FFCP PHASE1:Hg19::chr8:116681108..116681120,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJ97 | |||
|association_with_transcript=9bp_to_ENST00000519674_5end | |||
|description=CAGE_peak_9_at_TRPS1_5end | |||
|id=chr8:116681108..116681120,- | |||
|ontology_enrichment_celltype=CL:0002057!9.50e-22!42;CL:0000860!1.56e-18!45;CL:0000557!1.89e-18!71;CL:0000839!3.97e-17!70;CL:0000766!1.34e-15!76;CL:0002009!2.24e-15!65;CL:0002194!2.19e-14!63;CL:0000576!2.19e-14!63;CL:0000040!2.19e-14!63;CL:0000559!2.19e-14!63;CL:0000763!2.79e-12!112;CL:0000049!2.79e-12!112;CL:0002031!2.69e-11!124;CL:0000738!1.40e-10!140;CL:0002087!2.22e-09!119;CL:0002032!5.80e-09!165;CL:0000837!5.80e-09!165;CL:0000988!6.28e-09!182;CL:0000037!6.57e-09!172;CL:0000566!6.57e-09!172;CL:0000134!1.08e-07!358;CL:0002320!3.46e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-33;33!CL:0002057;2.63e-33;33!CL:0000473;1.85e-23;39!CL:0000234;1.85e-23;39!CL:0000576;3.50e-20;48!CL:0000766;6.88e-15;69!CL:0000763;1.04e-08;100!CL:0002494;1.06e-07;16!CL:0002087;3.51e-07;104!CL:0000097;5.49e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.02e-35,42;CL:0002057,6.02e-35,42;CL:0000557,2.65e-32,67;CL:0000473,2.31e-30,48;CL:0000234,2.31e-30,48;CL:0000839,1.37e-29,66;CL:0000766,1.74e-28,72;CL:0002009,1.04e-26,61;CL:0002194,6.67e-25,59;CL:0000576,6.67e-25,59;CL:0000040,6.67e-25,59;CL:0000559,6.67e-25,59;CL:0000763,1.09e-24,108;CL:0000049,1.09e-24,108;CL:0002031,1.86e-20,120;CL:0000738,4.21e-19,136;CL:0000988,9.22e-19,177;CL:0002032,1.20e-18,161;CL:0000837,1.20e-18,161;CL:0000037,1.71e-18,168;CL:0002087,4.46e-16,115;CL:0000134,2.19e-12,354;CL:0002320,1.44e-11,361;CL:0000048,1.47e-10,427;CL:0000723,5.70e-10,433;CL:0000219,1.33e-09,386;CL:0000034,1.42e-09,441;CL:0002494,1.62e-07,16;CL:0000097,4.23e-07,5;CL:0002028,4.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-25;42!CL:0000049;2.43e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-14!80;UBERON:0001474!3.31e-13!86;UBERON:0002390!3.70e-13!102;UBERON:0003061!3.70e-13!102;UBERON:0004765!6.78e-11!101;UBERON:0001434!6.78e-11!101;UBERON:0002193!1.65e-10!112;UBERON:0003081!8.36e-10!216;UBERON:0002204!1.12e-09!167;UBERON:0007100!8.36e-08!27;UBERON:0002405!2.49e-07!115;UBERON:0002384!4.01e-07!375;UBERON:0000948!8.44e-07!24;UBERON:0005498!8.44e-07!24;UBERON:0004140!8.44e-07!24;UBERON:0009881!8.44e-07!24;UBERON:0004141!8.44e-07!24;UBERON:0003084!8.44e-07!24;UBERON:0007005!8.44e-07!24;UBERON:0004139!8.44e-07!24;UBERON:0004291!8.44e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.95e-10;25!UBERON:0000948;1.59e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.16e-26,76;UBERON:0001474,3.35e-23,82;UBERON:0002390,6.95e-22,98;UBERON:0003061,6.95e-22,98;UBERON:0004765,1.20e-19,90;UBERON:0002405,2.02e-19,93;UBERON:0003081,2.74e-19,203;UBERON:0002193,4.59e-19,108;UBERON:0001434,7.40e-17,100;UBERON:0000926,5.93e-13,315;UBERON:0004120,5.93e-13,315;UBERON:0006603,5.93e-13,315;UBERON:0002204,2.26e-12,167;UBERON:0002384,6.14e-11,371;UBERON:0007100,3.22e-10,27;UBERON:0000948,1.57e-08,24;UBERON:0005498,1.57e-08,24;UBERON:0004140,1.57e-08,24;UBERON:0009881,1.57e-08,24;UBERON:0004141,1.57e-08,24;UBERON:0003084,1.57e-08,24;UBERON:0007005,1.57e-08,24;UBERON:0004139,1.57e-08,24;UBERON:0004291,1.57e-08,24 | |||
|phase1_expression=0.363356758541113,0.214100523890983,1.12763523276777,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0.791300934685361,0,0,0,0,0,1.46379839637152,0,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,1.96682138424452,1.53531759238885,1.23852898652861,0,0.30120591877825,0,0.0774672005803016,0,0,2.76997704265939,2.4065333696417,3.68918480216948,0.223915474239924,0.32389366601898,1.28787783817093,5.08893835728477,3.77875943688809,3.88134497900506,3.25400651667958,2.05583944010913,4.33588919253145,7.76769459269806,6.40401766322752,6.3850202069918,7.58440497620561,4.51839278508678,2.70852973188684,4.51781614902251,3.0019676506363,2.69668181334102,6.12167784741805,3.53021929783703,3.19668562899521,6.26717470354761,5.18605509816243,6.81959600852311,3.48251086354301,3.40431134814684,2.4912889959823,9.54744927975624,6.77927793946262,6.29847649644838,2.42159801053347,3.68277635987565,1.58231193720442,0.845021145247767,0.425208599930087,0.419317291016752,1.01095768031846,1.35159203557356,1.28580469357664,1.14005097496499,1.19350006319454,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,1.14681968437569,0,1.12101712596307,0,1.96709770113833,3.53709686474248,3.90642848099067,0,1.30368906653436,0.473447805734733,0,0.111410456885174,1.76763544484902,0.886135578334485,2.16643091012012,0.384273959177026,0.260118695119756,0.164437904603676,1.10540007114339,0.289803085735052,0.741432815810302,0.535081656179426,0,0,0.766440987203842,0.68725489096526,2.27717722817553,0.318565414324097,0,0,0.752875595388864,0.127986611154418,0,0.473554504088034,0,1.00803371612366,2.94184215361858,2.46201486600758,29.2568239576754,4.69490601792545,1.2786256184353,1.0843174571537,0,0.724232594804119,0.795285947051099,1.45990461090791,0.189069634328136,0,0.263504357079378,0.261958150995425,0,0,0,0.174129737299267,1.06366368415092,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,1.98788780678127,0.886413581652058,1.05927344650575,3.15520282823695,4.25602058638028,2.24271040056923,1.06748995729705,2.4666754841716,3.11211035399766,1.21239604862719,2.28846664358842,0.454072282934794,0.576175924479999,0,0,0,0,0.23486899728753,0.161872944368132,0,0.204154171254893,0.245668634623536,0.309977343527296,1.18800285728205,0.494533858557114,0,1.43723628363248,0.336672227908132,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0.794025282120147,1.07633781413317,0.427114777637135,0.423863802319124,1.50045548042201,0.618315175430633,0.772921620136887,0.18611685633159,2.36286865137773,0.974370051611986,3.78650661366172,0.460249493211497,0,1.06502877754984,1.0075209822764,1.18692414617341,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0,0.878002283269004,0,0,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0,1.58040879591855,0.858486162094873,0.246217006087397,0.234004265139238,0.297262324577456,0,0.335964256397719,0,0.268675568108545,0.290633938513962,0,6.40462209264727,1.67292024625129,3.10992173311158,10.0883967391873,7.06957627187728,0,0,0,0,0,0,0,0,0,0.07333828582095,0.904902010304444,0,0,0,0,0.257207374262142,0,0,2.57360388584666,0,0.823240336780769,0,1.06617584622764,0,1.80863626235752,1.74306691720059,3.499054691372,0,1.50677127429638,0,0.479249710983165,0,0,0,0.61642896765115,0.179060963239896,0,0.985153801009636,3.23441362289276,2.31017465303547,0.254094624222463,0,0,0,0.637938751653163,0,0,0.414415513436035,0.858840442033979,0,0.271265023699736,0.831883446123229,1.60586089917446,0.788512075169673,0.35142424497814,0,0,0,0,0.368738337083406,0.521301686808497,0,0.343143423810856,0.82707210449155,1.94142780736755,2.02782359826544,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,1.28139149255701,0,1.60853921143608,0,0.616838775210622,0.355123450626254,0.246381468041427,0,0.116210378459959,0,1.40354529212299,0.0920809889358963,0.34444334449382,0.910455840033585,0.393373244878272,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0.219259876645935,1.0457418040996,0.256450125116389,0.328014645699706,0.650756789328606,0.412164046590889,0.915694648183434,0.495056999523528,0.574265537996172,0.650060246036521,3.21367859688319,0.580024309752732,0,0,0.413509717453592,0.429680979473094,0.290033387828457,0.596586391912706,0.267096106940212,0,0.384380134730212,0.127612712494584,0.2023155617111,0.929691098594572,1.25924938732256,0.6970372701606,1.54016790088044,0,0,0.37064843820784,1.43124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0.855877976067841,1.59101623962968,0,0.539617372749944,0,0.235624804691373,0.404364963146632,0,0,0,1.70599442741899,2.11300293513511,0.545999645631943,1.83827061539827,2.26016233240486,0,1.99031692572366,0.876901770507525,0,0,0.405820753925408,0,0.281695602532241,0.28682270440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| |||
|short_description=p9@TRPS1 | |||
}} |
Revision as of 23:26, 22 January 2014
Short description: | p9@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TRPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000519674_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | E5RJ97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.02e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.02e-35 | 42 |
granulocyte monocyte progenitor cell | 2.65e-32 | 67 |
defensive cell | 2.31e-30 | 48 |
phagocyte | 2.31e-30 | 48 |
myeloid lineage restricted progenitor cell | 1.37e-29 | 66 |
myeloid leukocyte | 1.74e-28 | 72 |
macrophage dendritic cell progenitor | 1.04e-26 | 61 |
monopoietic cell | 6.67e-25 | 59 |
monocyte | 6.67e-25 | 59 |
monoblast | 6.67e-25 | 59 |
promonocyte | 6.67e-25 | 59 |
myeloid cell | 1.09e-24 | 108 |
common myeloid progenitor | 1.09e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 1.86e-20 | 120 |
leukocyte | 4.21e-19 | 136 |
hematopoietic cell | 9.22e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.20e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-18 | 161 |
hematopoietic stem cell | 1.71e-18 | 168 |
nongranular leukocyte | 4.46e-16 | 115 |
mesenchymal cell | 2.19e-12 | 354 |
connective tissue cell | 1.44e-11 | 361 |
multi fate stem cell | 1.47e-10 | 427 |
somatic stem cell | 5.70e-10 | 433 |
motile cell | 1.33e-09 | 386 |
stem cell | 1.42e-09 | 441 |
cardiocyte | 1.62e-07 | 16 |
mast cell | 4.23e-07 | 5 |
basophil mast progenitor cell | 4.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.16e-26 | 76 |
bone element | 3.35e-23 | 82 |
hematopoietic system | 6.95e-22 | 98 |
blood island | 6.95e-22 | 98 |
skeletal element | 1.20e-19 | 90 |
immune system | 2.02e-19 | 93 |
lateral plate mesoderm | 2.74e-19 | 203 |
hemolymphoid system | 4.59e-19 | 108 |
skeletal system | 7.40e-17 | 100 |
mesoderm | 5.93e-13 | 315 |
mesoderm-derived structure | 5.93e-13 | 315 |
presumptive mesoderm | 5.93e-13 | 315 |
musculoskeletal system | 2.26e-12 | 167 |
connective tissue | 6.14e-11 | 371 |
primary circulatory organ | 3.22e-10 | 27 |
heart | 1.57e-08 | 24 |
primitive heart tube | 1.57e-08 | 24 |
primary heart field | 1.57e-08 | 24 |
anterior lateral plate mesoderm | 1.57e-08 | 24 |
heart tube | 1.57e-08 | 24 |
heart primordium | 1.57e-08 | 24 |
cardiac mesoderm | 1.57e-08 | 24 |
cardiogenic plate | 1.57e-08 | 24 |
heart rudiment | 1.57e-08 | 24 |