FFCP PHASE1:Mm9::chr4:137549393..137549419,+: Difference between revisions
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{{FFCP|EntrezGene=230861|HGNC=|MCL_coexpression_id=1|UniProt=Q80XI3,E9QNX3|association_with_transcript=0bp_to_ENSMUST00000105831,ENSMUST00000105832,ENSMUST00000132194_5end|description=CAGE_peak_2_at_Eif4g3_5end|id=chr4:137549393..137549419,+|ontology_enrichment_celltype=CL:0000540!1.65e-09!33;CL:0000047!1.65e-09!33;CL:0000031!1.65e-09!33;CL:0000404!1.65e-09!33;CL:0000393!4.12e-07!39;CL:0000211!4.12e-07!39;CL:0000117!8.57e-07!23;CL:0000337!8.57e-07!23|ontology_enrichment_celltype_v019_2=CL:0000540,1.65e-09,33;CL:0000047,1.65e-09,33;CL:0000031,1.65e-09,33;CL:0000404,1.65e-09,33;CL:0000393,4.12e-07,39;CL:0000211,4.12e-07,39;CL:0000117,8.57e-07,23;CL:0000337,8.57e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!7.10e-19!102;UBERON:0000924!7.10e-19!102;UBERON:0006601!7.10e-19!102;UBERON:0001017!6.25e-18!73;UBERON:0005743!6.25e-18!73;UBERON:0000073!1.12e-16!75;UBERON:0001016!1.12e-16!75;UBERON:0002346!4.83e-16!71;UBERON:0003075!4.83e-16!71;UBERON:0007284!4.83e-16!71;UBERON:0001049!1.36e-14!52;UBERON:0005068!1.36e-14!52;UBERON:0006241!1.36e-14!52;UBERON:0007135!1.36e-14!52;UBERON:0000033!2.62e-14!63;UBERON:0000955!5.49e-14!50;UBERON:0006238!5.49e-14!50;UBERON:0002616!2.09e-13!49;UBERON:0002020!4.64e-11!34;UBERON:0003056!7.62e-11!49;UBERON:0000153!1.17e-10!94;UBERON:0003080!1.18e-10!40;UBERON:0002780!3.98e-10!39;UBERON:0001890!3.98e-10!39;UBERON:0006240!3.98e-10!39;UBERON:0000468!7.77e-10!333;UBERON:0007811!1.23e-09!86;UBERON:0000475!3.09e-09!200;UBERON:0002791!1.14e-08!29;UBERON:0003528!1.14e-08!29;UBERON:0001893!1.14e-08!29;UBERON:0000922!1.74e-08!328;UBERON:0002021!3.42e-08!10;UBERON:0000411!3.42e-08!10;UBERON:0001950!3.42e-08!10;UBERON:0004111!1.62e-07!122;UBERON:0000479!6.14e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.61e-18,95;UBERON:0000924,3.61e-18,95;UBERON:0006601,3.61e-18,95;UBERON:0001017,6.25e-18,73;UBERON:0001016,1.12e-16,75;UBERON:0010371,2.83e-16,73;UBERON:0000073,6.06e-16,54;UBERON:0002346,1.27e-15,64;UBERON:0003075,1.27e-15,64;UBERON:0007284,1.27e-15,64;UBERON:0001049,1.36e-14,52;UBERON:0005068,1.36e-14,52;UBERON:0006241,1.36e-14,52;UBERON:0007135,1.36e-14,52;UBERON:0000955,1.72e-12,47;UBERON:0006238,1.72e-12,47;UBERON:0010314,5.65e-12,92;UBERON:0002616,6.28e-12,46;UBERON:0002020,4.64e-11,34;UBERON:0003056,7.62e-11,49;UBERON:0003080,1.18e-10,40;UBERON:0002780,3.98e-10,39;UBERON:0001890,3.98e-10,39;UBERON:0006240,3.98e-10,39;UBERON:0003528,1.14e-08,29;UBERON:0002791,1.14e-08,29;UBERON:0001893,1.14e-08,29;UBERON:0002021,3.42e-08,10;UBERON:0000411,3.42e-08,10;UBERON:0001950,3.42e-08,10;UBERON:0004111,1.62e-07,122;UBERON:0000922,5.75e-07,320;UBERON:0000479,6.14e-07,349|phase1_expression=26.7448574665006,17.0997949743287,14.5599756604652,13.3084252975005,13.023288978605,19.1382369979554,17.9881733258555,18.593758575587,17.1762241025033,18.2570330531155,22.0871179010901,29.6752431462651,26.5361131393369,20.2815333612074,14.9899392817048,15.9955461237963,9.09430441566591,25.0792421459799,26.3259712523018,25.0389894560838,29.1698485218169,13.3049874609186,15.9331871374751,13.4393635146462,12.8469197397615,8.03924749761028,12.4920978886132,10.3426191689227,8.55105387553682,8.06496415231778,11.0865255327652,10.7955214488137,10.4561013889377,15.8481681015439,5.19932915552294,4.3221007793208,6.12508068787107,16.7412652294763,8.5946887897618,18.8468547830567,17.6469446409304,17.7591826089196,12.62326917881,10.1976422560218,9.83356232829291,6.9747765821439,32.8604364626176,10.6832326626419,12.7417985985994,14.1933826324227,11.3389001516544,4.31257693094915,15.268217151254,22.4862264023517,25.2070349356848,28.8130568360261,26.0745430344269,21.6582278756526,35.6076971112892,45.4932242173948,21.5502677192101,11.5207140903505,11.5608323494448,11.6986963246582,8.89979726310277,13.4991221839759,17.0772062995491,20.7477884873639,27.2703680371296,22.9510095163874,23.7667206327062,35.4207220660716,33.130281142742,24.3756690437759,22.715376631322,21.1420320920305,36.3382407297983,42.3921962442823,35.0222895824235,42.0717257859318,39.3396867490361,30.2129754922921,33.2227768811643,25.8870800614573,33.1572197675678,41.5426305517871,42.5691325589318,41.0078780815661,13.7821671866395,17.608173504881,35.6533321103064,18.0689014166091,7.47968467078526,17.810205324048,18.1937396885347,17.0250217096988,16.0106638950197,7.83979483859066,8.05336614268893,8.83348936275851,26.6194063377926,7.69958864485907,20.3844191765317,14.2213340630666,9.52560580449342,8.10751569520315,5.56076889516262,18.8403401536449,38.0638688961342,27.6102378660574,23.7674897669606,19.1813251336649,24.4452427091422,23.2112866451039,34.3359024836258,33.678646476353,28.9218112249217,16.4843266888699,7.07688441559899,24.103260642164,30.0344465106135,25.2135131630315,18.6391761218122,57.0922554172517,48.5916359807216,12.2619386500124,9.94465533399138,7.7987355029143,8.6407754409684,42.5405415909696,26.5350349634803,33.6753663662477,59.4479175057586,55.7459696980121,41.557608911912,35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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:230861 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80XI3,uniprot:E9QNX3 | |||
|association_with_transcript=0bp_to_ENSMUST00000105831,ENSMUST00000105832,ENSMUST00000132194_5end | |||
|cluster_id=chr4:137549393..137549419,+ | |||
|description=CAGE_peak_2_at_Eif4g3_5end | |||
|id=chr4:137549393..137549419,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.65e-09!33;CL:0000047!1.65e-09!33;CL:0000031!1.65e-09!33;CL:0000404!1.65e-09!33;CL:0000393!4.12e-07!39;CL:0000211!4.12e-07!39;CL:0000117!8.57e-07!23;CL:0000337!8.57e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.65e-09,33;CL:0000047,1.65e-09,33;CL:0000031,1.65e-09,33;CL:0000404,1.65e-09,33;CL:0000393,4.12e-07,39;CL:0000211,4.12e-07,39;CL:0000117,8.57e-07,23;CL:0000337,8.57e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.10e-19!102;UBERON:0000924!7.10e-19!102;UBERON:0006601!7.10e-19!102;UBERON:0001017!6.25e-18!73;UBERON:0005743!6.25e-18!73;UBERON:0000073!1.12e-16!75;UBERON:0001016!1.12e-16!75;UBERON:0002346!4.83e-16!71;UBERON:0003075!4.83e-16!71;UBERON:0007284!4.83e-16!71;UBERON:0001049!1.36e-14!52;UBERON:0005068!1.36e-14!52;UBERON:0006241!1.36e-14!52;UBERON:0007135!1.36e-14!52;UBERON:0000033!2.62e-14!63;UBERON:0000955!5.49e-14!50;UBERON:0006238!5.49e-14!50;UBERON:0002616!2.09e-13!49;UBERON:0002020!4.64e-11!34;UBERON:0003056!7.62e-11!49;UBERON:0000153!1.17e-10!94;UBERON:0003080!1.18e-10!40;UBERON:0002780!3.98e-10!39;UBERON:0001890!3.98e-10!39;UBERON:0006240!3.98e-10!39;UBERON:0000468!7.77e-10!333;UBERON:0007811!1.23e-09!86;UBERON:0000475!3.09e-09!200;UBERON:0002791!1.14e-08!29;UBERON:0003528!1.14e-08!29;UBERON:0001893!1.14e-08!29;UBERON:0000922!1.74e-08!328;UBERON:0002021!3.42e-08!10;UBERON:0000411!3.42e-08!10;UBERON:0001950!3.42e-08!10;UBERON:0004111!1.62e-07!122;UBERON:0000479!6.14e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.61e-18,95;UBERON:0000924,3.61e-18,95;UBERON:0006601,3.61e-18,95;UBERON:0001017,6.25e-18,73;UBERON:0001016,1.12e-16,75;UBERON:0010371,2.83e-16,73;UBERON:0000073,6.06e-16,54;UBERON:0002346,1.27e-15,64;UBERON:0003075,1.27e-15,64;UBERON:0007284,1.27e-15,64;UBERON:0001049,1.36e-14,52;UBERON:0005068,1.36e-14,52;UBERON:0006241,1.36e-14,52;UBERON:0007135,1.36e-14,52;UBERON:0000955,1.72e-12,47;UBERON:0006238,1.72e-12,47;UBERON:0010314,5.65e-12,92;UBERON:0002616,6.28e-12,46;UBERON:0002020,4.64e-11,34;UBERON:0003056,7.62e-11,49;UBERON:0003080,1.18e-10,40;UBERON:0002780,3.98e-10,39;UBERON:0001890,3.98e-10,39;UBERON:0006240,3.98e-10,39;UBERON:0003528,1.14e-08,29;UBERON:0002791,1.14e-08,29;UBERON:0001893,1.14e-08,29;UBERON:0002021,3.42e-08,10;UBERON:0000411,3.42e-08,10;UBERON:0001950,3.42e-08,10;UBERON:0004111,1.62e-07,122;UBERON:0000922,5.75e-07,320;UBERON:0000479,6.14e-07,349 | |||
|phase1_expression=26.7448574665006,17.0997949743287,14.5599756604652,13.3084252975005,13.023288978605,19.1382369979554,17.9881733258555,18.593758575587,17.1762241025033,18.2570330531155,22.0871179010901,29.6752431462651,26.5361131393369,20.2815333612074,14.9899392817048,15.9955461237963,9.09430441566591,25.0792421459799,26.3259712523018,25.0389894560838,29.1698485218169,13.3049874609186,15.9331871374751,13.4393635146462,12.8469197397615,8.03924749761028,12.4920978886132,10.3426191689227,8.55105387553682,8.06496415231778,11.0865255327652,10.7955214488137,10.4561013889377,15.8481681015439,5.19932915552294,4.3221007793208,6.12508068787107,16.7412652294763,8.5946887897618,18.8468547830567,17.6469446409304,17.7591826089196,12.62326917881,10.1976422560218,9.83356232829291,6.9747765821439,32.8604364626176,10.6832326626419,12.7417985985994,14.1933826324227,11.3389001516544,4.31257693094915,15.268217151254,22.4862264023517,25.2070349356848,28.8130568360261,26.0745430344269,21.6582278756526,35.6076971112892,45.4932242173948,21.5502677192101,11.5207140903505,11.5608323494448,11.6986963246582,8.89979726310277,13.4991221839759,17.0772062995491,20.7477884873639,27.2703680371296,22.9510095163874,23.7667206327062,35.4207220660716,33.130281142742,24.3756690437759,22.715376631322,21.1420320920305,36.3382407297983,42.3921962442823,35.0222895824235,42.0717257859318,39.3396867490361,30.2129754922921,33.2227768811643,25.8870800614573,33.1572197675678,41.5426305517871,42.5691325589318,41.0078780815661,13.7821671866395,17.608173504881,35.6533321103064,18.0689014166091,7.47968467078526,17.810205324048,18.1937396885347,17.0250217096988,16.0106638950197,7.83979483859066,8.05336614268893,8.83348936275851,26.6194063377926,7.69958864485907,20.3844191765317,14.2213340630666,9.52560580449342,8.10751569520315,5.56076889516262,18.8403401536449,38.0638688961342,27.6102378660574,23.7674897669606,19.1813251336649,24.4452427091422,23.2112866451039,34.3359024836258,33.678646476353,28.9218112249217,16.4843266888699,7.07688441559899,24.103260642164,30.0344465106135,25.2135131630315,18.6391761218122,57.0922554172517,48.5916359807216,12.2619386500124,9.94465533399138,7.7987355029143,8.6407754409684,42.5405415909696,26.5350349634803,33.6753663662477,59.4479175057586,55.7459696980121,41.557608911912,35.8553191379744,20.5715514977639,22.8908825922571,20.975988949995,27.5678831211281,27.8457747940186,16.3230494147766,24.1283253939168,23.2085419467001,26.3301251715639,28.8255870640912,25.4868690802462,32.0792179716379,25.4370231660754,35.9301552318857,29.9116911078713,19.2892244536266,28.6388666702366,22.6363908239408,22.8418171412817,24.8792833523116,7.02213187313235,3.60287069960601,7.38825098428541,22.7838349789052,25.3288144779584,19.2666405763286,24.8581972364471,22.6278866509514,20.3632589011339,21.1605889722871,15.8281306825775,15.5297905348335,17.6079039407424,23.8042822914688,21.3210969105601,17.6901984784652,15.1489579550825,17.5810408576087,44.3711791470309,36.7369466194045,12.8863325363681,17.982638533121,24.7414370620871,31.1197140292988,30.7993232559803,19.5633018884642,22.6825604721768,15.0278244628922,11.8632265386128,11.1995289212327,17.0907941984183,16.7123436514567,19.1064805376738,17.9763881730844,15.9942156907274,10.9527700289902,18.587454293402,28.5621281524322,32.6852433451933,28.1038832426534,25.6017283061266,28.3348712356887,33.8947838986019,33.3598934433901,25.2767951824613,25.7900072596563,8.00422093135302,20.8556382145118,19.8524585064335,19.3381416650974,14.2002084971952,13.2647437863829,11.2035374783825,14.3848068725405,26.9144476446559,18.9447375099776,57.5072826109418,27.1662891798007,20.2824487524464,18.9434158460334,20.6307025550199,13.0259750768109,25.4959402429914,23.6864264713106,27.3781160422603,24.4432923516271,27.4587590497547,28.141051250225,18.091316707337,34.5386556708304,26.9556096421587,33.8840975162626,44.1689709181239,26.3819936692338,30.9106117539953,30.810249477862,22.6186925908908,13.5976420954677,30.4893849271802,28.6974216156922,29.8624097377293,33.2881189921857,10.9836413402373,21.7124997395761,29.3422644057119,27.3307121007647,32.5289330576526,29.6321309461165,32.3058077419471,40.479943902803,30.765613327292,28.0565623594859,34.7853244592941,47.5555548304274,32.5042795126935,22.2582004584069,21.8268525533792,36.7883374228754,19.9117707509944,19.1796702562435,14.511530734308,14.8998013007159,15.0603965369194,19.0609791725235,17.3146956422708,21.0849563096953,18.8943610543902,24.018793603122,28.4630243152497,25.7838858120467,35.0652793926402,26.10885863454,23.8019978160268,23.7914108885067,36.8867685975929,32.4631248035768,26.1632942757372,16.745572201303,26.0485595950719,16.9465656691056,37.4898276693435,34.4612268647693,19.0528023501169,28.2867617913051,19.8158091045207,23.8004304630339,17.1973693611612,28.1846459055975,18.7957968877638,25.5919716274396,22.9641213938442,16.1996873024034,20.5041341581538,17.8446975101088,10.7086410896129,11.47601909054,12.5761976162026,13.3653886522116,29.577415399836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| |||
|short_description=p2@Eif4g3 | |||
}} |
Revision as of 00:38, 5 August 2015
Short description: | p2@Eif4g3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Eif4g3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000105831, ENSMUST00000105832, ENSMUST00000132194_5end |
EntrezGene: | 230861 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.65e-09 | 33 |
neuronal stem cell | 1.65e-09 | 33 |
neuroblast | 1.65e-09 | 33 |
electrically signaling cell | 1.65e-09 | 33 |
electrically responsive cell | 4.12e-07 | 39 |
electrically active cell | 4.12e-07 | 39 |
CNS neuron (sensu Vertebrata) | 8.57e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.57e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.61e-18 | 95 |
ectoderm | 3.61e-18 | 95 |
presumptive ectoderm | 3.61e-18 | 95 |
central nervous system | 6.25e-18 | 73 |
nervous system | 1.12e-16 | 75 |
ecto-epithelium | 2.83e-16 | 73 |
regional part of nervous system | 6.06e-16 | 54 |
neurectoderm | 1.27e-15 | 64 |
neural plate | 1.27e-15 | 64 |
presumptive neural plate | 1.27e-15 | 64 |
neural tube | 1.36e-14 | 52 |
neural rod | 1.36e-14 | 52 |
future spinal cord | 1.36e-14 | 52 |
neural keel | 1.36e-14 | 52 |
brain | 1.72e-12 | 47 |
future brain | 1.72e-12 | 47 |
structure with developmental contribution from neural crest | 5.65e-12 | 92 |
regional part of brain | 6.28e-12 | 46 |
gray matter | 4.64e-11 | 34 |
pre-chordal neural plate | 7.62e-11 | 49 |
anterior neural tube | 1.18e-10 | 40 |
regional part of forebrain | 3.98e-10 | 39 |
forebrain | 3.98e-10 | 39 |
future forebrain | 3.98e-10 | 39 |
brain grey matter | 1.14e-08 | 29 |
regional part of telencephalon | 1.14e-08 | 29 |
telencephalon | 1.14e-08 | 29 |
occipital lobe | 3.42e-08 | 10 |
visual cortex | 3.42e-08 | 10 |
neocortex | 3.42e-08 | 10 |
anatomical conduit | 1.62e-07 | 122 |
embryo | 5.75e-07 | 320 |
tissue | 6.14e-07 | 349 |