FFCP PHASE1:Hg19::chr7:45025791..45025805,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27797 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=430bp_to_uc003tmk.3_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_3_at_SNHG15_5end | |||
|id=chr7:45025791..45025805,- | |||
|ontology_enrichment_celltype=CL:0000988!1.07e-33!182;CL:0000037!1.52e-32!172;CL:0000566!1.52e-32!172;CL:0002032!5.87e-31!165;CL:0000837!5.87e-31!165;CL:0000738!7.76e-20!140;CL:0002087!7.71e-18!119;CL:0000763!1.23e-15!112;CL:0000049!1.23e-15!112;CL:0000542!2.90e-15!53;CL:0000051!2.90e-15!53;CL:0002031!4.47e-15!124;CL:0000838!1.67e-14!52;CL:0000134!9.01e-10!358;CL:0002320!4.54e-09!365;CL:0000219!4.63e-09!390;CL:0000453!8.74e-08!5;CL:0000080!1.51e-07!6;CL:0000034!1.86e-07!444;CL:0000003!2.50e-07!722;CL:0000945!4.77e-07!24;CL:0000826!4.77e-07!24;CL:0000048!8.53e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000453;4.46e-28;5!CL:0000623;8.80e-17;3!CL:0000767;1.83e-16;3!CL:0000990;1.62e-15;8!CL:0002393;1.23e-14;6!CL:0002397;1.23e-14;6!CL:0001014;9.12e-13;2!CL:0001016;9.12e-13;2!CL:0000451;1.19e-12;10!CL:0000081;5.09e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.49e-29,177;CL:0000453,5.16e-28,5;CL:0002032,2.25e-26,161;CL:0000837,2.25e-26,161;CL:0000037,5.01e-25,168;CL:0000763,1.84e-21,108;CL:0000049,1.84e-21,108;CL:0000623,1.22e-16,3;CL:0000825,1.22e-16,3;CL:0000767,1.44e-16,3;CL:0000990,1.75e-15,8;CL:0000738,5.51e-13,136;CL:0001014,9.68e-13,2;CL:0001016,9.68e-13,2;CL:0000451,1.26e-12,10;CL:0002393,7.32e-10,9;CL:0002397,7.32e-10,9;CL:0000134,1.25e-08,354;CL:0002320,2.44e-08,361;CL:0000081,4.72e-08,11;CL:0000219,2.54e-07,386;CL:0002031,4.63e-07,120;CL:0000034,4.76e-07,441;CL:0002127,9.25e-07,1;CL:0000914,9.25e-07,1;CL:0000911,9.25e-07,1;CL:0000814,9.25e-07,1;CL:0002042,9.25e-07,1;CL:0002039,9.25e-07,1;CL:0002040,9.25e-07,1;CL:0002041,9.25e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.67e-25!51;DOID:0060083!5.67e-25!51;DOID:1240!2.74e-21!39;DOID:8692!1.71e-14!31;DOID:1036!2.54e-09!8;DOID:0060058!1.57e-08!10;DOID:0050686!1.37e-07!137;DOID:162!1.83e-07!235;DOID:14566!2.78e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.52e-15;51!DOID:0060083;1.52e-15;51!DOID:8692;1.58e-15;31!DOID:1240;6.05e-14;39!DOID:0060060;3.13e-07;1!DOID:0060061;3.13e-07;1!DOID:8691;3.13e-07;1!DOID:9119;3.51e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.52e-21,51;DOID:0060083,3.52e-21,51;DOID:1240,3.72e-21,39;DOID:8692,6.88e-16,31;DOID:0060060,3.13e-07,1;DOID:0060061,3.13e-07,1;DOID:8691,3.13e-07,1;DOID:9119,3.32e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.67e-09!9;UBERON:0002384!1.84e-08!375;UBERON:0001557!3.93e-07!19 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.05e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.656804715599566,0.393553906568396,1.96682138424452,1.53531759238885,1.39334510984468,0,0.30120591877825,0,0.0774672005803016,0.284338464974843,0.293600439334847,5.53995408531877,1.60435557976113,1.73608696572681,0.223915474239924,0,0,0,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0.870627715885752,0,0,0,0.521482918420201,0.434377689410233,0,1.10483290796269,0,1.47878700418359,0.637812899895131,0.419317291016752,0.44931452458598,0.150176892841506,0.32145117339416,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,1.32171328579026,1.68152568894461,0.263384084775077,0.393419540227666,0,0,0.334372990781356,0,0,0,0.668462741311041,0,0.443067789167242,0,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.339928028092699,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.661763836394364,0.217879444092406,0.474541238222193,0.404493924480493,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,1.79336230389644,1.18218456121156,2.58753089831421,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.853820462427555,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0.144269212976445,0.0711418433484141,0.318852545457645,0.59873811429845,4.78763425330917,5.08016598537319,1.29848776109822,1.96558024679421,0.228234679033192,0.47003968731907,0,2.53937666702405,0.802940375518498,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,1.6227340708559,6.32836739195858,1.4098700508785,0,0,0,0.66866030566487,0,0,0,0,0,0,0,2.80166586185491,0,0,0.276283915531148,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0.627921025580099,1.49590513710141,0.225595660617181,0.784250137270958,0.503464760927528,0.189753732724185,0.794682894901893,0,0,0,0,0,0,0,4.74433805888995,1.85345908419754,2.71497068714184,0,0,0,0.729819156862664,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.870806981601766,0.146178634172371,0.246346371159628,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0.144090417154106,0.114536596165916,0,0.576219191952599,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,6.30929650270355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0.321506296930038,0.412618309791701,0.415440338029185,22.947336938253,6.1904156364636,0,0,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,3.11951578847488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0.770479321629213,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0.607719912354764,0,2.53318401491205,1.59437808376036,2.12635012532597,0,0.491545817507439,0,7.39953364663241,0.213383459388282,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0,0,0,0.315446980005013,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0.459474497674225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p3@SNHG15 | |||
}} |
Revision as of 16:52, 22 January 2014
Short description: | p3@SNHG15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNHG15_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 430bp_to_uc003tmk.3_5end |
EntrezGene: | SNHG15 |
HGNC: | 27797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.05e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.52e-21 | 51 |
immune system cancer | 3.52e-21 | 51 |
leukemia | 3.72e-21 | 39 |
myeloid leukemia | 6.88e-16 | 31 |
non-Hodgkin lymphoma | 3.13e-07 | 1 |
cutaneous T cell lymphoma | 3.13e-07 | 1 |
mycosis fungoides | 3.13e-07 | 1 |
acute myeloid leukemia | 3.32e-07 | 1 |