FFCP PHASE1:Mm9::chr2:156754339..156754355,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:156754339..156754355,-|id=chr2:156754339..156754355,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,1.80e-22,2;CL:0002194,9.19e-12,4;CL:0000766,9.19e-12,4;CL:0000234,9.19e-12,4;CL:0000576,9.19e-12,4;CL:0000235,9.19e-12,4;CL:0000864,9.19e-12,4;CL:0002009,9.19e-12,4;CL:0000040,9.19e-12,4;CL:0000559,9.19e-12,4;CL:0000473,4.05e-07,7;CL:0000557,4.05e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.79e-27,10;UBERON:0000411,1.79e-27,10;UBERON:0001950,1.79e-27,10;UBERON:0002619,2.60e-16,17;UBERON:0000956,2.93e-13,21;UBERON:0001869,2.93e-13,21;UBERON:0000203,2.93e-13,21;UBERON:0003528,1.16e-09,29;UBERON:0002791,1.16e-09,29;UBERON:0001893,1.16e-09,29;UBERON:0002616,1.08e-08,46;UBERON:0000955,1.66e-08,47;UBERON:0006238,1.66e-08,47;UBERON:0002020,2.88e-08,34;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0000073,2.11e-07,54;UBERON:0002780,3.17e-07,39;UBERON:0001890,3.17e-07,39;UBERON:0006240,3.17e-07,39;UBERON:0003080,4.78e-07,40|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,0.0850432901510698,0.198581902401771,0,0.159992422793407,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0.384218305321555,0.207379224616955,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.614426133024974,0.131886287730194,0,0.52091337055676,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0.860423876981386,0,0.539703191637817,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0,0,0,0,0.23517741427141,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0.878342391034642,5.86450779077674,0.510914110417183,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0,0,0.898819408654221,0.216138049874694,0.597423819763102,0.379335801906163,0,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0.144649058581512,1.50791283939272,1.08781136763742,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0,0,0.390438744296638,0,0,0.222798674082394,0,0,0.584511715822624,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.582961673259701,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0.576060012515731,0.632022241256357,0.202725215290164,0.102710957164827,0.25984164595559,0.358053391334963,0,0.120195449519969,0,0.201932899896295,0.304827226619999,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.221985953374065,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,3.3885110557024,0.920650473014354,1.71868654031819,1.3748254587495,0,0,0,1.35096360967266,1.35942722695261,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p@chr2:156754339..156754355,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:156754339..156754355,- | |||
|description=CAGE_peak_at_chr2:156754339..156754355,- | |||
|id=chr2:156754339..156754355,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.80e-22,2;CL:0002194,9.19e-12,4;CL:0000766,9.19e-12,4;CL:0000234,9.19e-12,4;CL:0000576,9.19e-12,4;CL:0000235,9.19e-12,4;CL:0000864,9.19e-12,4;CL:0002009,9.19e-12,4;CL:0000040,9.19e-12,4;CL:0000559,9.19e-12,4;CL:0000473,4.05e-07,7;CL:0000557,4.05e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.79e-27,10;UBERON:0000411,1.79e-27,10;UBERON:0001950,1.79e-27,10;UBERON:0002619,2.60e-16,17;UBERON:0000956,2.93e-13,21;UBERON:0001869,2.93e-13,21;UBERON:0000203,2.93e-13,21;UBERON:0003528,1.16e-09,29;UBERON:0002791,1.16e-09,29;UBERON:0001893,1.16e-09,29;UBERON:0002616,1.08e-08,46;UBERON:0000955,1.66e-08,47;UBERON:0006238,1.66e-08,47;UBERON:0002020,2.88e-08,34;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0000073,2.11e-07,54;UBERON:0002780,3.17e-07,39;UBERON:0001890,3.17e-07,39;UBERON:0006240,3.17e-07,39;UBERON:0003080,4.78e-07,40 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,0.0850432901510698,0.198581902401771,0,0.159992422793407,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0.384218305321555,0.207379224616955,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.614426133024974,0.131886287730194,0,0.52091337055676,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0.860423876981386,0,0.539703191637817,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0,0,0,0,0.23517741427141,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0.878342391034642,5.86450779077674,0.510914110417183,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0,0,0.898819408654221,0.216138049874694,0.597423819763102,0.379335801906163,0,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0.144649058581512,1.50791283939272,1.08781136763742,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0,0,0.390438744296638,0,0,0.222798674082394,0,0,0.584511715822624,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.582961673259701,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0.576060012515731,0.632022241256357,0.202725215290164,0.102710957164827,0.25984164595559,0.358053391334963,0,0.120195449519969,0,0.201932899896295,0.304827226619999,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.221985953374065,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,3.3885110557024,0.920650473014354,1.71868654031819,1.3748254587495,0,0,0,1.35096360967266,1.35942722695261,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr2:156754339..156754355,- | |||
}} |
Latest revision as of 09:17, 4 August 2015
Short description: | p@chr2:156754339..156754355, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:156754339..156754355, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.80e-22 | 2 |
monopoietic cell | 9.19e-12 | 4 |
myeloid leukocyte | 9.19e-12 | 4 |
phagocyte | 9.19e-12 | 4 |
monocyte | 9.19e-12 | 4 |
macrophage | 9.19e-12 | 4 |
tissue-resident macrophage | 9.19e-12 | 4 |
macrophage dendritic cell progenitor | 9.19e-12 | 4 |
monoblast | 9.19e-12 | 4 |
promonocyte | 9.19e-12 | 4 |
defensive cell | 4.05e-07 | 7 |
granulocyte monocyte progenitor cell | 4.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.79e-27 | 10 |
visual cortex | 1.79e-27 | 10 |
neocortex | 1.79e-27 | 10 |
regional part of cerebral cortex | 2.60e-16 | 17 |
cerebral cortex | 2.93e-13 | 21 |
cerebral hemisphere | 2.93e-13 | 21 |
pallium | 2.93e-13 | 21 |
brain grey matter | 1.16e-09 | 29 |
regional part of telencephalon | 1.16e-09 | 29 |
telencephalon | 1.16e-09 | 29 |
regional part of brain | 1.08e-08 | 46 |
brain | 1.66e-08 | 47 |
future brain | 1.66e-08 | 47 |
gray matter | 2.88e-08 | 34 |
neural tube | 1.09e-07 | 52 |
neural rod | 1.09e-07 | 52 |
future spinal cord | 1.09e-07 | 52 |
neural keel | 1.09e-07 | 52 |
regional part of nervous system | 2.11e-07 | 54 |
regional part of forebrain | 3.17e-07 | 39 |
forebrain | 3.17e-07 | 39 |
future forebrain | 3.17e-07 | 39 |
anterior neural tube | 4.78e-07 | 40 |