FFCP PHASE1:Hg19::chr7:77428227..77428242,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13411 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000275575_5end | |||
|description=CAGE_peak_3_at_PHTF2_5end | |||
|id=chr7:77428227..77428242,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.37e-11!94;UBERON:0001016!9.37e-11!94;UBERON:0005743!1.34e-09!86;UBERON:0001017!6.00e-09!82;UBERON:0000955!6.40e-08!69;UBERON:0006238!6.40e-08!69;UBERON:0002780!8.85e-08!41;UBERON:0001890!8.85e-08!41;UBERON:0006240!8.85e-08!41;UBERON:0001893!9.81e-08!34;UBERON:0002791!2.50e-07!33;UBERON:0003080!3.39e-07!42;UBERON:0002020!3.58e-07!34;UBERON:0003528!3.58e-07!34;UBERON:0000924!3.64e-07!173;UBERON:0006601!3.64e-07!173;UBERON:0001049!4.33e-07!57;UBERON:0005068!4.33e-07!57;UBERON:0006241!4.33e-07!57;UBERON:0007135!4.33e-07!57;UBERON:0001869!5.95e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.81e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.18e-10,89;UBERON:0001017,4.34e-10,81;UBERON:0001893,1.25e-09,34;UBERON:0001049,3.06e-09,56;UBERON:0005068,3.06e-09,56;UBERON:0006241,3.06e-09,56;UBERON:0007135,3.06e-09,56;UBERON:0000955,3.70e-09,68;UBERON:0006238,3.70e-09,68;UBERON:0002780,7.12e-09,41;UBERON:0001890,7.12e-09,41;UBERON:0003080,7.12e-09,41;UBERON:0006240,7.12e-09,41;UBERON:0001869,1.59e-08,32;UBERON:0002791,1.81e-08,32;UBERON:0000073,2.45e-08,53;UBERON:0002616,2.45e-08,53;UBERON:0003528,2.48e-08,34;UBERON:0002020,2.48e-08,34;UBERON:0002619,6.85e-08,22;UBERON:0001950,7.81e-08,20;UBERON:0002346,2.80e-07,86;UBERON:0003056,6.71e-07,61;UBERON:0003075,7.56e-07,82;UBERON:0007284,7.56e-07,82 | |||
|phase1_expression=0.908391896352783,0.642301571672949,1.26858963686374,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.247532705920093,0.662794751455832,1.34465029290355,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0,0.572471974262113,0.410623275218653,0.376627918784408,0,0.0821005894499457,0.0787107813136792,0.786728553697808,0,0.309632246632152,0.919421224478927,0.6024118375565,0,1.16200800870452,0.142169232487422,0,0,0,0,1.11957737119962,0.971680998056939,1.28787783817093,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0.545812300115692,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0.79566670879636,0.182664153764634,0,0.546138611262131,0,0,0,1.14950487990897,0,0,0,0,0.764546456250458,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,4.01077644786625,0.589211814949674,0.664601683750863,0.270803863765016,2.17755243533648,1.8208308658383,1.15106533222573,0.276350017785848,1.15921234294021,0,0,0,1.81294948316106,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,1.15076305659177,1.0843174571537,1.50401373190767,1.01392563272577,8.74814541756209,2.91980922181582,0.472674085820339,0.443458794925128,0.263504357079378,0.982343066232845,0.364295288292542,0.741568885568859,2.59637914923747,4.17911369518241,1.86141144726411,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,6.95760732373446,1.8994576749687,1.45650098894541,2.0078563452417,1.41867352879343,0,0,1.2333377420858,1.24484414159907,0.538842688278752,0.163461903113459,0.151357427644931,1.15235184896,0,0,0,0.448346041655403,0.117434498643765,0,0.702254033511242,0.408308342509787,0.491337269247072,0.309977343527296,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0.831192346452549,0.438977620880838,1.22595118319608,0.751190294532984,0.794025282120147,1.07633781413317,1.2813443329114,3.17897851739343,2.10063767259082,1.75189299705346,2.06112432036503,0.558350568994769,2.36286865137773,1.75386609290158,2.52433774244115,2.20919756741518,1.61646056818812,0,2.51880245569101,1.18692414617341,0,1.63647672354501,0.286804595389004,0.487894824518382,0.132529768321485,0.232387885739037,0,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0.709840800239063,0.505754070234305,0.241011029883482,0.330881918197182,0.217879444092406,0.949082476444386,0.539325232640658,0.588664395376038,0,0,0,1.2347220339942,0,0,0,0,1.32438929824395,1.22988438543114,0.171567810298526,0.329250856225877,0,0.201057944823262,0.277765335475589,0,0,0,0.579652024875384,2.34817388471643,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0.492434012174795,0.468008530278475,0.445893486866185,0,2.01578553838631,0.283550194484773,0.358234090811393,0.581267877027924,0,5.41929561685538,1.84901711427775,0.207328115540772,1.29707958075265,1.38866676769018,1.39695367442772,1.14596527667483,0,1.71072446022705,0.514137463516618,0.600686115687835,0.857479297891735,0.224262168690721,0.43596006883328,0.4400297149257,6.85140093516222,0,0,5.58470044828228,4.16029747645464,0,1.41849132023278,0,4.14636181608628,0.542621605391443,0,0.65147236858747,3.19852753868291,0.791951872933429,0.904318131178758,4.35766729300147,1.49959486773086,1.2162378064119,0,2.10833939483032,2.87549826589899,1.14861935834114,0,0.144781306667579,0.410952645100767,0.358121926479791,0.336255431980582,0,0.215627574859517,0,3.30323011489202,1.30139853857622,0.773288812777695,1.17261385734044,1.27587750330633,0,0,0,1.34960640891054,0,0,2.9115920614313,3.92543775353756,2.36553622550902,0.702848489956279,0.902838299183157,2.27407504055985,0,1.32845119707087,0.368738337083406,1.04260337361699,0,0.343143423810856,0,0.215714200818617,0,0.303127571446259,0,0.30239029332968,2.97729369382532,4.29693525206575,2.52594084989766,3.71603532841533,5.11707249066703,3.86049410744658,0,0.154209693802656,0.887808626565635,0.98552587216571,1.03850885836724,0.813472649219715,0.966875596732978,0.802025881213139,0.184161977871793,1.60740227430449,0.728364672026868,1.96686622439136,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,1.64007322849853,1.95227036798582,1.13345112812495,1.19040304263846,2.22775649785588,0.574265537996172,0.650060246036521,1.6068392984416,0.193341436584244,0.770243085573222,0.15350367472613,0.413509717453592,0.537101224341368,0.290033387828457,0.340906509664404,0.267096106940212,0.495854746082934,0.960950336825531,1.40373983744043,0.2023155617111,1.39453664789186,2.83331112147576,0.6970372701606,0,0,0,0.55597265731176,1.28812398067792,0,0.949138274156178,1.5250415513906,0,0,1.27281299170375,0,2.87795932133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| |||
|short_description=p3@PHTF2 | |||
}} |
Revision as of 17:31, 22 January 2014
Short description: | p3@PHTF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHTF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000275575_5end |
EntrezGene: | PHTF2 |
HGNC: | 13411 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.18e-10 | 89 |
central nervous system | 4.34e-10 | 81 |
telencephalon | 1.25e-09 | 34 |
neural tube | 3.06e-09 | 56 |
neural rod | 3.06e-09 | 56 |
future spinal cord | 3.06e-09 | 56 |
neural keel | 3.06e-09 | 56 |
brain | 3.70e-09 | 68 |
future brain | 3.70e-09 | 68 |
regional part of forebrain | 7.12e-09 | 41 |
forebrain | 7.12e-09 | 41 |
anterior neural tube | 7.12e-09 | 41 |
future forebrain | 7.12e-09 | 41 |
cerebral hemisphere | 1.59e-08 | 32 |
regional part of telencephalon | 1.81e-08 | 32 |
regional part of nervous system | 2.45e-08 | 53 |
regional part of brain | 2.45e-08 | 53 |
brain grey matter | 2.48e-08 | 34 |
gray matter | 2.48e-08 | 34 |
regional part of cerebral cortex | 6.85e-08 | 22 |
neocortex | 7.81e-08 | 20 |
neurectoderm | 2.80e-07 | 86 |
pre-chordal neural plate | 6.71e-07 | 61 |
neural plate | 7.56e-07 | 82 |
presumptive neural plate | 7.56e-07 | 82 |