FFCP PHASE1:Hg19::chr8:125577064..125577081,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20443 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENST00000522722_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_5_at_MTSS1_5end | |||
|id=chr8:125577064..125577081,- | |||
|ontology_enrichment_celltype=CL:0000542!1.69e-33!53;CL:0000051!1.69e-33!53;CL:0000838!1.46e-32!52;CL:0000084!2.86e-25!25;CL:0000827!2.86e-25!25;CL:0000791!7.22e-24!18;CL:0000789!7.22e-24!18;CL:0002420!7.22e-24!18;CL:0002419!7.22e-24!18;CL:0000790!7.22e-24!18;CL:0000738!7.29e-17!140;CL:0000625!2.39e-15!11;CL:0002087!2.89e-14!119;CL:0000037!3.13e-14!172;CL:0000566!3.13e-14!172;CL:0000988!5.64e-13!182;CL:0002032!1.20e-12!165;CL:0000837!1.20e-12!165;CL:0000236!5.53e-12!14;CL:0002031!2.82e-11!124;CL:0000624!2.96e-09!6;CL:0000945!1.00e-07!24;CL:0000826!1.00e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.01e-40;18!CL:0000789;3.01e-40;18!CL:0002419;3.01e-40;18!CL:0000084;1.50e-34;25!CL:0000542;1.85e-30;53!CL:0000625;3.56e-28;11!CL:0000236;1.01e-20;13!CL:0000624;2.58e-16;6!CL:0000945;5.00e-12;24!CL:0000898;2.98e-09;3!CL:0000623;2.10e-08;3!CL:0000767;2.33e-07;3!CL:0002087;3.04e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.05e-49,52;CL:0000542,1.04e-47,53;CL:0000051,1.04e-47,53;CL:0000791,2.64e-40,18;CL:0000789,2.64e-40,18;CL:0002420,2.64e-40,18;CL:0002419,2.64e-40,18;CL:0000790,2.64e-40,18;CL:0000084,1.52e-34,25;CL:0000827,1.52e-34,25;CL:0000625,3.66e-28,11;CL:0002087,7.28e-22,115;CL:0000738,1.03e-21,136;CL:0000236,4.37e-19,14;CL:0002031,6.53e-18,120;CL:0000037,1.64e-17,168;CL:0000624,2.18e-16,6;CL:0000988,4.73e-16,177;CL:0002032,1.62e-15,161;CL:0000837,1.62e-15,161;CL:0000945,5.26e-12,24;CL:0000826,5.26e-12,24;CL:0000898,2.82e-09,3;CL:0000623,2.61e-08,3;CL:0000825,2.61e-08,3;CL:0000767,1.54e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.01e-40;18!CL:0000051;1.85e-30;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.71e-11!15;UBERON:0000179!1.71e-11!15;UBERON:0000463!1.71e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-18;15!UBERON:0000179;1.15e-18;15!UBERON:0000463;1.15e-18;15!UBERON:0002390;3.80e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-18,15;UBERON:0000179,1.10e-18,15;UBERON:0000463,1.10e-18,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.91914699048606,1.70297735647684,0,0,0,1.08454080812422,0,0,2.76997704265939,3.20871115952227,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,2.73069305631066,5.33705552318133,2.13365111283254,2.80277190925209,3.4485146397269,3.96626923670917,3.81621501814146,5.12291672198504,4.11066032559657,5.73409842187843,0,1.12101712596307,0.263384084775077,1.57367816091066,18.0784950864616,14.1865034309661,10.8671222003941,11.0813570655421,11.3627473376336,5.84480185223734,13.5920757399912,7.9543595018206,11.9628303075155,5.1452734115353,8.06975314271754,2.73124629875744,8.71520894399483,3.03985019564433,17.9677913155733,14.0872235003957,16.0524496853828,6.27213142829861,27.1942422474159,23.7596706033191,24.3975486292667,7.33757106856558,15.2911398875566,7.81300144627702,7.60361635558699,11.293133930833,11.1348351704344,18.7396089828519,15.6272986349051,6.56902397536837,6.8546292696409,7.75576567772171,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0.33472061276467,1.61131726843659,0.760272105718513,0.24406205754817,0.367663080345869,0,0,0,0.337834441449967,0,0,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,7.29013812747131,9.9188684435378,1.15508732651774,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,7.44364894042395,0.862856803274467,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,7.61171413848254,4.58782324285425,5.69647187174163,3.57347663186684,3.70226045777575,5.83625980073446,10.2605973075242,7.9312517629427,0,0,0,0.929015875628594,0,2.20539714380084,0.478278818186467,0,0.191505370132367,2.32840940996271,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,1.17232857241224,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,4.97311047956066,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,5.10966490978682,0.941881538370149,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,1.45963831372533,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.78602152549833,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0.351742488719241,0,0,0,0,0,0.0887023701626388,0.921871900446234,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0.563903507879121,1.09578409555081,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.426467963801962,0.476128862927481,5.68382406556854,1.1794195716213,0,0.0636471582781649,0.202117188958219,0.870866991587845,0.342233301085281,1.95320953742304,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,1.20764276154616,0 | |||
|short_description=p5@MTSS1 | |||
}} |
Revision as of 23:39, 22 January 2014
Short description: | p5@MTSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MTSS1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -21bp_to_ENST00000522722_5end |
EntrezGene: | MTSS1 |
HGNC: | 20443 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.05e-49 | 52 |
lymphocyte | 1.04e-47 | 53 |
common lymphoid progenitor | 1.04e-47 | 53 |
mature alpha-beta T cell | 2.64e-40 | 18 |
alpha-beta T cell | 2.64e-40 | 18 |
immature T cell | 2.64e-40 | 18 |
mature T cell | 2.64e-40 | 18 |
immature alpha-beta T cell | 2.64e-40 | 18 |
T cell | 1.52e-34 | 25 |
pro-T cell | 1.52e-34 | 25 |
CD8-positive, alpha-beta T cell | 3.66e-28 | 11 |
nongranular leukocyte | 7.28e-22 | 115 |
leukocyte | 1.03e-21 | 136 |
B cell | 4.37e-19 | 14 |
hematopoietic lineage restricted progenitor cell | 6.53e-18 | 120 |
hematopoietic stem cell | 1.64e-17 | 168 |
CD4-positive, alpha-beta T cell | 2.18e-16 | 6 |
hematopoietic cell | 4.73e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.62e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-15 | 161 |
lymphocyte of B lineage | 5.26e-12 | 24 |
pro-B cell | 5.26e-12 | 24 |
naive T cell | 2.82e-09 | 3 |
natural killer cell | 2.61e-08 | 3 |
pro-NK cell | 2.61e-08 | 3 |
basophil | 1.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-18 | 15 |
haemolymphatic fluid | 1.10e-18 | 15 |
organism substance | 1.10e-18 | 15 |