FFCP PHASE1:Hg19::chr6:89790459..89790479,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10957 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17278 | |||
|TSSclassifier=strong | |||
|UniProt=Q49A59 | |||
|association_with_transcript=0bp_to_ENST00000369472_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_PNRC1_5end | |||
|id=chr6:89790459..89790479,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.44e-29!140;CL:0002057!4.60e-23!42;CL:0002031!9.13e-22!124;CL:0000766!3.34e-21!76;CL:0002087!4.07e-21!119;CL:0000860!1.14e-20!45;CL:0000557!3.86e-17!71;CL:0000037!1.14e-16!172;CL:0000566!1.14e-16!172;CL:0002009!2.96e-16!65;CL:0000839!4.65e-16!70;CL:0002194!1.44e-15!63;CL:0000576!1.44e-15!63;CL:0000040!1.44e-15!63;CL:0000559!1.44e-15!63;CL:0000988!1.86e-15!182;CL:0002032!9.23e-15!165;CL:0000837!9.23e-15!165;CL:0000763!1.36e-09!112;CL:0000049!1.36e-09!112;CL:0000791!1.21e-08!18;CL:0000789!1.21e-08!18;CL:0002420!1.21e-08!18;CL:0002419!1.21e-08!18;CL:0000790!1.21e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.49e-17;33!CL:0002057;2.49e-17;33!CL:0000576;1.09e-13;48!CL:0000473;1.89e-12;39!CL:0000234;1.89e-12;39!CL:0000766;4.50e-11;69!CL:0002087;9.90e-09;104!CL:0000791;1.22e-08;18!CL:0000789;1.22e-08;18!CL:0002419;1.22e-08;18!CL:0000738;8.09e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.14e-30,136;CL:0000860,4.60e-23,42;CL:0002057,4.60e-23,42;CL:0000766,5.03e-23,72;CL:0002031,5.23e-23,120;CL:0002087,2.26e-22,115;CL:0000473,2.97e-20,48;CL:0000234,2.97e-20,48;CL:0000557,9.29e-19,67;CL:0002009,6.37e-18,61;CL:0000839,1.31e-17,66;CL:0000037,1.86e-17,168;CL:0002194,3.23e-17,59;CL:0000576,3.23e-17,59;CL:0000040,3.23e-17,59;CL:0000559,3.23e-17,59;CL:0000988,2.80e-16,177;CL:0002032,1.67e-15,161;CL:0000837,1.67e-15,161;CL:0000763,2.65e-10,108;CL:0000049,2.65e-10,108;CL:0000791,1.21e-08,18;CL:0000789,1.21e-08,18;CL:0002420,1.21e-08,18;CL:0002419,1.21e-08,18;CL:0000790,1.21e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;8.75e-17;42!CL:0000790;1.22e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.98e-24!115;UBERON:0002193!9.62e-21!112;UBERON:0002390!9.98e-20!102;UBERON:0003061!9.98e-20!102;UBERON:0002405!5.61e-16!115;UBERON:0002371!3.97e-14!80;UBERON:0001474!2.55e-12!86;UBERON:0003081!4.00e-10!216;UBERON:0004765!3.23e-09!101;UBERON:0001434!3.23e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.81e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.51e-24,114;UBERON:0002193,4.83e-22,108;UBERON:0002390,4.49e-21,98;UBERON:0003061,4.49e-21,98;UBERON:0002405,1.84e-17,93;UBERON:0002371,2.22e-15,76;UBERON:0001474,2.23e-13,82;UBERON:0004765,1.49e-12,90;UBERON:0003081,5.84e-12,203;UBERON:0001434,2.07e-10,100 | |||
|phase1_expression=370.442215332665,291.81901406341,470.92866408464,328.240418598268,508.194764363826,394.297012893367,397.680808724248,397.983520258904,620.577052602816,125.078573679268,193.988724696335,171.694918494315,260.074240533255,435.533796066404,431.479383197746,241.364727576187,262.774814218454,215.441476664275,235.671541815815,202.78038265247,155.040525345632,315.335449806956,166.016872536013,91.4321159486866,76.4554675132349,151.757023815431,107.633872768879,103.504677427488,1854.31920106573,1377.5637097709,1886.12483035975,59.7623795911303,115.964278729626,257.718545086251,85.9111254435545,134.207755468126,889.609331184587,2489.10137053373,3415.07139596904,1960.04218430557,318.855635317652,439.199811121736,394.090618480305,923.424214489015,824.525309128982,974.21758973027,2356.13314711293,1881.09308769985,2008.13610888385,2024.77905716329,1476.25415172721,1665.07138064553,4003.18684471361,3092.51711905011,3796.0044192394,1962.04990505257,1608.23594229089,1597.10980395122,4598.29831508807,3184.89966470315,4785.43838660582,1046.28832419226,834.954870804151,1058.31605557268,5722.34576727842,4850.57628588455,6165.94026505619,1154.73886551999,964.743399077373,1027.95480198932,4252.32610649678,3688.30052441546,4472.24645931458,846.499932251951,1109.79444581753,931.303703348206,967.935814589348,1177.98754744878,822.432827128959,880.119352672976,1049.2854722252,783.446555496515,1184.4547252247,1174.74415282484,1341.37995482624,1117.17972267912,1129.51707942859,1138.00983110988,1357.12512382732,1213.55637576898,1983.70719734643,2035.95133554904,2135.76052553565,1855.68545324952,2131.0535564558,458.815075678184,1886.05327585143,2011.42908375023,1758.3040194438,309.796575958926,1624.39657690181,1719.56243042855,1638.49278591053,511.262586646062,1215.83858014865,1278.02903785291,906.380532021507,382.864954660043,344.787330381237,372.451853927326,398.773075664979,594.675931928328,1696.10170944765,1665.44165485846,1565.94214659855,328.257165794849,1343.95427106194,1483.783309594,1140.86579131594,1001.25109722064,1041.73352617027,1054.05131729325,1171.47442642507,1060.2410868032,1018.18542140162,958.711093526224,940.191556474598,1753.77705931195,1683.00115206561,1458.81622031143,282.815964924196,384.311592610183,458.131559085369,150.720126544364,357.453930283389,396.155229357853,148.718472098556,607.806953007992,122.422588227468,108.425675359194,105.577412403138,465.958061083113,287.064687174523,177.976532536526,209.008521513616,250.920951448244,240.919824460184,1525.62452368127,1178.30951620706,1430.11138011883,287.211678644889,202.155129849939,412.75005641143,258.911037401196,270.157636919179,250.357418165461,182.452605786636,266.686095462747,272.51695721802,422.082692696249,565.572361221242,208.314556966872,545.966822735255,197.067411065386,330.537914735758,162.614805205309,161.21208954559,128.602310711954,160.982469339177,324.6488555723,205.735558433847,5226.41135551427,6790.03242523718,487.117056243211,280.789152707855,145.371827390938,82.7557380082618,160.054834377838,175.560849188187,188.387673647815,196.418152142657,176.120629569852,370.652343161122,244.095737790275,160.029203148076,402.308042680228,237.96065681024,269.7039680407,165.44484072007,160.30258185399,202.951308189346,81.8518455547041,91.2963406236262,64.4669202763321,161.690103633875,60.1888154827663,457.733210608641,236.412568599129,299.934785214889,577.042303468709,608.669566118354,83.999720863079,83.2038157148562,114.427479694968,95.2581437311418,140.371410475951,260.813270261852,119.330656684342,52.2023839854588,361.552659269835,236.516001694071,47.4143931813356,211.566842526515,83.4755349747839,230.412668138508,36.2869114318722,168.468581923712,74.4679634020138,330.090936531285,534.72515595663,58.5765827652414,126.141626981006,103.092840124776,179.152810882376,140.736998224871,140.821056336001,100.506333850787,112.517773304941,212.518721508349,163.162500594193,175.362991358562,163.144879506896,147.062560390027,301.680000012463,165.761905622977,696.087524119937,534.912695917163,96.6566556325525,89.0127163612377,77.3645405925977,81.6175398219715,92.816643183365,65.7239614937738,101.932468969084,95.5598535160435,63.098533739208,380.150059131694,263.654534750478,322.262450872486,379.282475374698,338.435942974288,493.379262772168,484.447723478751,146.565749005664,140.452796816236,163.504123214495,226.74408965422,184.338875342496,48.1533777851712,245.54455656042,304.630765465154,185.108391779765,98.1453125771858,314.519188697383,224.602832073127,250.620153313224,337.053453155773,238.198198597717,333.466255938814,366.573591214511,252.126214233495,101.557851070429,201.692487225804,101.232540705719,107.50856204727,91.728487915824,131.203235759673,105.500119680568,98.9127312246245,232.044385048989,336.345017930524,1298.7033157474,1215.9400469789,1230.8637259072,74.2290384275456,255.168268272929,335.241899020734,224.104904289744,65.0898028812038,64.2734143785983,268.105193807482,119.531735912155,123.812659548652,48.0365772127223,176.972978872398,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| |||
|short_description=p1@PNRC1 | |||
}} |
Revision as of 12:57, 22 January 2014
Short description: | p1@PNRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PNRC1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000369472_5end |
EntrezGene: | PNRC1 |
HGNC: | 17278 |
UniProt: | Q49A59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.14e-30 | 136 |
classical monocyte | 4.60e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.60e-23 | 42 |
myeloid leukocyte | 5.03e-23 | 72 |
hematopoietic lineage restricted progenitor cell | 5.23e-23 | 120 |
nongranular leukocyte | 2.26e-22 | 115 |
defensive cell | 2.97e-20 | 48 |
phagocyte | 2.97e-20 | 48 |
granulocyte monocyte progenitor cell | 9.29e-19 | 67 |
macrophage dendritic cell progenitor | 6.37e-18 | 61 |
myeloid lineage restricted progenitor cell | 1.31e-17 | 66 |
hematopoietic stem cell | 1.86e-17 | 168 |
monopoietic cell | 3.23e-17 | 59 |
monocyte | 3.23e-17 | 59 |
monoblast | 3.23e-17 | 59 |
promonocyte | 3.23e-17 | 59 |
hematopoietic cell | 2.80e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.67e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-15 | 161 |
myeloid cell | 2.65e-10 | 108 |
common myeloid progenitor | 2.65e-10 | 108 |
mature alpha-beta T cell | 1.21e-08 | 18 |
alpha-beta T cell | 1.21e-08 | 18 |
immature T cell | 1.21e-08 | 18 |
mature T cell | 1.21e-08 | 18 |
immature alpha-beta T cell | 1.21e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.51e-24 | 114 |
hemolymphoid system | 4.83e-22 | 108 |
hematopoietic system | 4.49e-21 | 98 |
blood island | 4.49e-21 | 98 |
immune system | 1.84e-17 | 93 |
bone marrow | 2.22e-15 | 76 |
bone element | 2.23e-13 | 82 |
skeletal element | 1.49e-12 | 90 |
lateral plate mesoderm | 5.84e-12 | 203 |
skeletal system | 2.07e-10 | 100 |