FFCP PHASE1:Hg19::chr7:77428282..77428293,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13411 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=64bp_to_ENST00000275575_5end | |||
|description=CAGE_peak_4_at_PHTF2_5end | |||
|id=chr7:77428282..77428293,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.64e-12!69;UBERON:0006238!3.64e-12!69;UBERON:0002780!1.03e-11!41;UBERON:0001890!1.03e-11!41;UBERON:0006240!1.03e-11!41;UBERON:0007023!1.25e-11!115;UBERON:0003080!5.09e-11!42;UBERON:0001049!6.79e-11!57;UBERON:0005068!6.79e-11!57;UBERON:0006241!6.79e-11!57;UBERON:0007135!6.79e-11!57;UBERON:0001869!4.90e-10!32;UBERON:0001893!7.53e-10!34;UBERON:0002616!7.57e-10!59;UBERON:0001017!1.15e-09!82;UBERON:0002020!2.27e-09!34;UBERON:0003528!2.27e-09!34;UBERON:0002791!2.38e-09!33;UBERON:0005743!3.85e-09!86;UBERON:0002619!6.49e-09!22;UBERON:0000073!8.56e-09!94;UBERON:0001016!8.56e-09!94;UBERON:0001950!3.24e-08!20;UBERON:0000033!4.70e-08!123;UBERON:0000956!6.53e-08!25;UBERON:0000203!6.53e-08!25;UBERON:0000153!7.59e-08!129;UBERON:0007811!7.59e-08!129;UBERON:0003075!5.71e-07!86;UBERON:0007284!5.71e-07!86;UBERON:0002346!8.57e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.69e-09;32!UBERON:0002780;7.64e-09;41!UBERON:0001890;7.64e-09;41!UBERON:0001893;7.79e-08;34!UBERON:0002791;1.09e-07;32!UBERON:0000955;1.31e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,5.01e-11,68;UBERON:0006238,5.01e-11,68;UBERON:0002780,5.45e-10,41;UBERON:0001890,5.45e-10,41;UBERON:0003080,5.45e-10,41;UBERON:0006240,5.45e-10,41;UBERON:0001869,8.65e-10,32;UBERON:0001016,4.46e-09,89;UBERON:0001893,4.49e-09,34;UBERON:0001017,1.58e-08,81;UBERON:0000073,2.53e-08,53;UBERON:0002616,2.53e-08,53;UBERON:0002791,3.08e-08,32;UBERON:0001049,1.06e-07,56;UBERON:0005068,1.06e-07,56;UBERON:0006241,1.06e-07,56;UBERON:0007135,1.06e-07,56;UBERON:0003528,1.24e-07,34;UBERON:0002020,1.24e-07,34;UBERON:0005090,8.83e-07,2;UBERON:0001630,8.83e-07,2;UBERON:0003056,9.29e-07,61 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,1.00707360754392,0.284338464974843,0,0,0,0,0.447830948479849,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0.546138611262131,0.889509253863555,0.426730222566507,1.60158394814405,0.574752439954483,1.98313461835459,0,0.569212969109448,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0,0.473447805734733,0,0.557052284425868,0.589211814949674,0.664601683750863,0.812411591295047,0.384273959177026,0.910415432919148,0.164437904603676,0.276350017785848,0.579606171470105,0.296573126324121,0,0,1.24640276967323,0,0.34362744548263,1.26509846009751,0.95569624297229,0,0,0.602300476311091,0.127986611154418,0,0,0,0,0,0,0,0,0.895037932904712,0.361439152384566,1.00267582127178,0.434539556882471,2.3858578411533,0.486634870302636,0.567208902984407,0,0.43917392846563,0.392937226493138,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0.759783069987479,0.264818361626438,0,0.709336764396714,0,0,0.49333509683432,0.622422070799533,0.269421344139376,0,0,1.15235184896,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0.30648779579902,0.300476117813194,0.340296549480063,0.179389635688862,1.06778694409284,1.05965950579781,0,0.618315175430633,0,0.558350568994769,0.506328996723799,0.487185025805993,0.252433774244115,0.644349290496095,0.161646056818812,0.355009592516614,0.604512589365842,0.339121184620975,0.386521706326594,0.545492241181669,0.286804595389004,0.121973706129595,0.132529768321485,0.232387885739037,0.310983165046111,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0.217879444092406,0,0.539325232640658,0.392442930250692,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0.109750285408626,0,0,0.277765335475589,0,0,0,0.115930404975077,0.587043471179108,0.144366447761074,0,0.380508304469197,0,0,0,0,0.148631162288728,0.93733833986777,1.00789276919316,0.425325291727159,0.268675568108545,0,0,0,0.528290604079356,1.03664057770386,1.29707958075265,1.13618190083742,0.571481048629521,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.2933531432838,0.517086863031111,0,0,1.59562869950922,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,1.06617584622764,0,0,0.871533458600294,0.399891964728228,0,0,0,0.718874566474748,0,0,0.434343920002738,0.205476322550383,0.537182889719687,0,0,0.215627574859517,0.385029108839245,0.254094624222463,0,0,0.335032530668698,0,0,0,0.414415513436035,0.49076596687656,0.500170521059677,0,1.24782516918484,0.713715955188647,0.788512075169673,0.35142424497814,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,0,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,1.24053903909388,0.460385919864187,0.280660094433074,0.640695746278505,1.53512174720011,0.965123526861645,0,0,0,0.246381468041427,0.519254429183621,0.116210378459959,1.0877350463246,0,0.184161977871793,0.803701137152247,0.546273504020151,0.655622074797121,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.366277859273374,0.330037999682352,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0.537101224341368,0.145016693914229,0.170453254832202,0.178064071293475,0.165284915360978,0.384380134730212,0.638063562472921,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0.359744915166629,0.54907405947211,0.706874414074119,0.202182481573316,0,0,0.48763373908959,0,0,0.682499557039929,0.848432591722276,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,1.00387946542836,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0.443430153536676,0.459446800413919,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,1.08006287447623,0,0.213648142254946,0,0.490080431962063,0,0.28853842595289,0.0711418433484141,0.159426272728822,0,0.191505370132367,1.05836791361941,0.324621940274555,0,0.684704037099577,0.156679895773023,0,0.338583555603207,0,0,0,0.343505344755765,0,0,0,0,0.556812347790485,0,0,0.99921590399346,1.4098700508785,1.12284324244932,0,0.121360521749513,0.111443384277478,0.568272293612826,0,0.296964680832639,0,2.98244294329889,0.140669416410513,0,0,1.90012867315194,0.19924798825107,0.828851746593443,0.503865495708552,0.102268682502155,0,0.311039587661807,0.0898683511473268,0.179021174675609,0.511572370226872,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| |||
|short_description=p4@PHTF2 | |||
}} |
Revision as of 17:31, 22 January 2014
Short description: | p4@PHTF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PHTF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENST00000275575_5end |
EntrezGene: | PHTF2 |
HGNC: | 13411 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 5.01e-11 | 68 |
future brain | 5.01e-11 | 68 |
regional part of forebrain | 5.45e-10 | 41 |
forebrain | 5.45e-10 | 41 |
anterior neural tube | 5.45e-10 | 41 |
future forebrain | 5.45e-10 | 41 |
cerebral hemisphere | 8.65e-10 | 32 |
nervous system | 4.46e-09 | 89 |
telencephalon | 4.49e-09 | 34 |
central nervous system | 1.58e-08 | 81 |
regional part of nervous system | 2.53e-08 | 53 |
regional part of brain | 2.53e-08 | 53 |
regional part of telencephalon | 3.08e-08 | 32 |
neural tube | 1.06e-07 | 56 |
neural rod | 1.06e-07 | 56 |
future spinal cord | 1.06e-07 | 56 |
neural keel | 1.06e-07 | 56 |
brain grey matter | 1.24e-07 | 34 |
gray matter | 1.24e-07 | 34 |
muscle structure | 8.83e-07 | 2 |
muscle organ | 8.83e-07 | 2 |
pre-chordal neural plate | 9.29e-07 | 61 |