FFCP PHASE1:Hg19::chr6:57127802..57127808,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4001 | |||
|description=CAGE_peak_at_chr6:57127802..57127808,- | |||
|id=chr6:57127802..57127808,- | |||
|ontology_enrichment_celltype=CL:0000055!1.38e-34!180;CL:0000057!2.37e-21!75;CL:0000680!1.66e-20!57;CL:0000056!1.66e-20!57;CL:0000355!1.66e-20!57;CL:0000187!2.65e-19!54;CL:0000192!2.19e-18!42;CL:0000514!2.19e-18!42;CL:0000359!1.11e-17!32;CL:0000048!3.45e-17!430;CL:0000183!8.48e-17!59;CL:0000723!1.61e-16!436;CL:0000393!2.38e-16!60;CL:0000211!2.38e-16!60;CL:0000034!1.18e-15!444;CL:0002620!6.48e-15!23;CL:0002371!2.30e-12!591;CL:0000144!2.39e-10!625;CL:0002556!5.59e-09!6;CL:0000222!4.81e-08!119;CL:0000548!1.03e-07!679;CL:0000004!1.03e-07!679;CL:0000255!1.03e-07!679;CL:0000012!1.59e-07!682;CL:0002570!7.75e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002594;5.26e-13;4!CL:0000359;5.89e-12;32!CL:0002620;2.19e-11;23!CL:0002595;1.66e-10;5!CL:0002556;6.27e-09;6!CL:0000057;1.03e-07;73!CL:0000192;5.34e-07;43!CL:0002570;9.83e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.41e-15,76;CL:0002594,9.78e-13,4;CL:0000359,1.26e-12,32;CL:0002620,1.78e-11,23;CL:0002595,1.24e-10,5;CL:0000192,5.12e-09,43;CL:0000514,5.12e-09,43;CL:0002556,7.40e-09,6;CL:0000048,4.55e-08,427;CL:0000723,7.24e-08,433;CL:0000034,1.32e-07,441;CL:0002570,7.57e-07,8;CL:0000187,9.82e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;5.34e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!1.45e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.74e-26!83;UBERON:0002329!8.74e-26!83;UBERON:0003077!8.74e-26!83;UBERON:0003059!8.74e-26!83;UBERON:0007282!8.74e-26!83;UBERON:0009618!8.74e-26!83;UBERON:0007285!8.74e-26!83;UBERON:0004290!1.86e-19!70;UBERON:0002385!1.03e-18!63;UBERON:0001015!1.03e-18!63;UBERON:0000383!1.03e-18!63;UBERON:0001134!1.92e-18!61;UBERON:0002036!1.92e-18!61;UBERON:0003082!1.92e-18!61;UBERON:0001637!2.96e-16!42;UBERON:0003509!2.96e-16!42;UBERON:0004572!2.96e-16!42;UBERON:0000486!6.86e-16!82;UBERON:0004573!3.78e-15!33;UBERON:0004571!3.78e-15!33;UBERON:0005256!2.08e-14!143;UBERON:0001981!5.08e-13!60;UBERON:0007500!5.08e-13!60;UBERON:0004537!5.08e-13!60;UBERON:0006965!5.08e-13!60;UBERON:0002199!3.52e-12!45;UBERON:0002416!3.52e-12!45;UBERON:0003102!6.69e-12!95;UBERON:0000055!4.51e-11!69;UBERON:0002097!9.02e-11!40;UBERON:0002049!3.97e-10!79;UBERON:0007798!3.97e-10!79;UBERON:0004872!5.08e-10!84;UBERON:0002204!2.69e-09!167;UBERON:0001758!5.59e-09!6;UBERON:0003672!5.59e-09!6;UBERON:0000490!1.19e-08!138;UBERON:0000075!9.12e-08!13;UBERON:0005944!9.12e-08!13;UBERON:0004288!9.12e-08!13;UBERON:0003089!9.12e-08!13;UBERON:0001135!1.59e-07!15;UBERON:0000475!2.11e-07!365;UBERON:0004535!3.12e-07!110;UBERON:0002100!5.99e-07!216;UBERON:0001009!8.34e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;5.26e-13;4!UBERON:0003834;1.66e-10;5!UBERON:0001533;1.66e-10;5!UBERON:0001637;3.20e-10;42!UBERON:0003509;3.20e-10;42!UBERON:0004572;3.20e-10;42!UBERON:0001758;6.27e-09;6!UBERON:0003672;6.27e-09;6!UBERON:0004573;4.42e-08;33!UBERON:0004571;4.42e-08;33!UBERON:0003129;1.02e-07;7!UBERON:0003513;1.23e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.01e-14,42;UBERON:0003509,5.01e-14,42;UBERON:0004572,5.01e-14,42;UBERON:0001310,9.78e-13,4;UBERON:0003834,1.24e-10,5;UBERON:0001533,1.24e-10,5;UBERON:0004573,7.72e-10,33;UBERON:0004571,7.72e-10,33;UBERON:0007500,2.16e-09,59;UBERON:0001981,2.16e-09,59;UBERON:0004537,2.16e-09,59;UBERON:0006965,2.16e-09,59;UBERON:0001758,7.40e-09,6;UBERON:0003672,7.40e-09,6;UBERON:0000055,6.97e-08,68;UBERON:0003513,1.00e-07,7;UBERON:0003129,1.18e-07,7;UBERON:0004872,2.62e-07,83;UBERON:0003102,4.56e-07,99;UBERON:0002199,7.76e-07,46;UBERON:0002416,7.76e-07,46 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0.247532705920093,1.32558950291166,0,0,0.730310090387373,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5234230260489,1.43418310374407,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0.323745888736263,0.421352420106746,0.61246251376468,0,0,3.56400857184616,1.48360157567134,0,0,0.505008341862199,0.125118519871964,1.38532057742091,0.877955241761676,1.22595118319608,4.6573798261045,0.453728732640084,5.202299434977,0,0.423863802319124,1.80054657650641,0.721367704669072,5.66809188100384,1.48893485065272,2.86919764810153,0.779496041289589,4.79624171063818,0.0920498986422993,0,4.26011511019937,0.302256294682921,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,1.95441710576241,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,0,0.868687840005475,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0,0,0,0,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,2.21743321237285,0,0.697262270759755,0,0,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.413509717453592,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,15.4258049947014,0,0.308033580176089,0.532306030317022,0.869932992075073,0.74129687641568,4.15062171551775,0,0,0,0,0,0.95460974377781,0.78494864019923,0.359744915166629,0.54907405947211,0.117812402345686,0.606547444719948,1.58510321173008,0.842516912477962,0,0.243713489631284,2.11300293513511,0.272999822815972,0.141405431953713,0,1.65409603063837,0,1.75380354101505,0,0,2.23201414658974,0,1.12678241012897,0.430234056612155,0.196498082026242,1.07001315444375,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0.329607748453519,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45688596480507,0.326587360109409,0,0.164185041498678,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,1.49254802886874,0.934853239388898,2.77402930751307,4.35626912132705,2.76724691927833,0,0,0.907385542579434,0,0.73927574994817,0.63718706865481,0,0.776314784381297,1.24411862352257,0.797525143673985,0,0.450772826991655,0.380805212168795,0.406870733204662,0.909243296012797,0.107410557042488,0,0.796191777397232,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23345048838675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:57127802..57127808,- | |||
}} |
Revision as of 12:28, 22 January 2014
Short description: | p@chr6:57127802..57127808, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:57127802..57127808, - |
Coexpression cluster: | C4001_Fibroblast_Smooth_mesenchymal_Mesenchymal_mesothelioma_thyroid_leiomyoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.41e-15 | 76 |
smooth muscle cell of the umbilical artery | 9.78e-13 | 4 |
vascular associated smooth muscle cell | 1.26e-12 | 32 |
skin fibroblast | 1.78e-11 | 23 |
smooth muscle cell of the subclavian artery | 1.24e-10 | 5 |
smooth muscle cell | 5.12e-09 | 43 |
smooth muscle myoblast | 5.12e-09 | 43 |
fibroblast of periodontium | 7.40e-09 | 6 |
multi fate stem cell | 4.55e-08 | 427 |
somatic stem cell | 7.24e-08 | 433 |
stem cell | 1.32e-07 | 441 |
mesenchymal stem cell of adipose | 7.57e-07 | 8 |
muscle cell | 9.82e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
artery | 5.01e-14 | 42 |
arterial blood vessel | 5.01e-14 | 42 |
arterial system | 5.01e-14 | 42 |
umbilical artery | 9.78e-13 | 4 |
thoracic segment blood vessel | 1.24e-10 | 5 |
subclavian artery | 1.24e-10 | 5 |
systemic artery | 7.72e-10 | 33 |
systemic arterial system | 7.72e-10 | 33 |
epithelial tube open at both ends | 2.16e-09 | 59 |
blood vessel | 2.16e-09 | 59 |
blood vasculature | 2.16e-09 | 59 |
vascular cord | 2.16e-09 | 59 |
periodontium | 7.40e-09 | 6 |
dentition | 7.40e-09 | 6 |
vessel | 6.97e-08 | 68 |
trunk blood vessel | 1.00e-07 | 7 |
skull | 1.18e-07 | 7 |
splanchnic layer of lateral plate mesoderm | 2.62e-07 | 83 |
surface structure | 4.56e-07 | 99 |
integument | 7.76e-07 | 46 |
integumental system | 7.76e-07 | 46 |