FFCP PHASE1:Mm9::chr2:60221365..60221371,-: Difference between revisions
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{{FFCP|EntrezGene=17076|HGNC=|UniProt=A2AW86|association_with_transcript=-5bp_to_ENSMUST00000112533_5end|description=CAGE_peak_3_at_Ly75_5end|id=chr2:60221365..60221371,-|ontology_enrichment_celltype=CL:0000542!9.00e-08!13;CL:0000051!9.00e-08!13;CL:0000791!1.07e-07!9;CL:0000789!1.07e-07!9;CL:0002420!1.07e-07!9;CL:0002419!1.07e-07!9;CL:0000790!1.07e-07!9;CL:0000838!1.69e-07!12;CL:0000084!7.77e-07!11;CL:0000827!7.77e-07!11;CL:0000624!8.97e-07!8|ontology_enrichment_celltype_v019_2=CL:0000625,6.50e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.62e-08,3;DOID:4045,4.62e-08,3|ontology_enrichment_uberon=UBERON:0002370!2.17e-12!23;UBERON:0000974!2.17e-12!23;UBERON:0004807!2.17e-12!23;UBERON:0005058!2.17e-12!23;UBERON:0003351!2.17e-12!23;UBERON:0009113!2.17e-12!23;UBERON:0003295!2.17e-12!23;UBERON:0009722!2.17e-12!23;UBERON:0005562!2.17e-12!23;UBERON:0007690!2.17e-12!23;UBERON:0006562!1.59e-11!24;UBERON:0003408!1.59e-11!24;UBERON:0001557!1.59e-11!24;UBERON:0001042!1.59e-11!24;UBERON:0008814!1.59e-11!24;UBERON:0009145!1.59e-11!24;UBERON:0004177!2.88e-11!29;UBERON:0000072!2.45e-10!27;UBERON:0000065!4.23e-09!41;UBERON:0000063!6.78e-09!35;UBERON:0003929!8.00e-09!55;UBERON:0005911!8.32e-09!69;UBERON:0001004!1.19e-08!42;UBERON:0000490!6.37e-08!66;UBERON:0002193!1.33e-07!48;UBERON:0004119!3.92e-07!130;UBERON:0000925!3.92e-07!130;UBERON:0006595!3.92e-07!130;UBERON:0001007!5.44e-07!128;UBERON:0001555!5.44e-07!128;UBERON:0007026!5.44e-07!128;UBERON:0005057!5.85e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000490,5.64e-08,66;UBERON:0000029,9.48e-07,1;UBERON:0001097,9.48e-07,1;UBERON:0003968,9.48e-07,1;UBERON:0001467,9.48e-07,1|phase1_expression=0,1.04692622291808,0,0.90739263392049,1.00179145989269,0.16787927191189,0,1.03298658753261,0.281577444303333,0.70219357896598,0.34243593645101,0.638177271962691,0.684802919724823,1.31130603628496,0,0,0,0.630924330716475,0.274228867211478,0.84877930359606,0.0850432901510698,0.198581902401771,0,0.159992422793407,0.22940928106717,0.57423196411502,0.86152399231815,0.430942465371778,0,0.504060259519861,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,3.34825304589526,0,1.0470474879476,1.76469446409304,1.36609096991689,1.45653105909346,0.125896817975577,0.101376931219515,0,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0.671130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0.482354319504834,0,0,0,1.09824565275233,1.43768206527355,0.744281895337007,0.624075346229121,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.900305470156551,0.129358683782755,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0.291480836629851,0,0.341741761595705,0,0,0,0.27338845544205,0.228778173206523,0.169978429993855,0.279902904647316,0.414599921413271,0,0.790839983952838,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0,0,0,0.13020438484395,0.314578033277133,0,0,1.26404448251271,0.608175645870493,0.616265742988964,0.649604114888975,0.895133478337407,0.993406773906324,0.600977247599844,0.295379054349154,1.00966449948148,1.295515713135,0.907435666231565,0.974578807397524,0.673482891482306,1.8700304349051,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.237270036248348,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p3@Ly75}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17076 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AW86 | |||
|association_with_transcript=-5bp_to_ENSMUST00000112533_5end | |||
|cluster_id=chr2:60221365..60221371,- | |||
|description=CAGE_peak_3_at_Ly75_5end | |||
|id=chr2:60221365..60221371,- | |||
|ontology_enrichment_celltype=CL:0000542!9.00e-08!13;CL:0000051!9.00e-08!13;CL:0000791!1.07e-07!9;CL:0000789!1.07e-07!9;CL:0002420!1.07e-07!9;CL:0002419!1.07e-07!9;CL:0000790!1.07e-07!9;CL:0000838!1.69e-07!12;CL:0000084!7.77e-07!11;CL:0000827!7.77e-07!11;CL:0000624!8.97e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.50e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.62e-08,3;DOID:4045,4.62e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.17e-12!23;UBERON:0000974!2.17e-12!23;UBERON:0004807!2.17e-12!23;UBERON:0005058!2.17e-12!23;UBERON:0003351!2.17e-12!23;UBERON:0009113!2.17e-12!23;UBERON:0003295!2.17e-12!23;UBERON:0009722!2.17e-12!23;UBERON:0005562!2.17e-12!23;UBERON:0007690!2.17e-12!23;UBERON:0006562!1.59e-11!24;UBERON:0003408!1.59e-11!24;UBERON:0001557!1.59e-11!24;UBERON:0001042!1.59e-11!24;UBERON:0008814!1.59e-11!24;UBERON:0009145!1.59e-11!24;UBERON:0004177!2.88e-11!29;UBERON:0000072!2.45e-10!27;UBERON:0000065!4.23e-09!41;UBERON:0000063!6.78e-09!35;UBERON:0003929!8.00e-09!55;UBERON:0005911!8.32e-09!69;UBERON:0001004!1.19e-08!42;UBERON:0000490!6.37e-08!66;UBERON:0002193!1.33e-07!48;UBERON:0004119!3.92e-07!130;UBERON:0000925!3.92e-07!130;UBERON:0006595!3.92e-07!130;UBERON:0001007!5.44e-07!128;UBERON:0001555!5.44e-07!128;UBERON:0007026!5.44e-07!128;UBERON:0005057!5.85e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,5.64e-08,66;UBERON:0000029,9.48e-07,1;UBERON:0001097,9.48e-07,1;UBERON:0003968,9.48e-07,1;UBERON:0001467,9.48e-07,1 | |||
|phase1_expression=0,1.04692622291808,0,0.90739263392049,1.00179145989269,0.16787927191189,0,1.03298658753261,0.281577444303333,0.70219357896598,0.34243593645101,0.638177271962691,0.684802919724823,1.31130603628496,0,0,0,0.630924330716475,0.274228867211478,0.84877930359606,0.0850432901510698,0.198581902401771,0,0.159992422793407,0.22940928106717,0.57423196411502,0.86152399231815,0.430942465371778,0,0.504060259519861,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,3.34825304589526,0,1.0470474879476,1.76469446409304,1.36609096991689,1.45653105909346,0.125896817975577,0.101376931219515,0,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0.671130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0.482354319504834,0,0,0,1.09824565275233,1.43768206527355,0.744281895337007,0.624075346229121,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.900305470156551,0.129358683782755,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0.291480836629851,0,0.341741761595705,0,0,0,0.27338845544205,0.228778173206523,0.169978429993855,0.279902904647316,0.414599921413271,0,0.790839983952838,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0,0,0,0.13020438484395,0.314578033277133,0,0,1.26404448251271,0.608175645870493,0.616265742988964,0.649604114888975,0.895133478337407,0.993406773906324,0.600977247599844,0.295379054349154,1.00966449948148,1.295515713135,0.907435666231565,0.974578807397524,0.673482891482306,1.8700304349051,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.237270036248348,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p3@Ly75 | |||
}} |
Revision as of 07:19, 5 August 2015
Short description: | p3@Ly75 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ly75_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENSMUST00000112533_5end |
EntrezGene: | 17076 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 5.64e-08 | 66 |
lymph node | 9.48e-07 | 1 |
axillary lymph node | 9.48e-07 | 1 |
peripheral lymph node | 9.48e-07 | 1 |
shoulder | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.62e-08 | 3 |
muscle cancer | 4.62e-08 | 3 |