Personal tools

FFCP PHASE1:Mm9::chr2:28438531..28438540,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=70239|HGNC=|UniProt=|association_with_transcript=-23bp_to_ENSMUST00000139553_5end|description=CAGE_peak_5_at_Gtf3c5_5end|id=chr2:28438531..28438540,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.20e-08!50;UBERON:0006238!2.20e-08!50;UBERON:0001049!3.58e-08!52;UBERON:0005068!3.58e-08!52;UBERON:0006241!3.58e-08!52;UBERON:0007135!3.58e-08!52;UBERON:0002616!5.81e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.57e-11,54;UBERON:0001049,1.14e-09,52;UBERON:0005068,1.14e-09,52;UBERON:0006241,1.14e-09,52;UBERON:0007135,1.14e-09,52;UBERON:0001017,2.65e-09,73;UBERON:0003076,6.69e-09,12;UBERON:0003057,6.69e-09,12;UBERON:0001016,9.24e-09,75;UBERON:0000955,5.83e-08,47;UBERON:0006238,5.83e-08,47;UBERON:0004121,7.13e-08,95;UBERON:0000924,7.13e-08,95;UBERON:0006601,7.13e-08,95;UBERON:0002346,1.05e-07,64;UBERON:0003075,1.05e-07,64;UBERON:0007284,1.05e-07,64;UBERON:0002616,2.15e-07,46;UBERON:0010371,2.87e-07,73|phase1_expression=0.320297694209588,0.697950815278722,0,0.30246421130683,0.500895729946347,0.503637815735669,0.700837921786577,0.645616617207881,0.281577444303333,0.234064526321993,0.513653904676515,0.638177271962691,0.684802919724823,0.961624426608971,0.666219523631325,0.202475267389826,0,0.946386496074713,1.23402990245165,0,1.78590909317247,0.297872853602656,0.261199789138935,0.639969691173627,0.45881856213434,0,0.430761996159075,0.861884930743556,0.760093677825496,0.504060259519861,0.443461021310609,1.90509202037889,1.84519436275371,0,1.1554064790051,0.664938581433969,0.612508068787107,0,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0.125896817975577,0.811015449756117,0.183546752161682,3.9119567217402,1.09012578190223,0.659058548203415,0.972149495371417,0.55994568650145,0,0.335565212115473,0,0.336093799142464,0.514518872071894,0,0,0.606949382578793,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,1.53687322128622,0.207379224616955,0.405017814995072,1.05162480675691,1.42825492201902,1.10434270475807,0.122490799214954,0.958454710182364,0.919218786610021,2.20231761998777,3.06449611404451,2.15049146558741,1.58263545276233,0.731901148819277,2.08365348222704,1.3959149950069,3.37657566019008,3.51435969886663,0.589257170947335,1.56608848879013,1.4911955666024,0.605809546665472,0.604572480854284,0.869593466105033,0,0,1.07940638327563,0,0.448026887097336,0.561777680527007,1.02258193546835,0.519572009205738,0.35333957451034,0.845060518660083,0,0,14.2213340630666,0.649473123033642,0.760079596425296,0.505524445014783,0.79928715803342,1.55362730188303,0.742210695324124,0.693941307064543,0.304465478312141,0.691846491768175,0,0.587943535678524,0.376999773989026,0.741584903203122,1.3013942122792,0.884610551949874,0.323533699894818,0.662524555381181,0,1.86391761218122,3.22058876712702,2.09446706813455,0.510914110417183,1.31796636956512,0.599902730993408,0.635351135365324,4.19413790333504,3.20250421973039,1.50785222535437,1.39059456153821,0.511430914660661,2.0778804455956,0.811206315338788,0.305518091550949,0.622034853050465,0.505445516867349,1.68353484709179,0.260240885925407,0.689706313300419,0.180062129805349,0.60281927134286,0.476255494059295,0.2562274405697,0.0937017245597288,0.776110112217047,1.07783996466421,0.189106080167819,0.527853372491847,0.43839146485515,1.94633074457919,1.0447564995665,0.205782136407943,0.59710280045548,0.702213187313235,0.257347907114715,0.852490498186778,0.828503090142008,0.938104239924385,0.540186184383045,1.65721314909647,1.18058539048442,0.617068451549513,1.39520366850245,1.07309360559848,0.467061369468678,0.822799249567402,0.32833492815819,0.891756905004413,1.46199987425332,0.658650345873152,0.939444931322602,1.47202963994889,0.411618449517138,0.330418782983798,0.793351699990633,1.2797295032114,0.464473343720877,0.515469845288373,1.61346819698674,0.667134131534611,0.570676878337677,1.42358718463353,0,0,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,1.1948476395262,0.758671603812327,0.913988100877831,1.1270773567308,0.203651327845314,0.387904974335251,0.561086559122548,0.948548056863859,1.91893192373483,0.627994911365499,0.616985819609003,0.296452627087149,0.333690211432188,0.589676985339609,0,1.01430060694251,0.241177159752417,0.763877555344259,0,0.162135226775035,0,0,0,0,0,1.07638448113147,0.482443521363367,0.739012760666419,0.757965647081939,0.814824882210129,0.848725428875941,1.17345124144251,0.837531287209079,0.714130922658041,0.195133647857799,0.630540576424764,0.44292937929755,0.318909537314974,0.491589944147214,0.518054945597687,0.433947175744535,0,0.54390568381871,0.983528546038072,0.551873492609465,1.9266070798535,1.52375192569864,1.14754461763673,0.504941854408746,0.315508219416257,1.56175497718655,0.215423397732799,0,1.11399337041197,0.283076530788832,0,0.584511715822624,0.790575555893047,1.60660658210904,0.567760340833074,0,0.488660878060728,0.329940245945071,0,1.45668381692989,0.604647113929502,1.32023555829129,1.47650946440386,1.53717573971964,1.03371317267288,0.727067458955011,1.78248689192361,1.26414703174326,1.05418608574999,1.03135543248187,1.36175842301515,0.540183282093931,1.03486947026204,0.643011105094777,1.24138163549592,0.891844088010353,0.329098041204242,0.608929898229199,0.938686832254841,1.48282449604674,0.882113592219848,1.15420377059036,0.322928853391811,1.14594557363496,0.954978752025092,1.14898629821543,0.582961673259701,1.8542530201051,0.170870880797853,1.23832120777933,1.48155621895769,0.941842285023455,0.546776910884101,1.14389086603261,0.339956859987711,0.419854356970974,0.414599921413271,0.954670618015114,0.316335993581135,0.813277868507395,0.324016022465404,0.836353184057875,0.436725127492355,0.404593039154462,0.578574190077352,0.26175594198403,0.259229946583586,1.24267862617385,4.50954350947352,0.747582730219894,1.32366792365678,0.972255941720238,1.03327858782185,1.35164900392623,0,0.781226309063701,1.15345278868282,1.44950472495604,2.30424005006292,0.632022241256357,1.01362607645082,0.616265742988964,0.77952493786677,0.716106782669926,0.596044064343795,0.240390899039938,0.738447635872886,0.302899349844443,0.533447646584999,0.705783295957884,1.55932609183604,0.673482891482306,0.233753804363138,1.36038230169127,0.665957860122194,0.807424709485281,0.671538465456314,1.73870634628971,0.563047426353546,0.183151624267265,0.857473516316263,0.501572104035363,0,0.460325236507177,0.572895513439397,1.03111909406213,0.685082519770642,0.755393897389701,3.37511250115903,0.45032120322422,1.81256963593682,1.03552062350364,0.62272408550506,1.99512436700516,0.512200817262403,1.21553358534147,0.838452650511929,0.183843508450014,1.11123363900808,1.03017528619447,0.64183841918363,0.252697211763798,0.50695859978048,0.754505365544305,0.468207537349412,0.384150914429216,0.746661096422973,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.588795680537589,0,0,0.476872379894642,0.436039249896986,0.658765662907314,0.592302255241736,0.73171189149109,0.789209134313529,0.407412341537585,0.561142271657738,0.593175090620871,0.886540341380071,0.409231043169689,1.08455788830176,0.771626443924566,1.24905288968973,0.935726433781634,0,0.765153328275374,1.10295709559758,0.927471342481686|short_description=p5@Gtf3c5}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:70239
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-23bp_to_ENSMUST00000139553_5end
|cluster_id=chr2:28438531..28438540,-
|description=CAGE_peak_5_at_Gtf3c5_5end
|id=chr2:28438531..28438540,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!2.20e-08!50;UBERON:0006238!2.20e-08!50;UBERON:0001049!3.58e-08!52;UBERON:0005068!3.58e-08!52;UBERON:0006241!3.58e-08!52;UBERON:0007135!3.58e-08!52;UBERON:0002616!5.81e-08!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.57e-11,54;UBERON:0001049,1.14e-09,52;UBERON:0005068,1.14e-09,52;UBERON:0006241,1.14e-09,52;UBERON:0007135,1.14e-09,52;UBERON:0001017,2.65e-09,73;UBERON:0003076,6.69e-09,12;UBERON:0003057,6.69e-09,12;UBERON:0001016,9.24e-09,75;UBERON:0000955,5.83e-08,47;UBERON:0006238,5.83e-08,47;UBERON:0004121,7.13e-08,95;UBERON:0000924,7.13e-08,95;UBERON:0006601,7.13e-08,95;UBERON:0002346,1.05e-07,64;UBERON:0003075,1.05e-07,64;UBERON:0007284,1.05e-07,64;UBERON:0002616,2.15e-07,46;UBERON:0010371,2.87e-07,73
|phase1_expression=0.320297694209588,0.697950815278722,0,0.30246421130683,0.500895729946347,0.503637815735669,0.700837921786577,0.645616617207881,0.281577444303333,0.234064526321993,0.513653904676515,0.638177271962691,0.684802919724823,0.961624426608971,0.666219523631325,0.202475267389826,0,0.946386496074713,1.23402990245165,0,1.78590909317247,0.297872853602656,0.261199789138935,0.639969691173627,0.45881856213434,0,0.430761996159075,0.861884930743556,0.760093677825496,0.504060259519861,0.443461021310609,1.90509202037889,1.84519436275371,0,1.1554064790051,0.664938581433969,0.612508068787107,0,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0.125896817975577,0.811015449756117,0.183546752161682,3.9119567217402,1.09012578190223,0.659058548203415,0.972149495371417,0.55994568650145,0,0.335565212115473,0,0.336093799142464,0.514518872071894,0,0,0.606949382578793,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,1.53687322128622,0.207379224616955,0.405017814995072,1.05162480675691,1.42825492201902,1.10434270475807,0.122490799214954,0.958454710182364,0.919218786610021,2.20231761998777,3.06449611404451,2.15049146558741,1.58263545276233,0.731901148819277,2.08365348222704,1.3959149950069,3.37657566019008,3.51435969886663,0.589257170947335,1.56608848879013,1.4911955666024,0.605809546665472,0.604572480854284,0.869593466105033,0,0,1.07940638327563,0,0.448026887097336,0.561777680527007,1.02258193546835,0.519572009205738,0.35333957451034,0.845060518660083,0,0,14.2213340630666,0.649473123033642,0.760079596425296,0.505524445014783,0.79928715803342,1.55362730188303,0.742210695324124,0.693941307064543,0.304465478312141,0.691846491768175,0,0.587943535678524,0.376999773989026,0.741584903203122,1.3013942122792,0.884610551949874,0.323533699894818,0.662524555381181,0,1.86391761218122,3.22058876712702,2.09446706813455,0.510914110417183,1.31796636956512,0.599902730993408,0.635351135365324,4.19413790333504,3.20250421973039,1.50785222535437,1.39059456153821,0.511430914660661,2.0778804455956,0.811206315338788,0.305518091550949,0.622034853050465,0.505445516867349,1.68353484709179,0.260240885925407,0.689706313300419,0.180062129805349,0.60281927134286,0.476255494059295,0.2562274405697,0.0937017245597288,0.776110112217047,1.07783996466421,0.189106080167819,0.527853372491847,0.43839146485515,1.94633074457919,1.0447564995665,0.205782136407943,0.59710280045548,0.702213187313235,0.257347907114715,0.852490498186778,0.828503090142008,0.938104239924385,0.540186184383045,1.65721314909647,1.18058539048442,0.617068451549513,1.39520366850245,1.07309360559848,0.467061369468678,0.822799249567402,0.32833492815819,0.891756905004413,1.46199987425332,0.658650345873152,0.939444931322602,1.47202963994889,0.411618449517138,0.330418782983798,0.793351699990633,1.2797295032114,0.464473343720877,0.515469845288373,1.61346819698674,0.667134131534611,0.570676878337677,1.42358718463353,0,0,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,1.1948476395262,0.758671603812327,0.913988100877831,1.1270773567308,0.203651327845314,0.387904974335251,0.561086559122548,0.948548056863859,1.91893192373483,0.627994911365499,0.616985819609003,0.296452627087149,0.333690211432188,0.589676985339609,0,1.01430060694251,0.241177159752417,0.763877555344259,0,0.162135226775035,0,0,0,0,0,1.07638448113147,0.482443521363367,0.739012760666419,0.757965647081939,0.814824882210129,0.848725428875941,1.17345124144251,0.837531287209079,0.714130922658041,0.195133647857799,0.630540576424764,0.44292937929755,0.318909537314974,0.491589944147214,0.518054945597687,0.433947175744535,0,0.54390568381871,0.983528546038072,0.551873492609465,1.9266070798535,1.52375192569864,1.14754461763673,0.504941854408746,0.315508219416257,1.56175497718655,0.215423397732799,0,1.11399337041197,0.283076530788832,0,0.584511715822624,0.790575555893047,1.60660658210904,0.567760340833074,0,0.488660878060728,0.329940245945071,0,1.45668381692989,0.604647113929502,1.32023555829129,1.47650946440386,1.53717573971964,1.03371317267288,0.727067458955011,1.78248689192361,1.26414703174326,1.05418608574999,1.03135543248187,1.36175842301515,0.540183282093931,1.03486947026204,0.643011105094777,1.24138163549592,0.891844088010353,0.329098041204242,0.608929898229199,0.938686832254841,1.48282449604674,0.882113592219848,1.15420377059036,0.322928853391811,1.14594557363496,0.954978752025092,1.14898629821543,0.582961673259701,1.8542530201051,0.170870880797853,1.23832120777933,1.48155621895769,0.941842285023455,0.546776910884101,1.14389086603261,0.339956859987711,0.419854356970974,0.414599921413271,0.954670618015114,0.316335993581135,0.813277868507395,0.324016022465404,0.836353184057875,0.436725127492355,0.404593039154462,0.578574190077352,0.26175594198403,0.259229946583586,1.24267862617385,4.50954350947352,0.747582730219894,1.32366792365678,0.972255941720238,1.03327858782185,1.35164900392623,0,0.781226309063701,1.15345278868282,1.44950472495604,2.30424005006292,0.632022241256357,1.01362607645082,0.616265742988964,0.77952493786677,0.716106782669926,0.596044064343795,0.240390899039938,0.738447635872886,0.302899349844443,0.533447646584999,0.705783295957884,1.55932609183604,0.673482891482306,0.233753804363138,1.36038230169127,0.665957860122194,0.807424709485281,0.671538465456314,1.73870634628971,0.563047426353546,0.183151624267265,0.857473516316263,0.501572104035363,0,0.460325236507177,0.572895513439397,1.03111909406213,0.685082519770642,0.755393897389701,3.37511250115903,0.45032120322422,1.81256963593682,1.03552062350364,0.62272408550506,1.99512436700516,0.512200817262403,1.21553358534147,0.838452650511929,0.183843508450014,1.11123363900808,1.03017528619447,0.64183841918363,0.252697211763798,0.50695859978048,0.754505365544305,0.468207537349412,0.384150914429216,0.746661096422973,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.588795680537589,0,0,0.476872379894642,0.436039249896986,0.658765662907314,0.592302255241736,0.73171189149109,0.789209134313529,0.407412341537585,0.561142271657738,0.593175090620871,0.886540341380071,0.409231043169689,1.08455788830176,0.771626443924566,1.24905288968973,0.935726433781634,0,0.765153328275374,1.10295709559758,0.927471342481686
|short_description=p5@Gtf3c5
}}

Revision as of 23:05, 4 August 2015

Short description:p5@Gtf3c5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Gtf3c5_5end
Coexpression cluster:NA
Association with transcript: -23bp_to_ENSMUST00000139553_5end
EntrezGene:70239
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Gtf3c5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.57e-1154
neural tube1.14e-0952
neural rod1.14e-0952
future spinal cord1.14e-0952
neural keel1.14e-0952
central nervous system2.65e-0973
posterior neural tube6.69e-0912
chordal neural plate6.69e-0912
nervous system9.24e-0975
brain5.83e-0847
future brain5.83e-0847
ectoderm-derived structure7.13e-0895
ectoderm7.13e-0895
presumptive ectoderm7.13e-0895
neurectoderm1.05e-0764
neural plate1.05e-0764
presumptive neural plate1.05e-0764
regional part of brain2.15e-0746
ecto-epithelium2.87e-0773
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:28438531..28438540,-&oldid=3831513"