FFCP PHASE1:Mm9::chr2:115891534..115891589,-: Difference between revisions
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{{FFCP|EntrezGene=17536|HGNC=|MCL_coexpression_id=985|UniProt=P97367|association_with_transcript=0bp_to_ENSMUST00000110907,ENSMUST00000110908_5end|description=CAGE_peak_1_at_Meis2_5end|id=chr2:115891534..115891589,-|ontology_enrichment_celltype=CL:0000117!3.63e-08!23;CL:0000337!3.63e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.41e-08,23;CL:0000337,3.41e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.06e-11!333;UBERON:0000922!3.15e-10!328;UBERON:0002346!4.81e-09!71;UBERON:0003075!4.81e-09!71;UBERON:0007284!4.81e-09!71;UBERON:0002020!1.21e-08!34;UBERON:0000479!8.01e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.95e-09,92;UBERON:0002020,1.13e-08,34;UBERON:0000922,1.30e-07,320;UBERON:0002346,3.85e-07,64;UBERON:0003075,3.85e-07,64;UBERON:0007284,3.85e-07,64;UBERON:0000479,9.61e-07,349|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,3.0246421130683,2.50447864973174,0.33575854382378,1.16806320297763,0,0,0,0.171217968225505,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,10.1201515279773,0,0.522399578277871,0.319984845586813,0.68822784320151,0,0.430761996159075,0.430942465371778,0,0,0,0,0,15.8481681015439,0,0.498703936075477,0.816677425049476,0,0,0,0,0,0,3.77690453926732,4.66333883609767,6.9747765821439,0,47.7475092473178,10.1055644057857,14.1933826324227,14.1386285841616,21.5628846547457,0.167782606057736,0,0,19.0371982666601,15.1862723167541,25.7836046138721,145.87016827977,141.769582444905,162.260839297582,3.38844532069132,1.77858959222228,0.899899717281399,0.988866362566974,1.4209602298922,17.0772062995491,31.5059010363675,183.426924173697,180.50293954947,193.28863948192,47.989365379839,51.462370041726,308.799304820899,277.18510218474,375.960483723499,12.1127469099328,6.76742891851495,11.2132769277058,55.9197859976022,40.0715878978554,58.3422975023571,24.5681039121215,2.8138130501584,5.19514042441154,69.2377175863119,61.9316811476098,82.9477533922588,1.21161909333094,5.51672388779534,32.7546872232896,9.46466264679525,0,1.61910957491345,1.94932925234301,1.34408066129201,3.93244376368905,4.09032774187339,7.01422212427746,6.36011234118612,0,1.28326477414318,0,0,4.76280290224671,3.80039798212648,5.56076889516262,3.19714863213368,4.40194402200192,48.6890216132625,34.1766093729288,38.6671157456419,31.8249386213361,39.941499746445,32.3368944623188,31.9193141977376,4.20231445148436,6.36237170447611,0,3.88240439873782,1.10420759230197,0.484875253135222,7.45567044872489,1.17112318804619,1.25668024088073,5.10914110417183,0,0,0,25.9137806170343,76.8601012735293,281.214440028591,31.2883776346098,25.8272611903634,21.6099566341943,46.5632425004464,56.2153288453746,3.6078021476927,1.0108910337347,13.2578369208479,21.5999935318088,11.7250073261071,14.5850325142333,42.6494634475074,59.5319367574119,92.2418786050918,82.0827107143225,26.1290404446406,6.03590380211958,21.1798809787958,8.97350733236139,10.9597866213787,16.9608822027615,9.05455632957633,8.0255033199098,73.6426787228425,0,0,0,36.4541359662483,42.9182689765406,45.9158256725588,26.2786656499583,31.2855128478372,24.6827380619805,18.835249524783,16.3646774853768,13.8950757416932,13.4939076929054,10.1783827729039,9.72825714550269,10.9649990568999,11.6361561104257,8.72341721942416,11.1453672738987,50.0116416163322,6.93879444265976,4.7601101999438,146.529028117706,146.309103272076,59.2790322081629,39.1266037769284,29.131523743678,21.3052701246066,5.21981967698963,17.1286912912971,20.3581519128218,14.7227789310452,16.9618755793635,8.98819408654222,7.5648317456143,6.17337947088538,57.2797060878307,92.1985496760512,101.436962105772,80.0349718432085,71.3745152776863,43.0633934126556,52.1701431275123,25.6841657484508,21.351826986427,14.3140710149289,4.44678940630723,11.0117769772622,10.0245087507734,2.24862112384854,2.84004169943904,2.894125917029,5.60176873919124,1.43848068725405,2.59416362840057,3.56929837144506,12.9391385874619,6.32639611036456,4.68056509671841,4.2938409251009,3.94674309748207,3.37710464954357,9.42241269849684,34.1084541186873,22.1632367961155,21.7273709792241,18.0711491182147,16.5831194867398,15.9489239393629,10.9274842800367,15.4482441224067,12.8449519996289,12.118562417969,10.1595255123758,12.4333186943445,11.5719246865209,0,0,0.491764273019036,1.37968373152366,26.6513979379735,23.2079139452562,10.9836413402373,0.757412781613119,6.94118082715765,4.29482618726302,24.9891141370047,4.54040716109849,4.01037613348309,5.66153061577665,3.23848561339915,5.26060544240361,13.4397844501818,356.024018595362,23.8459343149891,60.3642396431995,48.5403138873657,88.7539261592241,21.2392221343941,61.1807203110553,43.2322686459594,27.3477365646052,19.1946230372502,28.5914687587853,23.5169746783081,25.8108947929029,21.746340081468,17.6980584444057,10.5418608574999,14.4389760547462,4.76615448055303,12.2441543941291,4.65691261617916,5.14408884075822,4.61084607469911,7.31312152168489,10.2020392773315,4.26250928760439,12.6722722354404,16.3110694565142,11.46747669885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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17536 | |||
|HGNC= | |||
|MCL_coexpression_id=985 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P97367 | |||
|association_with_transcript=0bp_to_ENSMUST00000110907,ENSMUST00000110908_5end | |||
|cluster_id=chr2:115891534..115891589,- | |||
|description=CAGE_peak_1_at_Meis2_5end | |||
|id=chr2:115891534..115891589,- | |||
|ontology_enrichment_celltype=CL:0000117!3.63e-08!23;CL:0000337!3.63e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.41e-08,23;CL:0000337,3.41e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.06e-11!333;UBERON:0000922!3.15e-10!328;UBERON:0002346!4.81e-09!71;UBERON:0003075!4.81e-09!71;UBERON:0007284!4.81e-09!71;UBERON:0002020!1.21e-08!34;UBERON:0000479!8.01e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.95e-09,92;UBERON:0002020,1.13e-08,34;UBERON:0000922,1.30e-07,320;UBERON:0002346,3.85e-07,64;UBERON:0003075,3.85e-07,64;UBERON:0007284,3.85e-07,64;UBERON:0000479,9.61e-07,349 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,3.0246421130683,2.50447864973174,0.33575854382378,1.16806320297763,0,0,0,0.171217968225505,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,10.1201515279773,0,0.522399578277871,0.319984845586813,0.68822784320151,0,0.430761996159075,0.430942465371778,0,0,0,0,0,15.8481681015439,0,0.498703936075477,0.816677425049476,0,0,0,0,0,0,3.77690453926732,4.66333883609767,6.9747765821439,0,47.7475092473178,10.1055644057857,14.1933826324227,14.1386285841616,21.5628846547457,0.167782606057736,0,0,19.0371982666601,15.1862723167541,25.7836046138721,145.87016827977,141.769582444905,162.260839297582,3.38844532069132,1.77858959222228,0.899899717281399,0.988866362566974,1.4209602298922,17.0772062995491,31.5059010363675,183.426924173697,180.50293954947,193.28863948192,47.989365379839,51.462370041726,308.799304820899,277.18510218474,375.960483723499,12.1127469099328,6.76742891851495,11.2132769277058,55.9197859976022,40.0715878978554,58.3422975023571,24.5681039121215,2.8138130501584,5.19514042441154,69.2377175863119,61.9316811476098,82.9477533922588,1.21161909333094,5.51672388779534,32.7546872232896,9.46466264679525,0,1.61910957491345,1.94932925234301,1.34408066129201,3.93244376368905,4.09032774187339,7.01422212427746,6.36011234118612,0,1.28326477414318,0,0,4.76280290224671,3.80039798212648,5.56076889516262,3.19714863213368,4.40194402200192,48.6890216132625,34.1766093729288,38.6671157456419,31.8249386213361,39.941499746445,32.3368944623188,31.9193141977376,4.20231445148436,6.36237170447611,0,3.88240439873782,1.10420759230197,0.484875253135222,7.45567044872489,1.17112318804619,1.25668024088073,5.10914110417183,0,0,0,25.9137806170343,76.8601012735293,281.214440028591,31.2883776346098,25.8272611903634,21.6099566341943,46.5632425004464,56.2153288453746,3.6078021476927,1.0108910337347,13.2578369208479,21.5999935318088,11.7250073261071,14.5850325142333,42.6494634475074,59.5319367574119,92.2418786050918,82.0827107143225,26.1290404446406,6.03590380211958,21.1798809787958,8.97350733236139,10.9597866213787,16.9608822027615,9.05455632957633,8.0255033199098,73.6426787228425,0,0,0,36.4541359662483,42.9182689765406,45.9158256725588,26.2786656499583,31.2855128478372,24.6827380619805,18.835249524783,16.3646774853768,13.8950757416932,13.4939076929054,10.1783827729039,9.72825714550269,10.9649990568999,11.6361561104257,8.72341721942416,11.1453672738987,50.0116416163322,6.93879444265976,4.7601101999438,146.529028117706,146.309103272076,59.2790322081629,39.1266037769284,29.131523743678,21.3052701246066,5.21981967698963,17.1286912912971,20.3581519128218,14.7227789310452,16.9618755793635,8.98819408654222,7.5648317456143,6.17337947088538,57.2797060878307,92.1985496760512,101.436962105772,80.0349718432085,71.3745152776863,43.0633934126556,52.1701431275123,25.6841657484508,21.351826986427,14.3140710149289,4.44678940630723,11.0117769772622,10.0245087507734,2.24862112384854,2.84004169943904,2.894125917029,5.60176873919124,1.43848068725405,2.59416362840057,3.56929837144506,12.9391385874619,6.32639611036456,4.68056509671841,4.2938409251009,3.94674309748207,3.37710464954357,9.42241269849684,34.1084541186873,22.1632367961155,21.7273709792241,18.0711491182147,16.5831194867398,15.9489239393629,10.9274842800367,15.4482441224067,12.8449519996289,12.118562417969,10.1595255123758,12.4333186943445,11.5719246865209,0,0,0.491764273019036,1.37968373152366,26.6513979379735,23.2079139452562,10.9836413402373,0.757412781613119,6.94118082715765,4.29482618726302,24.9891141370047,4.54040716109849,4.01037613348309,5.66153061577665,3.23848561339915,5.26060544240361,13.4397844501818,356.024018595362,23.8459343149891,60.3642396431995,48.5403138873657,88.7539261592241,21.2392221343941,61.1807203110553,43.2322686459594,27.3477365646052,19.1946230372502,28.5914687587853,23.5169746783081,25.8108947929029,21.746340081468,17.6980584444057,10.5418608574999,14.4389760547462,4.76615448055303,12.2441543941291,4.65691261617916,5.14408884075822,4.61084607469911,7.31312152168489,10.2020392773315,4.26250928760439,12.6722722354404,16.3110694565142,11.467476698858,1.48397627647332,6.29711264114032,4.70440814439616,3.10368094408155,1.80554989719567,7.28702091574627,12.0526446306831,0.512612642393558,32.6091251381892,16.6675074632741,2.0720530270516,1.91371918809435,2.0590035588587,0,0,0,14.3200592702267,104.390877881775,56.5228118612639,65.775252560477,48.2993963793423,39.305261474312,32.0977144395873,23.0603141473687,18.3229159388821,8.03612834409116,26.7175904627378,0,25.2682962814324,22.5023547021653,24.306398543006,21.1822110503479,15.5439635451516,13.848154160199,11.1975770965797,1.57289016638566,0.966336483304024,0.576060012515731,5.37218905067903,39.3286917662919,30.4024433207889,12.9920822977795,9.13036147904155,6.55648470778174,4.56742708175882,5.46451250545936,4.94735604745923,1.600342939755,3.2264379243789,2.92373642219257,2.88635524920988,2.68816875017609,4.98806843953465,1.10992976687032,0.269141569828427,0.3357692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| |||
|short_description=p1@Meis2 | |||
}} |
Revision as of 10:11, 6 August 2015
Short description: | p1@Meis2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Meis2_5end |
Coexpression cluster: | MCL_coexpression_mm9:985 |
Association with transcript: | 0bp_to_ENSMUST00000110907, ENSMUST00000110908_5end |
EntrezGene: | 17536 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.41e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.41e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.95e-09 | 92 |
gray matter | 1.13e-08 | 34 |
embryo | 1.30e-07 | 320 |
neurectoderm | 3.85e-07 | 64 |
neural plate | 3.85e-07 | 64 |
presumptive neural plate | 3.85e-07 | 64 |
tissue | 9.61e-07 | 349 |