FFCP PHASE1:Mm9::chr3:119486168..119486179,-: Difference between revisions
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{{FFCP|EntrezGene=56195|HGNC=|UniProt=Q91Z31,Q3V328|association_with_transcript=126bp_to_ENSMUST00000029780,NM_019550,uc008rdj.2,uc008rdk.2,uc008rdl.2,uc008rdm.2_5end|description=CAGE_peak_2_at_Ptbp2_5end|id=chr3:119486168..119486179,-|ontology_enrichment_celltype=CL:0000117!1.69e-09!23;CL:0000337!1.69e-09!23;CL:0000540!2.02e-08!33;CL:0000047!2.02e-08!33;CL:0000031!2.02e-08!33;CL:0000404!2.02e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.18e-10,23;CL:0000337,6.18e-10,23;CL:0000540,7.89e-09,33;CL:0000047,7.89e-09,33;CL:0000031,7.89e-09,33;CL:0000404,7.89e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!9.14e-15!63;UBERON:0002346!1.83e-14!71;UBERON:0003075!1.83e-14!71;UBERON:0007284!1.83e-14!71;UBERON:0003056!1.39e-13!49;UBERON:0004121!9.53e-13!102;UBERON:0000924!9.53e-13!102;UBERON:0006601!9.53e-13!102;UBERON:0001049!7.62e-12!52;UBERON:0005068!7.62e-12!52;UBERON:0006241!7.62e-12!52;UBERON:0007135!7.62e-12!52;UBERON:0001017!1.11e-11!73;UBERON:0005743!1.11e-11!73;UBERON:0000955!3.14e-11!50;UBERON:0006238!3.14e-11!50;UBERON:0002616!6.48e-11!49;UBERON:0000073!7.96e-11!75;UBERON:0001016!7.96e-11!75;UBERON:0003080!1.47e-09!40;UBERON:0002020!3.94e-09!34;UBERON:0002780!4.39e-09!39;UBERON:0001890!4.39e-09!39;UBERON:0006240!4.39e-09!39;UBERON:0000153!6.05e-08!94;UBERON:0002791!2.36e-07!29;UBERON:0003528!2.36e-07!29;UBERON:0001893!2.36e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.22e-16,64;UBERON:0003075,3.22e-16,64;UBERON:0007284,3.22e-16,64;UBERON:0010371,7.91e-16,73;UBERON:0004121,4.60e-14,95;UBERON:0000924,4.60e-14,95;UBERON:0006601,4.60e-14,95;UBERON:0003056,4.63e-14,49;UBERON:0010314,1.08e-13,92;UBERON:0000073,1.29e-13,54;UBERON:0001017,7.59e-13,73;UBERON:0001049,1.25e-12,52;UBERON:0005068,1.25e-12,52;UBERON:0006241,1.25e-12,52;UBERON:0007135,1.25e-12,52;UBERON:0001016,7.05e-12,75;UBERON:0000955,1.08e-10,47;UBERON:0006238,1.08e-10,47;UBERON:0002616,2.24e-10,46;UBERON:0003080,6.45e-10,40;UBERON:0002020,1.74e-09,34;UBERON:0002780,1.99e-09,39;UBERON:0001890,1.99e-09,39;UBERON:0006240,1.99e-09,39;UBERON:0003528,1.18e-07,29;UBERON:0002791,1.18e-07,29;UBERON:0001893,1.18e-07,29|phase1_expression=3.68342348341026,0.697950815278722,0.454999239389536,0.90739263392049,0,0.839396359559449,1.40167584357315,0.387369970324729,1.12630977721333,0.70219357896598,0.171217968225505,0.398860794976682,0.342401459862411,0.699363219351979,0,0.404950534779652,0.699561878128147,1.10411757875383,1.64537320326887,1.27316895539409,2.8064285749853,0.496454756004426,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0,15.8481681015439,1.1554064790051,0.664938581433969,1.83752420636132,1.25559489221072,0.7813353445238,1.0470474879476,2.94115744015507,2.73218193983378,2.42755176515577,1.38486499773135,0.405507724878058,0.734187008646726,0,0,0.439372365468944,0.388859798148567,0.279972843250725,0,1.8456086666351,1.45072428402269,1.00828139742739,0.257259436035947,0.286533439938757,0.515672092277442,7.68802551266472,5.81890077199236,3.80298842103708,0,0,0.449949858640699,0,0,0,0.384218305321555,4.87341177849845,3.10513658162888,2.94454945891935,1.99955689082663,3.53389665522582,6.98197555525238,4.60058260887535,0,4.40463523997555,4.34136949489638,4.91540906419979,4.74790635828698,5.58074625974699,7.29278718779464,3.62937898701795,5.6276261003168,5.65353516774197,5.59794312399969,7.68807076315156,5.96478226640962,1.06016670666458,0.529000920747499,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,0.170430322578058,0.779358013808606,0.70667914902068,2.39433813620357,0,2.54805239706646,0,0.649473123033642,0.253359865475099,0.505524445014783,0.45673551887624,1.8125651855302,2.52351636410202,2.25530924795977,1.82679286987285,1.15307748628029,1.50722640552623,3.29248379979973,1.13099932196708,0.247194967734374,1.44599356919912,3.5384422077995,0.647067399789637,1.54589062922275,1.45462575940567,5.59175283654366,9.36898550436951,5.86450779077674,1.02182822083437,1.91704199209472,0.599902730993408,0.889491589511453,5.24267237916879,3.66000482254901,6.03140890141749,5.38855392596057,5.8814555185976,4.77912502486988,6.65189178577806,2.03678727700633,1.49288364732112,2.0217820674694,2.10441855886474,5.85541993332167,7.81667155073808,6.30217454318722,4.67184935290717,5.91917542616552,8.19927809823039,6.09061209638237,3.10444044886819,4.74249584452253,5.10586416453112,4.92663147659057,1.53437012699302,3.05851974148158,3.1342694986995,2.26360350048738,2.7864797354589,1.40442637462647,0.257347907114715,1.13665399758237,3.52113813310353,3.04883877975425,3.06105504483725,4.7348947117042,2.95146347621106,2.46827380619805,3.25547522650571,1.60964040839772,2.80236821681207,1.97471819896177,1.31333971263276,1.54030738137126,1.31579988682799,1.3173006917463,1.34206418760372,5.46753866266731,11.3195073617213,0.660837565967596,1.32225283331772,4.69234151177515,4.87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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56195 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91Z31,uniprot:Q3V328 | |||
|association_with_transcript=126bp_to_ENSMUST00000029780,NM_019550,uc008rdj.2,uc008rdk.2,uc008rdl.2,uc008rdm.2_5end | |||
|cluster_id=chr3:119486168..119486179,- | |||
|description=CAGE_peak_2_at_Ptbp2_5end | |||
|id=chr3:119486168..119486179,- | |||
|ontology_enrichment_celltype=CL:0000117!1.69e-09!23;CL:0000337!1.69e-09!23;CL:0000540!2.02e-08!33;CL:0000047!2.02e-08!33;CL:0000031!2.02e-08!33;CL:0000404!2.02e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.18e-10,23;CL:0000337,6.18e-10,23;CL:0000540,7.89e-09,33;CL:0000047,7.89e-09,33;CL:0000031,7.89e-09,33;CL:0000404,7.89e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.14e-15!63;UBERON:0002346!1.83e-14!71;UBERON:0003075!1.83e-14!71;UBERON:0007284!1.83e-14!71;UBERON:0003056!1.39e-13!49;UBERON:0004121!9.53e-13!102;UBERON:0000924!9.53e-13!102;UBERON:0006601!9.53e-13!102;UBERON:0001049!7.62e-12!52;UBERON:0005068!7.62e-12!52;UBERON:0006241!7.62e-12!52;UBERON:0007135!7.62e-12!52;UBERON:0001017!1.11e-11!73;UBERON:0005743!1.11e-11!73;UBERON:0000955!3.14e-11!50;UBERON:0006238!3.14e-11!50;UBERON:0002616!6.48e-11!49;UBERON:0000073!7.96e-11!75;UBERON:0001016!7.96e-11!75;UBERON:0003080!1.47e-09!40;UBERON:0002020!3.94e-09!34;UBERON:0002780!4.39e-09!39;UBERON:0001890!4.39e-09!39;UBERON:0006240!4.39e-09!39;UBERON:0000153!6.05e-08!94;UBERON:0002791!2.36e-07!29;UBERON:0003528!2.36e-07!29;UBERON:0001893!2.36e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.22e-16,64;UBERON:0003075,3.22e-16,64;UBERON:0007284,3.22e-16,64;UBERON:0010371,7.91e-16,73;UBERON:0004121,4.60e-14,95;UBERON:0000924,4.60e-14,95;UBERON:0006601,4.60e-14,95;UBERON:0003056,4.63e-14,49;UBERON:0010314,1.08e-13,92;UBERON:0000073,1.29e-13,54;UBERON:0001017,7.59e-13,73;UBERON:0001049,1.25e-12,52;UBERON:0005068,1.25e-12,52;UBERON:0006241,1.25e-12,52;UBERON:0007135,1.25e-12,52;UBERON:0001016,7.05e-12,75;UBERON:0000955,1.08e-10,47;UBERON:0006238,1.08e-10,47;UBERON:0002616,2.24e-10,46;UBERON:0003080,6.45e-10,40;UBERON:0002020,1.74e-09,34;UBERON:0002780,1.99e-09,39;UBERON:0001890,1.99e-09,39;UBERON:0006240,1.99e-09,39;UBERON:0003528,1.18e-07,29;UBERON:0002791,1.18e-07,29;UBERON:0001893,1.18e-07,29 | |||
|phase1_expression=3.68342348341026,0.697950815278722,0.454999239389536,0.90739263392049,0,0.839396359559449,1.40167584357315,0.387369970324729,1.12630977721333,0.70219357896598,0.171217968225505,0.398860794976682,0.342401459862411,0.699363219351979,0,0.404950534779652,0.699561878128147,1.10411757875383,1.64537320326887,1.27316895539409,2.8064285749853,0.496454756004426,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0,15.8481681015439,1.1554064790051,0.664938581433969,1.83752420636132,1.25559489221072,0.7813353445238,1.0470474879476,2.94115744015507,2.73218193983378,2.42755176515577,1.38486499773135,0.405507724878058,0.734187008646726,0,0,0.439372365468944,0.388859798148567,0.279972843250725,0,1.8456086666351,1.45072428402269,1.00828139742739,0.257259436035947,0.286533439938757,0.515672092277442,7.68802551266472,5.81890077199236,3.80298842103708,0,0,0.449949858640699,0,0,0,0.384218305321555,4.87341177849845,3.10513658162888,2.94454945891935,1.99955689082663,3.53389665522582,6.98197555525238,4.60058260887535,0,4.40463523997555,4.34136949489638,4.91540906419979,4.74790635828698,5.58074625974699,7.29278718779464,3.62937898701795,5.6276261003168,5.65353516774197,5.59794312399969,7.68807076315156,5.96478226640962,1.06016670666458,0.529000920747499,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,0.170430322578058,0.779358013808606,0.70667914902068,2.39433813620357,0,2.54805239706646,0,0.649473123033642,0.253359865475099,0.505524445014783,0.45673551887624,1.8125651855302,2.52351636410202,2.25530924795977,1.82679286987285,1.15307748628029,1.50722640552623,3.29248379979973,1.13099932196708,0.247194967734374,1.44599356919912,3.5384422077995,0.647067399789637,1.54589062922275,1.45462575940567,5.59175283654366,9.36898550436951,5.86450779077674,1.02182822083437,1.91704199209472,0.599902730993408,0.889491589511453,5.24267237916879,3.66000482254901,6.03140890141749,5.38855392596057,5.8814555185976,4.77912502486988,6.65189178577806,2.03678727700633,1.49288364732112,2.0217820674694,2.10441855886474,5.85541993332167,7.81667155073808,6.30217454318722,4.67184935290717,5.91917542616552,8.19927809823039,6.09061209638237,3.10444044886819,4.74249584452253,5.10586416453112,4.92663147659057,1.53437012699302,3.05851974148158,3.1342694986995,2.26360350048738,2.7864797354589,1.40442637462647,0.257347907114715,1.13665399758237,3.52113813310353,3.04883877975425,3.06105504483725,4.7348947117042,2.95146347621106,2.46827380619805,3.25547522650571,1.60964040839772,2.80236821681207,1.97471819896177,1.31333971263276,1.54030738137126,1.31579988682799,1.3173006917463,1.34206418760372,5.46753866266731,11.3195073617213,0.660837565967596,1.32225283331772,4.69234151177515,4.87697010906921,3.09281907173024,1.81515172161008,2.00140239460383,1.52180500890047,0.949058123089023,1.4822905925161,3.2673577144035,3.18330355265841,2.33956904542944,0.898819408654221,1.08069024937347,1.59313018603494,2.0863469104839,2.17072173958485,3.38123207019241,4.2766778847516,2.90928730751439,3.29638353484497,2.33975187359752,1.03327103585722,0.784993639206874,1.72756029490521,0.592905254174298,0.500535317148282,0.786235980452812,0.224862112384854,0.811440485554012,0.482354319504834,1.2731292589071,0.287696137450811,0.972811360650212,0.823684239564244,0,1.48856379067401,0.936113019343682,1.76805214562978,0.896987067609561,0,1.47802552133284,3.7898282354097,2.44447464663039,4.41337223015489,2.81628297946203,1.50755631697634,1.90434912708811,2.14647012643579,2.67979744980525,2.43611158613652,2.07291199254733,1.47476983244164,2.07221978239075,1.44649058581512,0,0,0.491764273019036,1.37968373152366,3.37156238974363,5.15731421005694,0.491804836130026,0.504941854408746,0.315508219416257,2.73307121007647,2.15423397732799,1.43381278771531,3.11918143715352,3.11384183867716,1.21443210502468,2.33804686329049,2.76701444562566,3.53453448063988,1.56134093729095,0.712262414669021,2.60619134965722,2.47455184458803,0,2.18502572539483,1.209294227859,0.754420319023592,0,0.307435147943927,1.03371317267288,0.363533729477506,3.20847640546249,1.58018378967908,1.05418608574999,0,3.06395645178409,5.221771726908,1.81102157295856,1.50035924522115,3.54680467284547,3.0322698992352,3.1264313914403,1.8267896946876,1.40803024838226,0.63549621259146,1.10264199027481,2.14352128823924,2.42196640043858,2.0506394475573,2.74556391207214,2.9545361954111,1.1659233465194,3.70850604021019,0.683483523191411,0.412773735926445,1.66675074632741,0.941842285023455,1.91371918809435,1.37266903923914,3.0596117398894,2.51912614182584,4.14599921413271,1.90934123603023,3.79603192297362,3.65975040828328,1.94409613479242,2.50905955217362,2.62035076495413,2.02296519577231,2.97552440611209,3.14107130380836,1.42576470620972,1.24267862617385,2.81846469342095,2.54178128274764,0.66183396182839,0.972255941720238,1.29159823477731,1.68956125490778,2.8165737274981,1.95306577265925,1.67774951081137,5.07326653734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| |||
|short_description=p2@Ptbp2 | |||
}} |
Revision as of 22:50, 5 August 2015
Short description: | p2@Ptbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptbp2_5end |
Coexpression cluster: | NA |
Association with transcript: | 126bp_to_ENSMUST00000029780, NM_019550, uc008rdj.2, uc008rdk.2, uc008rdl.2, uc008rdm.2_5end |
EntrezGene: | 56195 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.18e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.18e-10 | 23 |
neuron | 7.89e-09 | 33 |
neuronal stem cell | 7.89e-09 | 33 |
neuroblast | 7.89e-09 | 33 |
electrically signaling cell | 7.89e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.22e-16 | 64 |
neural plate | 3.22e-16 | 64 |
presumptive neural plate | 3.22e-16 | 64 |
ecto-epithelium | 7.91e-16 | 73 |
ectoderm-derived structure | 4.60e-14 | 95 |
ectoderm | 4.60e-14 | 95 |
presumptive ectoderm | 4.60e-14 | 95 |
pre-chordal neural plate | 4.63e-14 | 49 |
structure with developmental contribution from neural crest | 1.08e-13 | 92 |
regional part of nervous system | 1.29e-13 | 54 |
central nervous system | 7.59e-13 | 73 |
neural tube | 1.25e-12 | 52 |
neural rod | 1.25e-12 | 52 |
future spinal cord | 1.25e-12 | 52 |
neural keel | 1.25e-12 | 52 |
nervous system | 7.05e-12 | 75 |
brain | 1.08e-10 | 47 |
future brain | 1.08e-10 | 47 |
regional part of brain | 2.24e-10 | 46 |
anterior neural tube | 6.45e-10 | 40 |
gray matter | 1.74e-09 | 34 |
regional part of forebrain | 1.99e-09 | 39 |
forebrain | 1.99e-09 | 39 |
future forebrain | 1.99e-09 | 39 |
brain grey matter | 1.18e-07 | 29 |
regional part of telencephalon | 1.18e-07 | 29 |
telencephalon | 1.18e-07 | 29 |