FFCP PHASE1:Hg19::chr7:98479316..98479330,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100500819 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=38956 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=43bp_to_NR_037403_5end | |||
|coexpression_cluster_id=C673 | |||
|description=CAGE_peak_1_at_MIR3609_5end | |||
|id=chr7:98479316..98479330,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.00e-15!115;UBERON:0001049!2.06e-11!57;UBERON:0005068!2.06e-11!57;UBERON:0006241!2.06e-11!57;UBERON:0007135!2.06e-11!57;UBERON:0003080!8.34e-09!42;UBERON:0002780!1.62e-08!41;UBERON:0001890!1.62e-08!41;UBERON:0006240!1.62e-08!41;UBERON:0002616!6.82e-08!59;UBERON:0002020!3.35e-07!34;UBERON:0003528!3.35e-07!34;UBERON:0000955!9.57e-07!69;UBERON:0006238!9.57e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.01e-07;41!UBERON:0001890;4.01e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.36e-14,114;UBERON:0001049,3.54e-11,56;UBERON:0005068,3.54e-11,56;UBERON:0006241,3.54e-11,56;UBERON:0007135,3.54e-11,56;UBERON:0000073,5.03e-10,53;UBERON:0002616,5.03e-10,53;UBERON:0002780,8.31e-09,41;UBERON:0001890,8.31e-09,41;UBERON:0003080,8.31e-09,41;UBERON:0006240,8.31e-09,41;UBERON:0002346,4.37e-08,86;UBERON:0003528,1.93e-07,34;UBERON:0002020,1.93e-07,34;UBERON:0003075,4.82e-07,82;UBERON:0007284,4.82e-07,82;UBERON:0002791,8.57e-07,32 | |||
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| |||
|short_description=p1@MIR3609 | |||
}} |
Revision as of 18:08, 22 January 2014
Short description: | p1@MIR3609 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR3609_5end |
Coexpression cluster: | C673_CD4_Neutrophils_blood_CD8_skeletal_parietal_temporal |
Association with transcript: | 43bp_to_NR_037403_5end |
EntrezGene: | MIR3609 |
HGNC: | 38956 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.36e-14 | 114 |
neural tube | 3.54e-11 | 56 |
neural rod | 3.54e-11 | 56 |
future spinal cord | 3.54e-11 | 56 |
neural keel | 3.54e-11 | 56 |
regional part of nervous system | 5.03e-10 | 53 |
regional part of brain | 5.03e-10 | 53 |
regional part of forebrain | 8.31e-09 | 41 |
forebrain | 8.31e-09 | 41 |
anterior neural tube | 8.31e-09 | 41 |
future forebrain | 8.31e-09 | 41 |
neurectoderm | 4.37e-08 | 86 |
brain grey matter | 1.93e-07 | 34 |
gray matter | 1.93e-07 | 34 |
neural plate | 4.82e-07 | 82 |
presumptive neural plate | 4.82e-07 | 82 |
regional part of telencephalon | 8.57e-07 | 32 |