FFCP PHASE1:Hg19::chr6:72596473..72596486,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=67bp_to_ENST00000370419,ENST00000491071_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_7_at_RIMS1_5end | |||
|id=chr6:72596473..72596486,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.78e-08!8;CL:0000540!5.36e-08!6;CL:0000031!5.36e-08!6;CL:0000404!5.36e-08!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.31e-19;3!UBERON:0006601;8.25e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.77e-60!86;UBERON:0001017!2.87e-59!82;UBERON:0001049!5.43e-57!57;UBERON:0005068!5.43e-57!57;UBERON:0006241!5.43e-57!57;UBERON:0007135!5.43e-57!57;UBERON:0000073!2.71e-55!94;UBERON:0001016!2.71e-55!94;UBERON:0002616!3.33e-49!59;UBERON:0003075!1.63e-46!86;UBERON:0007284!1.63e-46!86;UBERON:0000955!3.26e-44!69;UBERON:0006238!3.26e-44!69;UBERON:0002346!8.56e-44!90;UBERON:0003080!9.49e-40!42;UBERON:0002780!4.36e-38!41;UBERON:0001890!4.36e-38!41;UBERON:0006240!4.36e-38!41;UBERON:0001893!2.36e-35!34;UBERON:0002020!3.04e-35!34;UBERON:0003528!3.04e-35!34;UBERON:0001869!4.00e-35!32;UBERON:0002619!2.43e-34!22;UBERON:0003056!1.46e-33!61;UBERON:0002791!1.84e-33!33;UBERON:0001950!9.44e-31!20;UBERON:0007023!2.88e-30!115;UBERON:0000956!1.26e-29!25;UBERON:0000203!1.26e-29!25;UBERON:0004121!1.46e-29!169;UBERON:0000924!1.72e-28!173;UBERON:0006601!1.72e-28!173;UBERON:0000033!4.38e-28!123;UBERON:0000153!2.15e-27!129;UBERON:0007811!2.15e-27!129;UBERON:0003076!7.34e-18!15;UBERON:0003057!7.34e-18!15;UBERON:0004733!3.25e-13!12;UBERON:0002028!3.25e-13!12;UBERON:0007277!3.25e-13!12;UBERON:0000475!6.61e-13!365;UBERON:0004732!4.90e-12!13;UBERON:0002021!1.54e-11!5;UBERON:0001872!2.84e-11!5;UBERON:0002680!3.26e-11!9;UBERON:0001895!3.26e-11!9;UBERON:0010092!3.26e-11!9;UBERON:0000064!5.18e-11!219;UBERON:0000025!1.26e-10!194;UBERON:0001871!1.05e-09!7;UBERON:0000200!1.22e-09!6;UBERON:0002298!5.59e-09!8;UBERON:0002771!1.03e-07!3;UBERON:0002308!2.41e-07!9;UBERON:0000125!2.41e-07!9;UBERON:0000349!2.94e-07!5;UBERON:0000988!5.62e-07!3;UBERON:0004111!7.13e-07!241;UBERON:0000468!9.50e-07!659;UBERON:0000062!9.74e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.08e-68;22!UBERON:0001950;1.31e-66;20!UBERON:0000956;4.20e-60;25!UBERON:0000203;4.20e-60;25!UBERON:0001869;8.27e-52;32!UBERON:0001893;1.47e-47;34!UBERON:0002791;1.55e-45;32!UBERON:0003528;1.03e-42;34!UBERON:0002020;1.03e-42;34!UBERON:0002780;7.15e-31;41!UBERON:0001890;7.15e-31;41!UBERON:0002021;3.06e-29;5!UBERON:0000073;3.74e-27;53!UBERON:0002616;3.74e-27;53!UBERON:0000200;6.41e-24;6!UBERON:0001872;1.56e-18;5!UBERON:0001017;6.31e-17;75!UBERON:0001016;2.14e-16;83!UBERON:0000955;4.47e-15;68!UBERON:0001871;2.73e-13;6!UBERON:0002771;1.24e-12;2!UBERON:0002680;6.19e-11;9!UBERON:0001895;6.19e-11;9!UBERON:0000349;1.04e-10;5!UBERON:0002037;7.61e-10;6!UBERON:0001870;1.88e-08;3!UBERON:0004733;3.23e-08;12!UBERON:0002028;3.23e-08;12!UBERON:0007023;4.10e-08;114!UBERON:0004732;1.37e-07;13!UBERON:0002902;2.36e-07;1!UBERON:0002022;2.36e-07;1!UBERON:0003112;2.36e-07;1!UBERON:0011158;2.36e-07;1!UBERON:0009899;2.36e-07;1!UBERON:0007190;2.36e-07;1!UBERON:0003128;2.36e-07;1!UBERON:0001703;2.36e-07;1!UBERON:0002241;2.36e-07;1!UBERON:0011216;2.57e-07;132!UBERON:0002581;5.94e-07;1!UBERON:0001882;5.94e-07;1!UBERON:0007195;5.94e-07;1!UBERON:0005403;5.94e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.15e-69,22;UBERON:0001950,4.85e-67,20;UBERON:0000956,1.64e-60,25;UBERON:0000203,1.64e-60,25;UBERON:0001869,3.75e-59,32;UBERON:0001893,1.53e-55,34;UBERON:0001049,1.07e-53,56;UBERON:0005068,1.07e-53,56;UBERON:0006241,1.07e-53,56;UBERON:0007135,1.07e-53,56;UBERON:0002791,8.54e-53,32;UBERON:0000073,3.32e-52,53;UBERON:0002616,3.32e-52,53;UBERON:0003528,1.47e-49,34;UBERON:0002020,1.47e-49,34;UBERON:0002780,1.31e-45,41;UBERON:0001890,1.31e-45,41;UBERON:0003080,1.31e-45,41;UBERON:0006240,1.31e-45,41;UBERON:0001017,6.61e-42,81;UBERON:0000955,3.60e-39,68;UBERON:0006238,3.60e-39,68;UBERON:0001016,2.73e-37,89;UBERON:0003075,2.59e-35,82;UBERON:0007284,2.59e-35,82;UBERON:0002346,1.85e-33,86;UBERON:0003056,1.39e-29,61;UBERON:0002021,1.11e-28,5;UBERON:0010371,7.31e-27,104;UBERON:0007023,1.81e-24,114;UBERON:0000200,3.06e-24,6;UBERON:0010314,3.57e-22,132;UBERON:0001872,7.72e-19,5;UBERON:0004121,3.34e-17,171;UBERON:0000924,3.34e-17,171;UBERON:0006601,3.34e-17,171;UBERON:0001871,1.50e-13,6;UBERON:0011216,3.53e-13,223;UBERON:0002771,5.96e-13,2;UBERON:0000025,2.57e-12,192;UBERON:0002680,6.29e-11,9;UBERON:0001895,6.29e-11,9;UBERON:0010092,6.29e-11,9;UBERON:0000349,8.64e-11,5;UBERON:0002037,7.63e-10,6;UBERON:0006215,7.63e-10,6;UBERON:0003076,1.08e-09,15;UBERON:0003057,1.08e-09,15;UBERON:0004111,7.20e-09,240;UBERON:0001870,1.39e-08,3;UBERON:0004733,3.26e-08,12;UBERON:0002028,3.26e-08,12;UBERON:0007277,3.26e-08,12;UBERON:0004732,1.39e-07,13;UBERON:0002022,1.98e-07,1;UBERON:0003112,2.37e-07,1;UBERON:0011158,2.37e-07,1;UBERON:0003128,2.37e-07,1;UBERON:0001703,2.37e-07,1;UBERON:0002241,2.37e-07,1;UBERON:0004761,2.37e-07,1;UBERON:0009617,2.37e-07,1;UBERON:0007190,2.52e-07,1;UBERON:0002902,2.67e-07,1;UBERON:0009899,2.67e-07,1;UBERON:0001882,4.06e-07,1;UBERON:0005403,4.06e-07,1;UBERON:0002581,5.78e-07,1;UBERON:0007195,9.18e-07,1 | |||
|phase1_expression=1.81678379270557,0.642301571672949,0,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0,0,1.03056216018252,0.37223371266318,2.86919764810153,1.26668106709558,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,1.2276957863045,0,0.128139149255701,1.02341449813341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0.969332746095218,0.927680981618513,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0.241192877250816,10.6807215421958,12.8271941520221,8.27533333069933,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.370691816839509,0.313265848516366,0.337005664903385,0,0.702793337176017,0,0,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,1.64608069485285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0.482259445395058,0,0.415440338029185,0,0,2.79447960626913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,1.95242023843141,1.6274820991845,0,0.776503360757966,0.745156835296601,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0,0,0,0,1.79841830270087,5.6678630530234,1.11743701340006,2.05116364240755,1.00828678488687,2.07471757392654,2.26065903884592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09366512317023,2.34323429584154,1.65349437200947,1.8390584956233,0.546974809018219,0.548257766857182,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0.115233987555779,0,1.35939465953663,1.44700101838268,0,0,0,0.314231179832004,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0.196308467114945,1.18818560130834,0.4226557275834,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0,0,1.90376172534561,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0.645499848534087,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@RIMS1 | |||
}} |
Revision as of 12:37, 22 January 2014
Short description: | p7@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RIMS1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 67bp_to_ENST00000370419, ENST00000491071_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data