3.98951802167723,0,0.982886743728125,0,0.425149840203366,0.495743057036009,0,0,0.315446980005013,0,0.352675943690684,0,0.128458450192919,0,0,0,0,0.276629009856872,0.161475645631851,0,0.88332946650923,0,0,0.577628330751691,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.317079050969534,0,0,0.496211178389294,0.527613733078862,0,0.535701835878287,0,0,0,0.0887023701626388,0,0.342976018874837,0.679697329768317,0.131545547125698,0,0.222462803784138,0,0,0,0,0,0,0.78624198594322,4.58239474024907,0,0.521574816907738,0.801711364730253,0.207216164163037,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,5.57062170451831,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631086248772738,0.407948941145488,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0.101988829741982,0,0.18378979906969,0,1.21245917149183,0.803892390468535,0,0.310298987585686,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@HR | |||
}} |
Revision as of 21:01, 22 January 2014
Short description: | p6@HR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HR_5end |
Coexpression cluster: | NA |
Association with transcript: | -272bp_to_ENST00000312841, NM_005144, NM_018411, uc003xas.2, uc003xat.2, uc010lts.2_5end |
EntrezGene: | HR |
HGNC: | 5172 |
UniProt: | O43593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 9.73e-14 | 1 |
seromucus secreting cell | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.55e-11 | 5 |
autonomic nervous system | 4.55e-11 | 5 |
cerebellum | 2.07e-09 | 6 |
rhombic lip | 2.07e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 9.73e-14 | 1 |
thoracic cancer | 2.51e-13 | 4 |
breast cancer | 2.51e-13 | 4 |
neuroendocrine tumor | 2.26e-09 | 6 |