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FFCP PHASE1:Mm9::chr2:52531638..52531665,-: Difference between revisions

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{{FFCP|EntrezGene=12298|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=0bp_to_ENSMUST00000148837_5end|description=CAGE_peak_3_at_Cacnb4_5end|id=chr2:52531638..52531665,-|ontology_enrichment_celltype=CL:0000117!2.18e-07!23;CL:0000337!2.18e-07!23;CL:0000221!3.82e-07!44;CL:0000133!3.82e-07!44;CL:0002319!4.17e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.49e-07,23;CL:0000337,1.49e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.45e-20!75;UBERON:0001016!1.45e-20!75;UBERON:0001017!2.28e-20!73;UBERON:0005743!2.28e-20!73;UBERON:0001049!4.19e-20!52;UBERON:0005068!4.19e-20!52;UBERON:0006241!4.19e-20!52;UBERON:0007135!4.19e-20!52;UBERON:0000955!1.68e-19!50;UBERON:0006238!1.68e-19!50;UBERON:0002616!8.27e-19!49;UBERON:0000033!2.89e-18!63;UBERON:0004121!3.31e-18!102;UBERON:0000924!3.31e-18!102;UBERON:0006601!3.31e-18!102;UBERON:0002346!2.15e-17!71;UBERON:0003075!2.15e-17!71;UBERON:0007284!2.15e-17!71;UBERON:0002020!1.51e-15!34;UBERON:0003080!1.77e-13!40;UBERON:0002791!4.75e-13!29;UBERON:0003528!4.75e-13!29;UBERON:0001893!4.75e-13!29;UBERON:0002780!7.12e-13!39;UBERON:0001890!7.12e-13!39;UBERON:0006240!7.12e-13!39;UBERON:0003056!2.88e-12!49;UBERON:0000956!7.06e-10!21;UBERON:0001869!7.06e-10!21;UBERON:0000203!7.06e-10!21;UBERON:0002619!9.34e-09!17;UBERON:0002021!2.14e-08!10;UBERON:0000411!2.14e-08!10;UBERON:0001950!2.14e-08!10;UBERON:0000025!1.14e-07!114;UBERON:0003076!1.30e-07!12;UBERON:0003057!1.30e-07!12;UBERON:0004111!1.52e-07!122;UBERON:0007811!5.85e-07!86;UBERON:0000489!7.40e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.16e-28,54;UBERON:0001049,1.60e-25,52;UBERON:0005068,1.60e-25,52;UBERON:0006241,1.60e-25,52;UBERON:0007135,1.60e-25,52;UBERON:0001017,2.20e-23,73;UBERON:0002020,7.10e-23,34;UBERON:0001016,2.18e-22,75;UBERON:0000955,3.14e-21,47;UBERON:0006238,3.14e-21,47;UBERON:0002616,3.87e-20,46;UBERON:0002346,1.64e-19,64;UBERON:0003075,1.64e-19,64;UBERON:0007284,1.64e-19,64;UBERON:0004121,1.01e-18,95;UBERON:0000924,1.01e-18,95;UBERON:0006601,1.01e-18,95;UBERON:0003528,1.92e-18,29;UBERON:0002791,1.92e-18,29;UBERON:0001893,1.92e-18,29;UBERON:0010371,8.84e-18,73;UBERON:0003080,9.44e-16,40;UBERON:0002780,8.73e-15,39;UBERON:0001890,8.73e-15,39;UBERON:0006240,8.73e-15,39;UBERON:0002021,4.97e-14,10;UBERON:0000411,4.97e-14,10;UBERON:0001950,4.97e-14,10;UBERON:0002619,1.11e-13,17;UBERON:0000956,1.71e-13,21;UBERON:0001869,1.71e-13,21;UBERON:0000203,1.71e-13,21;UBERON:0003056,3.04e-12,49;UBERON:0003076,5.35e-11,12;UBERON:0003057,5.35e-11,12;UBERON:0010314,4.65e-10,92;UBERON:0000025,1.34e-09,114;UBERON:0004111,6.71e-09,122;UBERON:0000489,1.41e-08,21;UBERON:0002240,9.60e-07,6;UBERON:0005174,9.60e-07,6;UBERON:0001137,9.60e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0.183546752161682,2.34717403304412,0.872100625521786,1.5378032791413,8.74934545834275,0.55994568650145,1.43752564364972,0,0,0,0,0.573066879877513,0,1.01158230429799,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,1.53687322128622,0.622137673850866,1.08004750665353,0.630974884054146,1.71390590642282,2.65042249141936,0.489963196859816,0.383381884072945,0,8.8092704799511,12.3856717942632,12.595735727012,0.395658863190582,1.28082701043374,1.04182674111352,2.79182999001381,2.8138130501584,2.29197371665215,3.24091444021034,2.13557521198654,1.86399445825301,0.681535739998656,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.91347103775248,0,0.742210695324124,0.520455980298408,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0.494389935468748,0.144599356919912,0,0,0.220841518460394,0,0,29.2780797011547,34.3492599174066,0.255457055208591,0,0,0,10.4853447583376,9.60751265919116,2.38743269014442,24.509229147111,24.8043993610421,13.714010940931,14.4394724130304,1.83310854930569,0.622034853050465,1.76905930903572,0.631325567659422,0.130120442962704,0,0,0.452114453507145,0.816437989815934,0.512454881139399,0.281105173679186,1.03481348295606,0,0.378212160335639,0.175951124163949,1.09597866213787,1.66828349535359,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,8.83217783969334,1.85228302282712,0,0,0.639864751605702,0.464473343720877,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0.494096864172033,0,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0.948339504765408,0.456994050438915,1.1270773567308,1.22190796707189,0.775809948670503,1.33258057791605,1.45444035385792,3.98547399544926,6.43694784149637,3.70191491765402,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0,0.169745085775188,0.234690248288502,1.34005005953453,1.42826184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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12298
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000148837_5end
|cluster_id=chr2:52531638..52531665,-
|description=CAGE_peak_3_at_Cacnb4_5end
|id=chr2:52531638..52531665,-
|ontology_enrichment_celltype=CL:0000117!2.18e-07!23;CL:0000337!2.18e-07!23;CL:0000221!3.82e-07!44;CL:0000133!3.82e-07!44;CL:0002319!4.17e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.49e-07,23;CL:0000337,1.49e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.45e-20!75;UBERON:0001016!1.45e-20!75;UBERON:0001017!2.28e-20!73;UBERON:0005743!2.28e-20!73;UBERON:0001049!4.19e-20!52;UBERON:0005068!4.19e-20!52;UBERON:0006241!4.19e-20!52;UBERON:0007135!4.19e-20!52;UBERON:0000955!1.68e-19!50;UBERON:0006238!1.68e-19!50;UBERON:0002616!8.27e-19!49;UBERON:0000033!2.89e-18!63;UBERON:0004121!3.31e-18!102;UBERON:0000924!3.31e-18!102;UBERON:0006601!3.31e-18!102;UBERON:0002346!2.15e-17!71;UBERON:0003075!2.15e-17!71;UBERON:0007284!2.15e-17!71;UBERON:0002020!1.51e-15!34;UBERON:0003080!1.77e-13!40;UBERON:0002791!4.75e-13!29;UBERON:0003528!4.75e-13!29;UBERON:0001893!4.75e-13!29;UBERON:0002780!7.12e-13!39;UBERON:0001890!7.12e-13!39;UBERON:0006240!7.12e-13!39;UBERON:0003056!2.88e-12!49;UBERON:0000956!7.06e-10!21;UBERON:0001869!7.06e-10!21;UBERON:0000203!7.06e-10!21;UBERON:0002619!9.34e-09!17;UBERON:0002021!2.14e-08!10;UBERON:0000411!2.14e-08!10;UBERON:0001950!2.14e-08!10;UBERON:0000025!1.14e-07!114;UBERON:0003076!1.30e-07!12;UBERON:0003057!1.30e-07!12;UBERON:0004111!1.52e-07!122;UBERON:0007811!5.85e-07!86;UBERON:0000489!7.40e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.16e-28,54;UBERON:0001049,1.60e-25,52;UBERON:0005068,1.60e-25,52;UBERON:0006241,1.60e-25,52;UBERON:0007135,1.60e-25,52;UBERON:0001017,2.20e-23,73;UBERON:0002020,7.10e-23,34;UBERON:0001016,2.18e-22,75;UBERON:0000955,3.14e-21,47;UBERON:0006238,3.14e-21,47;UBERON:0002616,3.87e-20,46;UBERON:0002346,1.64e-19,64;UBERON:0003075,1.64e-19,64;UBERON:0007284,1.64e-19,64;UBERON:0004121,1.01e-18,95;UBERON:0000924,1.01e-18,95;UBERON:0006601,1.01e-18,95;UBERON:0003528,1.92e-18,29;UBERON:0002791,1.92e-18,29;UBERON:0001893,1.92e-18,29;UBERON:0010371,8.84e-18,73;UBERON:0003080,9.44e-16,40;UBERON:0002780,8.73e-15,39;UBERON:0001890,8.73e-15,39;UBERON:0006240,8.73e-15,39;UBERON:0002021,4.97e-14,10;UBERON:0000411,4.97e-14,10;UBERON:0001950,4.97e-14,10;UBERON:0002619,1.11e-13,17;UBERON:0000956,1.71e-13,21;UBERON:0001869,1.71e-13,21;UBERON:0000203,1.71e-13,21;UBERON:0003056,3.04e-12,49;UBERON:0003076,5.35e-11,12;UBERON:0003057,5.35e-11,12;UBERON:0010314,4.65e-10,92;UBERON:0000025,1.34e-09,114;UBERON:0004111,6.71e-09,122;UBERON:0000489,1.41e-08,21;UBERON:0002240,9.60e-07,6;UBERON:0005174,9.60e-07,6;UBERON:0001137,9.60e-07,6
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0.183546752161682,2.34717403304412,0.872100625521786,1.5378032791413,8.74934545834275,0.55994568650145,1.43752564364972,0,0,0,0,0.573066879877513,0,1.01158230429799,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,1.53687322128622,0.622137673850866,1.08004750665353,0.630974884054146,1.71390590642282,2.65042249141936,0.489963196859816,0.383381884072945,0,8.8092704799511,12.3856717942632,12.595735727012,0.395658863190582,1.28082701043374,1.04182674111352,2.79182999001381,2.8138130501584,2.29197371665215,3.24091444021034,2.13557521198654,1.86399445825301,0.681535739998656,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.91347103775248,0,0.742210695324124,0.520455980298408,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0.494389935468748,0.144599356919912,0,0,0.220841518460394,0,0,29.2780797011547,34.3492599174066,0.255457055208591,0,0,0,10.4853447583376,9.60751265919116,2.38743269014442,24.509229147111,24.8043993610421,13.714010940931,14.4394724130304,1.83310854930569,0.622034853050465,1.76905930903572,0.631325567659422,0.130120442962704,0,0,0.452114453507145,0.816437989815934,0.512454881139399,0.281105173679186,1.03481348295606,0,0.378212160335639,0.175951124163949,1.09597866213787,1.66828349535359,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,8.83217783969334,1.85228302282712,0,0,0.639864751605702,0.464473343720877,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0.494096864172033,0,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0.948339504765408,0.456994050438915,1.1270773567308,1.22190796707189,0.775809948670503,1.33258057791605,1.45444035385792,3.98547399544926,6.43694784149637,3.70191491765402,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0,0.169745085775188,0.234690248288502,1.34005005953453,1.42826184531608,1.36593553500459,0.788175720530955,1.32878813789265,1.2756381492599,0.491589944147214,0.345369963731791,0.144649058581512,0,0,1.47529281905711,1.93155722413313,4.17431533968259,4.33683240391152,0,0.252470927204373,0.631016438832513,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0,0,0.395287777946524,17.6726724031994,0.709700426041343,0.35613120733451,1.79175655288934,0.824850614862677,0,0.242780636154981,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.886701168211368,0.535106452806212,0.329098041204242,0.304464949114599,0.23467170806371,0,0.441056796109924,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.874442509889552,5.37733375830478,0,0.619160603889667,0,0.188368457004691,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.432021363287205,0.836353184057875,0.655087691238533,0.539457385539283,0.165306911450672,0.523511883968059,0,6.21339313086926,0,0.448549638131936,0.330916980914195,2.13896307178452,2.0665571756437,2.70329800785245,3.28600268208111,2.0832701575032,2.83120229949419,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0.214368379079066,0,28.2375921308533,18.8733346967943,18.9055519435001,21.4816477929609,22.6077231524312,13.5970901530146,18.2256075062588,20.2644541450899,22.6571204492102,18.6393712230655,0.31136204275253,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0,0.618105171716683,1.28367683836726,0.252697211763798,1.77435509923168,0.754505365544305,0.749132059759059,0.704276676453562,0.746661096422973,0.952587382566147,1.0429589335037,0.38581844092741,0.824171801606613,0.147198920134397,1.02860775715625,0.532427418478012,0.715308569841963,1.45346416632329,0.376437521661322,0.507687647350059,0.548783918618318,0.263069711437843,0.679020569229309,1.68342681497322,1.18635018124174,0.886540341380071,0,0.619747364743864,0.385813221962283,1.24905288968973,0.935726433781634,0.859484216193193,0.191288332068843,0.441182838239031,0.695603506861264
|short_description=p3@Cacnb4
}}

Revision as of 06:01, 5 August 2015

Short description:p3@Cacnb4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cacnb4_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_ENSMUST00000148837_5end
EntrezGene:12298
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cacnb4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B229.28
cerebellum, neonate N30.CNhs11135.1395-42I234.35
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.49
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D524.51
cortex, neonate N30.CNhs11107.1392-42F224.80
diencephalon, adult.CNhs10482.20-12F213.71
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F36.44
kidney, neonate N30.CNhs11203.1385-42H13.70
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I917.67
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.24
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.64
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.49e-0723
neuroblast (sensu Vertebrata)1.49e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.16e-2854
neural tube1.60e-2552
neural rod1.60e-2552
future spinal cord1.60e-2552
neural keel1.60e-2552
central nervous system2.20e-2373
gray matter7.10e-2334
nervous system2.18e-2275
brain3.14e-2147
future brain3.14e-2147
regional part of brain3.87e-2046
neurectoderm1.64e-1964
neural plate1.64e-1964
presumptive neural plate1.64e-1964
ectoderm-derived structure1.01e-1895
ectoderm1.01e-1895
presumptive ectoderm1.01e-1895
brain grey matter1.92e-1829
regional part of telencephalon1.92e-1829
telencephalon1.92e-1829
ecto-epithelium8.84e-1873
anterior neural tube9.44e-1640
regional part of forebrain8.73e-1539
forebrain8.73e-1539
future forebrain8.73e-1539
occipital lobe4.97e-1410
visual cortex4.97e-1410
neocortex4.97e-1410
regional part of cerebral cortex1.11e-1317
cerebral cortex1.71e-1321
cerebral hemisphere1.71e-1321
pallium1.71e-1321
pre-chordal neural plate3.04e-1249
posterior neural tube5.35e-1112
chordal neural plate5.35e-1112
structure with developmental contribution from neural crest4.65e-1092
tube1.34e-09114
anatomical conduit6.71e-09122
cavitated compound organ1.41e-0821
spinal cord9.60e-076
dorsal region element9.60e-076
dorsum9.60e-076
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