FFCP PHASE1:Mm9::chr2:38860646..38860665,-: Difference between revisions
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{{FFCP|EntrezGene=66489|HGNC=|MCL_coexpression_id=653|UniProt=Q6ZWV7|association_with_transcript=0bp_to_NM_025592,uc008jnz.1_5end|description=CAGE_peak_1_at_Rpl35_5end|id=chr2:38860646..38860665,-|ontology_enrichment_celltype=CL:0000219!1.08e-09!54;CL:0002320!1.45e-09!46;CL:0000134!1.45e-09!46;CL:0000988!1.56e-09!32;CL:0002032!1.56e-09!32;CL:0000037!1.56e-09!32;CL:0000566!1.56e-09!32;CL:0000837!1.56e-09!32;CL:0000034!5.98e-08!97;CL:0000063!2.54e-07!66;CL:0000542!9.41e-07!13;CL:0000051!9.41e-07!13|ontology_enrichment_celltype_v019_2=CL:0000219,1.08e-09,54;CL:0002320,1.45e-09,46;CL:0000134,1.45e-09,46;CL:0000988,1.56e-09,32;CL:0002032,1.56e-09,32;CL:0000037,1.56e-09,32;CL:0000837,1.56e-09,32;CL:0000034,5.98e-08,97;CL:0000542,9.41e-07,13;CL:0000051,9.41e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.45e-09!46;UBERON:0002075!6.03e-07!19|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.45e-09,46;UBERON:0002075,6.03e-07,19|phase1_expression=242.465354516658,87.2438519098403,85.0848577658432,27.2217790176147,46.0824071550639,145.71920801952,149.512089981136,264.057196438023,475.161937261875,435.125954432586,399.96517377478,370.860767169319,307.476510956446,253.519167015092,259.159394692586,246.209925146028,256.039647394902,269.246958133256,252.564786701771,277.126442624114,99.2455196062984,307.702657771544,286.013769107134,160.312407638994,165.633500930497,142.98375906464,196.427470248538,183.366019015692,138.33704936424,174.152819664112,217.295900442199,134.626502773442,131.008799755513,269.418857726246,429.811210189897,416.417786623023,399.355260849194,143.137817712022,242.213956802378,185.850929110698,80.587713860249,88.7959130445979,92.2469670759192,250.156977317472,243.000504133176,255.313532256899,579.751986161897,181.614955264912,130.273906361542,123.851845710319,358.225252939303,192.628436249062,246.472648298815,260.405008982073,295.762543245368,307.425026062957,319.198252091775,207.300181095532,210.611435754841,199.958590164828,195.220072279903,529.614003624053,360.164392425011,273.569514053545,376.758084138017,343.872375633912,256.757294714273,210.16741301089,180.316235804443,226.80997639724,218.527634844086,166.820174891821,180.228729416517,210.439193051291,258.68692627822,186.601413681834,143.150645299205,94.6163175211241,102.762770748427,187.146642289145,230.731837165277,212.011741816601,125.632349550621,140.69065250792,110.014738399303,129.047320437466,135.680211801545,158.625928397331,244.292699692852,227.772682161852,94.2059588280453,113.575951761543,176.112575430307,155.434519191691,89.0193691903307,81.0928665646177,115.304868928168,360.800992897748,479.564964496896,412.347283453567,207.88488759038,184.790127476618,94.2779386914589,113.770672504533,326.468489844911,284.523128928536,287.137884768397,118.865418787541,121.182929546876,99.1593488953029,218.244541071799,255.751001782199,196.484403662162,191.719198782936,144.163754948374,75.525621389135,96.9004273518746,98.0383639917001,84.9226129871879,160.634481997777,130.738178928553,178.918968406897,106.24330389433,54.7500090411593,43.7743617240121,158.127917174118,410.366801432777,643.695630355926,509.932821244209,110.994863798974,100.192632017279,193.00508484536,94.3866058644061,58.3031242713154,102.231717923304,77.7135650094559,206.22471179689,157.374817821768,217.847017769828,107.114904646215,243.064987454331,214.268761331997,210.312567612648,209.479696791644,128.929165891766,135.031861180232,122.842960897804,110.725042676299,228.070936522947,155.066985737612,169.792834818211,270.2683380832,247.462051810782,200.593247916768,250.436860008467,230.481680975815,530.873169608805,427.969569531771,281.606027901032,198.426490089011,223.034283042022,215.534287568835,158.618972842091,183.974556683823,197.307637382957,178.121001678812,146.745550565592,158.450569592249,139.217633026804,156.287425803299,110.821062649185,119.445389726497,129.973668252302,126.154033634749,82.8542397342661,178.745311702817,52.2061677114401,127.465173131828,240.375858353209,238.50706200067,188.661963375545,189.784196670565,211.926275784161,164.164715335139,118.632265386128,176.392580509416,154.822488620966,147.426745782493,136.474860983384,109.655967855815,122.334136229077,132.030664167645,485.739494340842,238.779391354333,158.917907299043,213.83389423758,225.954647550284,162.154015586417,103.202028586788,100.817731070068,97.3392112616524,94.8924190558646,104.647777361764,240.590642442608,237.050148106523,257.691980793042,230.854818140116,233.459490640339,285.435579846972,258.351131430828,267.036718498483,218.276323484525,51.7565543498476,113.130848091225,136.672500824178,88.6551861594362,115.35253689459,91.6642690590398,115.101237473795,237.243247536647,182.846703567953,258.352020549836,249.006353434101,198.494915068552,220.190367819563,134.837350669739,119.802709520705,133.986137237509,89.1352156795353,116.50681676289,103.438304137671,100.820393831314,134.204242705952,128.361741381215,188.345716566291,223.5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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66489 | |||
|HGNC= | |||
|MCL_coexpression_id=653 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6ZWV7 | |||
|association_with_transcript=0bp_to_NM_025592,uc008jnz.1_5end | |||
|cluster_id=chr2:38860646..38860665,- | |||
|description=CAGE_peak_1_at_Rpl35_5end | |||
|id=chr2:38860646..38860665,- | |||
|ontology_enrichment_celltype=CL:0000219!1.08e-09!54;CL:0002320!1.45e-09!46;CL:0000134!1.45e-09!46;CL:0000988!1.56e-09!32;CL:0002032!1.56e-09!32;CL:0000037!1.56e-09!32;CL:0000566!1.56e-09!32;CL:0000837!1.56e-09!32;CL:0000034!5.98e-08!97;CL:0000063!2.54e-07!66;CL:0000542!9.41e-07!13;CL:0000051!9.41e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.08e-09,54;CL:0002320,1.45e-09,46;CL:0000134,1.45e-09,46;CL:0000988,1.56e-09,32;CL:0002032,1.56e-09,32;CL:0000037,1.56e-09,32;CL:0000837,1.56e-09,32;CL:0000034,5.98e-08,97;CL:0000542,9.41e-07,13;CL:0000051,9.41e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.45e-09!46;UBERON:0002075!6.03e-07!19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.45e-09,46;UBERON:0002075,6.03e-07,19 | |||
|phase1_expression=242.465354516658,87.2438519098403,85.0848577658432,27.2217790176147,46.0824071550639,145.71920801952,149.512089981136,264.057196438023,475.161937261875,435.125954432586,399.96517377478,370.860767169319,307.476510956446,253.519167015092,259.159394692586,246.209925146028,256.039647394902,269.246958133256,252.564786701771,277.126442624114,99.2455196062984,307.702657771544,286.013769107134,160.312407638994,165.633500930497,142.98375906464,196.427470248538,183.366019015692,138.33704936424,174.152819664112,217.295900442199,134.626502773442,131.008799755513,269.418857726246,429.811210189897,416.417786623023,399.355260849194,143.137817712022,242.213956802378,185.850929110698,80.587713860249,88.7959130445979,92.2469670759192,250.156977317472,243.000504133176,255.313532256899,579.751986161897,181.614955264912,130.273906361542,123.851845710319,358.225252939303,192.628436249062,246.472648298815,260.405008982073,295.762543245368,307.425026062957,319.198252091775,207.300181095532,210.611435754841,199.958590164828,195.220072279903,529.614003624053,360.164392425011,273.569514053545,376.758084138017,343.872375633912,256.757294714273,210.16741301089,180.316235804443,226.80997639724,218.527634844086,166.820174891821,180.228729416517,210.439193051291,258.68692627822,186.601413681834,143.150645299205,94.6163175211241,102.762770748427,187.146642289145,230.731837165277,212.011741816601,125.632349550621,140.69065250792,110.014738399303,129.047320437466,135.680211801545,158.625928397331,244.292699692852,227.772682161852,94.2059588280453,113.575951761543,176.112575430307,155.434519191691,89.0193691903307,81.0928665646177,115.304868928168,360.800992897748,479.564964496896,412.347283453567,207.88488759038,184.790127476618,94.2779386914589,113.770672504533,326.468489844911,284.523128928536,287.137884768397,118.865418787541,121.182929546876,99.1593488953029,218.244541071799,255.751001782199,196.484403662162,191.719198782936,144.163754948374,75.525621389135,96.9004273518746,98.0383639917001,84.9226129871879,160.634481997777,130.738178928553,178.918968406897,106.24330389433,54.7500090411593,43.7743617240121,158.127917174118,410.366801432777,643.695630355926,509.932821244209,110.994863798974,100.192632017279,193.00508484536,94.3866058644061,58.3031242713154,102.231717923304,77.7135650094559,206.22471179689,157.374817821768,217.847017769828,107.114904646215,243.064987454331,214.268761331997,210.312567612648,209.479696791644,128.929165891766,135.031861180232,122.842960897804,110.725042676299,228.070936522947,155.066985737612,169.792834818211,270.2683380832,247.462051810782,200.593247916768,250.436860008467,230.481680975815,530.873169608805,427.969569531771,281.606027901032,198.426490089011,223.034283042022,215.534287568835,158.618972842091,183.974556683823,197.307637382957,178.121001678812,146.745550565592,158.450569592249,139.217633026804,156.287425803299,110.821062649185,119.445389726497,129.973668252302,126.154033634749,82.8542397342661,178.745311702817,52.2061677114401,127.465173131828,240.375858353209,238.50706200067,188.661963375545,189.784196670565,211.926275784161,164.164715335139,118.632265386128,176.392580509416,154.822488620966,147.426745782493,136.474860983384,109.655967855815,122.334136229077,132.030664167645,485.739494340842,238.779391354333,158.917907299043,213.83389423758,225.954647550284,162.154015586417,103.202028586788,100.817731070068,97.3392112616524,94.8924190558646,104.647777361764,240.590642442608,237.050148106523,257.691980793042,230.854818140116,233.459490640339,285.435579846972,258.351131430828,267.036718498483,218.276323484525,51.7565543498476,113.130848091225,136.672500824178,88.6551861594362,115.35253689459,91.6642690590398,115.101237473795,237.243247536647,182.846703567953,258.352020549836,249.006353434101,198.494915068552,220.190367819563,134.837350669739,119.802709520705,133.986137237509,89.1352156795353,116.50681676289,103.438304137671,100.820393831314,134.204242705952,128.361741381215,188.345716566291,223.508764506833,103.23402936215,86.9710714514148,564.919821768024,146.938079632945,155.545552172215,167.498221303258,113.958977400651,139.796746802243,131.896815056777,134.461352124695,144.517420497937,138.237020792051,114.633455604492,80.9729717382954,144.211126571601,295.945033294978,201.654055679727,148.473110675282,611.955087747229,299.591305015247,301.114262736892,466.23175715658,435.865593892021,377.222926527199,167.978390559344,253.019475716344,281.276431545545,343.531955876232,503.900948988494,468.235366346768,115.749465956288,218.053984871917,245.13470576832,191.831646353275,135.310598269055,178.547186419673,176.725648126678,167.45572201303,169.198301513935,138.326342274075,237.950141501304,161.093869123826,191.496810061344,160.432380308895,158.765217524172,137.550073986361,153.318920067301,91.4146738911813,233.92223581226,219.182853776942,233.715493540576,276.336526425882,221.034566224898,208.645693964349,385.171122366076,376.049552393669,353.65373296552,277.809149842398,207.04190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| |||
|short_description=p1@Rpl35 | |||
}} |
Revision as of 04:01, 5 August 2015
Short description: | p1@Rpl35 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rpl35_5end |
Coexpression cluster: | MCL_coexpression_mm9:653 |
Association with transcript: | 0bp_to_NM_025592, uc008jnz.1_5end |
EntrezGene: | 66489 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.08e-09 | 54 |
connective tissue cell | 1.45e-09 | 46 |
mesenchymal cell | 1.45e-09 | 46 |
hematopoietic cell | 1.56e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.56e-09 | 32 |
hematopoietic stem cell | 1.56e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.56e-09 | 32 |
stem cell | 5.98e-08 | 97 |
lymphocyte | 9.41e-07 | 13 |
common lymphoid progenitor | 9.41e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.45e-09 | 46 |
viscus | 6.03e-07 | 19 |