FFCP PHASE1:Hg19::chr7:134654032..134654049,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1441 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-215bp_to_AJ223812_5end | |||
|coexpression_cluster_id=C320 | |||
|description=CAGE_peak_39_at_CALD1_5end | |||
|id=chr7:134654032..134654049,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.27e-18!180;CL:0000057!1.61e-10!75;CL:0000680!8.75e-10!57;CL:0000056!8.75e-10!57;CL:0000355!8.75e-10!57;CL:0000187!7.78e-09!54;CL:0000393!6.01e-08!60;CL:0000211!6.01e-08!60;CL:0000192!1.03e-07!42;CL:0000514!1.03e-07!42;CL:0000183!4.01e-07!59;CL:0002334!4.48e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002580;5.86e-10;3!CL:0000135;1.85e-09;3!CL:0000388;1.85e-09;3!CL:0000197;6.62e-09;6!CL:0000098;6.62e-09;6!CL:0002167;6.62e-09;6!CL:0002334;9.00e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.30e-11,76;CL:0002580,2.53e-10,3;CL:0000135,3.91e-10,3;CL:0000388,3.91e-10,3;CL:0002334,4.99e-09,12;CL:0000197,6.48e-09,6;CL:0000098,6.48e-09,6;CL:0002167,6.48e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!7.43e-10!63;UBERON:0001015!7.43e-10!63;UBERON:0000383!7.43e-10!63;UBERON:0000914!3.95e-09!83;UBERON:0002329!3.95e-09!83;UBERON:0003077!3.95e-09!83;UBERON:0003059!3.95e-09!83;UBERON:0007282!3.95e-09!83;UBERON:0009618!3.95e-09!83;UBERON:0007285!3.95e-09!83;UBERON:0001134!4.30e-09!61;UBERON:0002036!4.30e-09!61;UBERON:0003082!4.30e-09!61;UBERON:0005256!1.62e-07!143;UBERON:0004290!4.21e-07!70;UBERON:0000486!6.02e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.85e-09;3!UBERON:0000043;1.85e-09;3!UBERON:0007845;1.85e-09;3!UBERON:0003688;2.08e-08;6!UBERON:0002358;2.08e-08;6!UBERON:0003684;2.08e-08;6!UBERON:0001178;2.08e-08;6!UBERON:0001135;6.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.91e-10,3;UBERON:0000043,3.91e-10,3;UBERON:0007845,3.91e-10,3;UBERON:0003688,3.07e-08,6;UBERON:0002358,3.07e-08,6;UBERON:0003684,3.07e-08,6;UBERON:0001178,3.07e-08,6;UBERON:0001135,8.41e-07,15 | |||
|phase1_expression=3.63356758541113,0.856402095563933,1.26858963686374,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,2.01697543935533,0.602694528023977,1.46062018077475,3.41552959153355,0,0,0,0.572471974262113,0.273748850145768,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0,0.50133791063589,1.15877215168659,0,0,0.472674085820339,0.886917589850256,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,3.47880366186723,0.633152558322899,0.794455084879313,0.286836620748814,0.709336764396714,0.560677600142307,1.06748995729705,1.2333377420858,0.311211035399766,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0,0,0,0,0,0,0,0.368502951935304,0,1.18800285728205,2.22540236350701,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,1.83892677479412,0.45071417671979,0.680593098960126,1.25572744982203,2.34913127700424,1.27159140695737,0,0.103052529238439,0.772921620136887,1.8611685633159,0.506328996723799,0.0974370051611986,0.504867548488229,0.736399189138395,0,1.42003837006646,0,0.339121184620975,0.193260853163297,1.09098448236334,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,5.14592750554308,0,0,0,0.354920400119532,0,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.201057944823262,0.462942225792648,0,0,0,0.34779121492523,0.234817388471643,0,0,0.570762456703795,0,0,0,0,0,0,0.503946384596579,0.567100388969546,0.179117045405697,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0.1466765716419,0.646358578788889,0,0,3.45719551560332,1.04007436911366,0,0,0,0.714889968290738,0,0.823240336780769,0.325736184293735,0.710783897485092,0,0.301439377059586,0,0.799783929456456,0,0,0,0.479249710983165,0,0,0.289562613335158,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,2.07970861530807,4.63915370872621,2.20783381047509,1.52283839490527,0.300946099727719,0,1.03473071292505,1.32845119707087,0,0.521301686808497,0,0,0,0,0,0,0,0.604780586659361,1.48864684691266,3.6830873589135,1.96462066103151,1.53766979106841,0.511707249066704,4.66476371316462,1.48418066444991,0.462629081407967,0.887808626565635,0.246381468041427,0,0.232420756919918,0,0.40101294060657,0,0.34444334449382,1.27463817604702,0.786746489756545,0,0.539107359730903,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.290012154876366,0,0.15350367472613,0,0.751941714077915,0.870100163485371,0.340906509664404,0.267096106940212,0.330569830721956,0.384380134730212,0.382838137483752,0.10115778085555,0.464845549297286,0,0,0,0.532306030317022,0,0.37064843820784,0,0.744316738719335,1.58189712359363,0.953150969619124,0.255897791311334,0.42793898803392,0.318203247925937,0,0.539617372749944,1.09814811894422,1.17812402345686,0,1.58510321173008,0.421258456238981,0,0.731140468893853,0,0.136499911407986,0.707027159768564,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0.608731130888112,0.92947049429925,0.281695602532241,0.430234056612155,0.491245205065606,0.35667105148125,0,0.633322905892992,0,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.47748896947538,0.593929361665277,0.307160702099232,0,0,0.111308705022906,0,0,0.796991953004279,0.276283915531148,0,0.306806047506464,0,4.3545542272653,0,0,0,0.986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0,0.692552326534174,0.797594390929008,0,0.179515288819544,0.108647371922008,0.638002319463839,2.47313502185028,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0.789168805698781,0,0,0.31593289814244,0,0.103688191397247,0,0,0,0,0,0.554698692052555,0,0,0,0.17472666824203,0,0.290268993867255,0,0,1.35784623083787,0.353024506766001,0.225980740780532,0.274083849293502,0,0,0,0.160317640503067,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0,0,0.135904206073614,0.313808538937,0.305994652908965,0.288950589901519,0,0.136905378891993,0,0.859530882839914,0,0,0.458320848023367,0,0,0,0,0.201550417460179,1.44119953416961,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.136203406111576,0,0.275078873194468,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0.542999601753713,0.864221491201268,0.979762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| |||
|short_description=p39@CALD1 | |||
}} |
Revision as of 19:28, 22 January 2014
Short description: | p39@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_CALD1_5end |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | -215bp_to_AJ223812_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.30e-11 | 76 |
preadipocyte of the breast | 2.53e-10 | 3 |
fibrocyte | 3.91e-10 | 3 |
tendon cell | 3.91e-10 | 3 |
preadipocyte | 4.99e-09 | 12 |
receptor cell | 6.48e-09 | 6 |
sensory epithelial cell | 6.48e-09 | 6 |
olfactory epithelial cell | 6.48e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.91e-10 | 3 |
tendon | 3.91e-10 | 3 |
regular connective tissue | 3.91e-10 | 3 |
omentum | 3.07e-08 | 6 |
peritoneum | 3.07e-08 | 6 |
abdominal cavity | 3.07e-08 | 6 |
visceral peritoneum | 3.07e-08 | 6 |
smooth muscle tissue | 8.41e-07 | 15 |