FFCP PHASE1:Hg19::chr7:73469042..73469059,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_at_chr7:73469042..73469059,+ | |||
|id=chr7:73469042..73469059,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.01e-14!75;CL:0002334!3.40e-12!12;CL:0000136!3.62e-10!15;CL:0002615!5.36e-09!3;CL:0002580!7.45e-09!3;CL:0002620!6.05e-08!23;CL:0002579!7.35e-08!3;CL:0000153!7.99e-07!9;CL:0000447!7.99e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002615;6.48e-24;3!CL:0002580;1.68e-23;3!CL:0000136;9.66e-21;13!CL:0002617;5.01e-16;2!CL:0002334;1.21e-15;12!CL:0002581;4.02e-09;1!CL:0002616;4.88e-09;1!CL:0000153;6.94e-08;9!CL:0000447;6.94e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.45e-31,15;CL:0002615,6.25e-24,3;CL:0002580,1.68e-23,3;CL:0002617,3.18e-16,2;CL:0002334,1.39e-15,12;CL:0002581,3.87e-09,1;CL:0002616,5.28e-09,1;CL:0000153,5.94e-08,9;CL:0000447,5.94e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.22e-08!5;DOID:450!9.22e-08!5;DOID:66!9.22e-08!5;DOID:423!9.22e-08!5;DOID:0080000!9.22e-08!5;DOID:11722!9.22e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;1.42e-08;1!DOID:4235;1.42e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.22e-08,1;DOID:4235,2.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004457!1.69e-15!12;UBERON:0000042!1.69e-15!12;UBERON:0003688!3.77e-15!6;UBERON:0002358!3.77e-15!6;UBERON:0003684!3.77e-15!6;UBERON:0001178!3.77e-15!6;UBERON:0002097!7.59e-07!40;UBERON:0002199!9.41e-07!45;UBERON:0002416!9.41e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.91e-21;9!UBERON:0000042;7.91e-21;9!UBERON:0003688;1.42e-20;6!UBERON:0002358;1.42e-20;6!UBERON:0003684;1.42e-20;6!UBERON:0001178;1.42e-20;6!UBERON:0000310;8.00e-19;10!UBERON:0001443;4.22e-17;11!UBERON:0005406;1.94e-16;2!UBERON:0001013;9.83e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.78e-20,6;UBERON:0002358,1.78e-20,6;UBERON:0003684,1.78e-20,6;UBERON:0001178,1.78e-20,6;UBERON:0000310,6.41e-19,10;UBERON:0001443,3.46e-17,11;UBERON:0005406,2.01e-16,2;UBERON:0004457,1.39e-15,12;UBERON:0000042,1.39e-15,12;UBERON:0001013,1.08e-08,14 | |||
|phase1_expression=1.99846217197612,7.49351833618441,3.94672331468719,12.0087958023756,5.81049422755474,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0.434539556882471,0,2.91980922181582,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7308685049499,0,0,0,0,0,0,2.14541457059314,2.25357088359895,0,0.89694817844431,0.213557388818567,0.423863802319124,0.900273288253207,0,0,0,0.337552664482532,0.194874010322397,0.504867548488229,0.184099797284599,0,0.710019185033229,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0.630809660135739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48107807818777,2.455391572609,10.9457436828899,0.384417447767103,1.02341449813341,0.64341568457443,5.93672265779964,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68886108238131,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60024988196838,1.03018711554838,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0.3414369541879,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.4226557275834,1.0195626881269,0,0.322289439867886,0,0,0,0,0,0.458729283404541,0,0,0,0,1.5870805215462,0.743990036333503,0,1.29787968637137,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,2.99394320891412,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p@chr7:73469042..73469059,+ | |||
}} |
Revision as of 17:21, 22 January 2014
Short description: | p@chr7:73469042..73469059, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:73469042..73469059, + |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.45e-31 | 15 |
adipocyte of omentum tissue | 6.25e-24 | 3 |
preadipocyte of the breast | 1.68e-23 | 3 |
adipocyte of breast | 3.18e-16 | 2 |
preadipocyte | 1.39e-15 | 12 |
perirenal preadipocyte | 3.87e-09 | 1 |
perirenal adipocyte cell | 5.28e-09 | 1 |
GAG secreting cell | 5.94e-08 | 9 |
carbohydrate secreting cell | 5.94e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.78e-20 | 6 |
peritoneum | 1.78e-20 | 6 |
abdominal cavity | 1.78e-20 | 6 |
visceral peritoneum | 1.78e-20 | 6 |
breast | 6.41e-19 | 10 |
chest | 3.46e-17 | 11 |
perirenal fat | 2.01e-16 | 2 |
cavity lining | 1.39e-15 | 12 |
serous membrane | 1.39e-15 | 12 |
adipose tissue | 1.08e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.22e-08 | 1 |
spindle cell sarcoma | 2.22e-08 | 1 |