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FFCP PHASE1:Mm9::chr3:53960074..53960100,+: Difference between revisions

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{{FFCP|EntrezGene=22066|HGNC=|MCL_coexpression_id=2|UniProt=Q9QUQ5|association_with_transcript=40bp_to_ENSMUST00000029311_5end|description=CAGE_peak_2_at_Trpc4_5end|id=chr3:53960074..53960100,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,2.91e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.44e-14!50;UBERON:0006238!1.44e-14!50;UBERON:0002616!7.49e-14!49;UBERON:0001049!2.16e-12!52;UBERON:0005068!2.16e-12!52;UBERON:0006241!2.16e-12!52;UBERON:0007135!2.16e-12!52;UBERON:0003080!2.81e-12!40;UBERON:0000033!4.00e-12!63;UBERON:0003056!9.87e-12!49;UBERON:0002780!1.09e-11!39;UBERON:0001890!1.09e-11!39;UBERON:0006240!1.09e-11!39;UBERON:0002021!7.09e-10!10;UBERON:0000411!7.09e-10!10;UBERON:0001950!7.09e-10!10;UBERON:0001017!1.25e-09!73;UBERON:0005743!1.25e-09!73;UBERON:0000956!2.64e-09!21;UBERON:0001869!2.64e-09!21;UBERON:0000203!2.64e-09!21;UBERON:0002791!2.76e-09!29;UBERON:0003528!2.76e-09!29;UBERON:0001893!2.76e-09!29;UBERON:0002020!4.68e-09!34;UBERON:0002346!5.54e-09!71;UBERON:0003075!5.54e-09!71;UBERON:0007284!5.54e-09!71;UBERON:0000073!6.04e-09!75;UBERON:0001016!6.04e-09!75;UBERON:0002619!5.30e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.33e-28,10;UBERON:0000411,3.33e-28,10;UBERON:0001950,3.33e-28,10;UBERON:0002619,8.74e-23,17;UBERON:0000956,4.04e-21,21;UBERON:0001869,4.04e-21,21;UBERON:0000203,4.04e-21,21;UBERON:0003528,1.74e-19,29;UBERON:0002791,1.74e-19,29;UBERON:0001893,1.74e-19,29;UBERON:0003080,2.96e-19,40;UBERON:0000073,1.83e-18,54;UBERON:0000955,7.99e-18,47;UBERON:0006238,7.99e-18,47;UBERON:0002780,9.43e-18,39;UBERON:0001890,9.43e-18,39;UBERON:0006240,9.43e-18,39;UBERON:0003056,9.15e-17,49;UBERON:0002616,3.38e-16,46;UBERON:0002020,4.17e-16,34;UBERON:0001017,6.48e-14,73;UBERON:0001049,7.56e-14,52;UBERON:0005068,7.56e-14,52;UBERON:0006241,7.56e-14,52;UBERON:0007135,7.56e-14,52;UBERON:0001016,2.07e-13,75;UBERON:0002346,8.21e-12,64;UBERON:0003075,8.21e-12,64;UBERON:0007284,8.21e-12,64;UBERON:0004121,1.24e-10,95;UBERON:0000924,1.24e-10,95;UBERON:0006601,1.24e-10,95;UBERON:0010371,7.98e-10,73;UBERON:0004684,2.91e-08,3;UBERON:0002275,2.91e-08,3;UBERON:0010314,6.33e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0,0,2.20231761998777,2.42605942361857,1.99688493233117,0.263772575460388,0.0914876436024097,0,0,0,3.97275444219706,0,0.711858403995515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.578397427679647,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0,0.255457055208591,0,0,0,1.04853447583376,3.66000482254901,0.753926112677186,5.04090528557602,5.11430914660661,3.32460871295296,3.24482526135515,0.203678727700633,0,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,1.81092359517311,0,0,0,0.43839146485515,0,0.348252166522167,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,20.3981250107203,3.19004298375782,0,0,0.426576501070468,1.62565670302307,0.38660238396628,0.403367049246685,0,0,0.949058123089023,0.494096864172033,0,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0,0.252946148497029,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0.631016438832513,0,0,0,0,0,0,0,0.395287777946524,7.39039027770156,1.27746076687442,0.35613120733451,0.81443479676788,2.14461159864296,0,0.971122544619926,0.302323556964751,0.188605079755898,0,0.922305443831782,0.516856586336442,0.727067458955011,0,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0.741701208042039,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0.655087691238533,0.269728692769641,1.32245529160537,0,0.388844919875379,0,0,0,0.330916980914195,0.583353565032143,0.387479470433193,0.675824501963113,0.58678619322877,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,2.25218970541418,2.56412273974171,0.214368379079066,0,14.1187960654267,15.1907328047368,22.9158205375759,13.0608418581203,9.59115527678899,8.3093328712867,4.72515750162264,9.45674526770863,8.15656336171568,15.0150490408028,0,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.37456602987953,0.320125762024346,0.402048282689293,0,0,0.192909220463705,1.23625770240992,0.147198920134397,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.470546902076653,0,0.182927972872773,0,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0.818462086339379,0.309873682371932,0.192906610981141,1.49886346762768,0.467863216890817,1.07435527024149,0.191288332068843,0.220591419119515,0|short_description=p2@Trpc4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:22066
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=uniprot:Q9QUQ5
|association_with_transcript=40bp_to_ENSMUST00000029311_5end
|cluster_id=chr3:53960074..53960100,+
|description=CAGE_peak_2_at_Trpc4_5end
|id=chr3:53960074..53960100,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,2.91e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.44e-14!50;UBERON:0006238!1.44e-14!50;UBERON:0002616!7.49e-14!49;UBERON:0001049!2.16e-12!52;UBERON:0005068!2.16e-12!52;UBERON:0006241!2.16e-12!52;UBERON:0007135!2.16e-12!52;UBERON:0003080!2.81e-12!40;UBERON:0000033!4.00e-12!63;UBERON:0003056!9.87e-12!49;UBERON:0002780!1.09e-11!39;UBERON:0001890!1.09e-11!39;UBERON:0006240!1.09e-11!39;UBERON:0002021!7.09e-10!10;UBERON:0000411!7.09e-10!10;UBERON:0001950!7.09e-10!10;UBERON:0001017!1.25e-09!73;UBERON:0005743!1.25e-09!73;UBERON:0000956!2.64e-09!21;UBERON:0001869!2.64e-09!21;UBERON:0000203!2.64e-09!21;UBERON:0002791!2.76e-09!29;UBERON:0003528!2.76e-09!29;UBERON:0001893!2.76e-09!29;UBERON:0002020!4.68e-09!34;UBERON:0002346!5.54e-09!71;UBERON:0003075!5.54e-09!71;UBERON:0007284!5.54e-09!71;UBERON:0000073!6.04e-09!75;UBERON:0001016!6.04e-09!75;UBERON:0002619!5.30e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.33e-28,10;UBERON:0000411,3.33e-28,10;UBERON:0001950,3.33e-28,10;UBERON:0002619,8.74e-23,17;UBERON:0000956,4.04e-21,21;UBERON:0001869,4.04e-21,21;UBERON:0000203,4.04e-21,21;UBERON:0003528,1.74e-19,29;UBERON:0002791,1.74e-19,29;UBERON:0001893,1.74e-19,29;UBERON:0003080,2.96e-19,40;UBERON:0000073,1.83e-18,54;UBERON:0000955,7.99e-18,47;UBERON:0006238,7.99e-18,47;UBERON:0002780,9.43e-18,39;UBERON:0001890,9.43e-18,39;UBERON:0006240,9.43e-18,39;UBERON:0003056,9.15e-17,49;UBERON:0002616,3.38e-16,46;UBERON:0002020,4.17e-16,34;UBERON:0001017,6.48e-14,73;UBERON:0001049,7.56e-14,52;UBERON:0005068,7.56e-14,52;UBERON:0006241,7.56e-14,52;UBERON:0007135,7.56e-14,52;UBERON:0001016,2.07e-13,75;UBERON:0002346,8.21e-12,64;UBERON:0003075,8.21e-12,64;UBERON:0007284,8.21e-12,64;UBERON:0004121,1.24e-10,95;UBERON:0000924,1.24e-10,95;UBERON:0006601,1.24e-10,95;UBERON:0010371,7.98e-10,73;UBERON:0004684,2.91e-08,3;UBERON:0002275,2.91e-08,3;UBERON:0010314,6.33e-07,92
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0,0,2.20231761998777,2.42605942361857,1.99688493233117,0.263772575460388,0.0914876436024097,0,0,0,3.97275444219706,0,0.711858403995515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.578397427679647,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0,0.255457055208591,0,0,0,1.04853447583376,3.66000482254901,0.753926112677186,5.04090528557602,5.11430914660661,3.32460871295296,3.24482526135515,0.203678727700633,0,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,1.81092359517311,0,0,0,0.43839146485515,0,0.348252166522167,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,20.3981250107203,3.19004298375782,0,0,0.426576501070468,1.62565670302307,0.38660238396628,0.403367049246685,0,0,0.949058123089023,0.494096864172033,0,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0,0.252946148497029,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0.631016438832513,0,0,0,0,0,0,0,0.395287777946524,7.39039027770156,1.27746076687442,0.35613120733451,0.81443479676788,2.14461159864296,0,0.971122544619926,0.302323556964751,0.188605079755898,0,0.922305443831782,0.516856586336442,0.727067458955011,0,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0.741701208042039,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0.655087691238533,0.269728692769641,1.32245529160537,0,0.388844919875379,0,0,0,0.330916980914195,0.583353565032143,0.387479470433193,0.675824501963113,0.58678619322877,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,2.25218970541418,2.56412273974171,0.214368379079066,0,14.1187960654267,15.1907328047368,22.9158205375759,13.0608418581203,9.59115527678899,8.3093328712867,4.72515750162264,9.45674526770863,8.15656336171568,15.0150490408028,0,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.37456602987953,0.320125762024346,0.402048282689293,0,0,0.192909220463705,1.23625770240992,0.147198920134397,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.470546902076653,0,0.182927972872773,0,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0.818462086339379,0.309873682371932,0.192906610981141,1.49886346762768,0.467863216890817,1.07435527024149,0.191288332068843,0.220591419119515,0
|short_description=p2@Trpc4
}}

Revision as of 20:56, 3 August 2015

Short description:p2@Trpc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trpc4_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 40bp_to_ENSMUST00000029311_5end
EntrezGene:22066
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p2@Trpc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E820.40
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron2.91e-083

Uber anatomy
Ontology termp-valuen
occipital lobe3.33e-2810
visual cortex3.33e-2810
neocortex3.33e-2810
regional part of cerebral cortex8.74e-2317
cerebral cortex4.04e-2121
cerebral hemisphere4.04e-2121
pallium4.04e-2121
brain grey matter1.74e-1929
regional part of telencephalon1.74e-1929
telencephalon1.74e-1929
anterior neural tube2.96e-1940
regional part of nervous system1.83e-1854
brain7.99e-1847
future brain7.99e-1847
regional part of forebrain9.43e-1839
forebrain9.43e-1839
future forebrain9.43e-1839
pre-chordal neural plate9.15e-1749
regional part of brain3.38e-1646
gray matter4.17e-1634
central nervous system6.48e-1473
neural tube7.56e-1452
neural rod7.56e-1452
future spinal cord7.56e-1452
neural keel7.56e-1452
nervous system2.07e-1375
neurectoderm8.21e-1264
neural plate8.21e-1264
presumptive neural plate8.21e-1264
ectoderm-derived structure1.24e-1095
ectoderm1.24e-1095
presumptive ectoderm1.24e-1095
ecto-epithelium7.98e-1073
raphe nuclei2.91e-083
reticular formation2.91e-083
structure with developmental contribution from neural crest6.33e-0792
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