FFCP PHASE1:Hg19::chr7:84121947..84121959,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |||
|TSSclassifier=strong | |||
|UniProt=C9JD25 | |||
|association_with_transcript=80bp_to_ENST00000424555_5end | |||
|coexpression_cluster_id=C2002 | |||
|description=CAGE_peak_12_at_SEMA3A_5end | |||
|id=chr7:84121947..84121959,- | |||
|ontology_enrichment_celltype=CL:0002620!4.40e-22!23;CL:0000057!1.95e-11!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.90e-37;23!CL:0000153;8.23e-10;9!CL:0000447;8.23e-10;9!CL:0000138;1.66e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.82e-37,23;CL:0000057,7.07e-11,76;CL:0000153,8.05e-10,9;CL:0000447,8.05e-10,9;CL:0000058,1.62e-08,6;CL:0000138,1.62e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.74e-10!5;DOID:450!1.74e-10!5;DOID:66!1.74e-10!5;DOID:423!1.74e-10!5;DOID:0080000!1.74e-10!5;DOID:11722!1.74e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.66e-17;5!DOID:450;1.66e-17;5!DOID:66;1.66e-17;5!DOID:423;1.66e-17;5!DOID:0080000;1.66e-17;5!DOID:11722;1.66e-17;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.06e-17,5;DOID:450,2.06e-17,5;DOID:66,2.06e-17,5;DOID:423,2.06e-17,5;DOID:0080000,2.06e-17,5;DOID:11722,2.06e-17,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.65e-16!40;UBERON:0002199!2.02e-15!45;UBERON:0002416!2.02e-15!45;UBERON:0003102!8.61e-09!95;UBERON:0000488!4.07e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.41e-15;41!UBERON:0002199;3.20e-11;46!UBERON:0002416;3.20e-11;46!UBERON:0003102;3.47e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.41e-19,41;UBERON:0002199,3.74e-17,46;UBERON:0002416,3.74e-17,46 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,0,4.63508860674636,0.795285947051099,1.45990461090791,0.472674085820339,1.10864698731282,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0.468642863667593,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,1.07633781413317,0.213557388818567,3.60284231971255,10.5031883629541,4.225153698776,6.1833729610951,5.21127197728451,9.95780360223471,2.63079913935236,8.58274832429989,3.12969655383818,3.07127507955743,4.26011511019937,3.72782763442269,0.847802961552438,0.193260853163297,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.109750285408626,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,1.86156681609409,7.28052058379563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.574890092096664,0,0.464841513839837,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,15.8982283491863,0,0,0,0,0,0,0,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0.520874984799877,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,8.87517907284087,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,10.3082936549324,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0.983617892129413,0,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45772908753719,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0.212574920101683,0,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0.620916591138472,0,0,0.339848664884159,0,0,0,0,0,10.9306143692378,0.913158720509496,0,0,0.142953088353313,0,2.78979420883501,2.78173235684127,0,0,0,0,0,0,0,0,3.43660302816075,0,0,0,0.098150233615243,0,0,0,2.3196288626764,0.485710993059139,0,1.79055697645231,3.68652281410463,0.11294608203896,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,22.7191049558186,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,1.9307228228694,0,0,0,2.03448089157869,0,0,0 | |||
|short_description=p12@SEMA3A | |||
}} |
Revision as of 17:41, 22 January 2014
Short description: | p12@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SEMA3A_5end |
Coexpression cluster: | C2002_synovial_adrenal_endometrial_gastric_Fibroblast_rectal_small |
Association with transcript: | 80bp_to_ENST00000424555_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | C9JD25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.82e-37 | 23 |
fibroblast | 7.07e-11 | 76 |
GAG secreting cell | 8.05e-10 | 9 |
carbohydrate secreting cell | 8.05e-10 | 9 |
chondroblast | 1.62e-08 | 6 |
chondrocyte | 1.62e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.41e-19 | 41 |
integument | 3.74e-17 | 46 |
integumental system | 3.74e-17 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.06e-17 | 5 |
myotonic disease | 2.06e-17 | 5 |
muscle tissue disease | 2.06e-17 | 5 |
myopathy | 2.06e-17 | 5 |
muscular disease | 2.06e-17 | 5 |
myotonic dystrophy | 2.06e-17 | 5 |