FFCP PHASE1:Hg19::chr6:50787466..50787500,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:50787466..50787500,+ | |||
|id=chr6:50787466..50787500,+ | |||
|ontology_enrichment_celltype=CL:0000197!5.20e-07!6;CL:0000098!5.20e-07!6;CL:0002167!5.20e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002367;1.87e-17;2!CL:0000197;5.98e-13;6!CL:0000098;5.98e-13;6!CL:0002167;5.98e-13;6!CL:0000222;4.08e-10;1!CL:0002550;5.30e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,6.82e-18,2;CL:0000197,1.06e-12,6;CL:0000098,1.06e-12,6;CL:0002167,1.06e-12,6;CL:0002550,5.31e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;5.30e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006555!1.11e-07!17;UBERON:0005103!1.11e-07!17;UBERON:0000083!1.11e-07!17;UBERON:0009201!1.11e-07!17;UBERON:0004819!1.11e-07!17;UBERON:0006553!1.11e-07!17;UBERON:0003074!1.11e-07!17;UBERON:0003060!1.11e-07!17;UBERON:0000080!3.56e-07!18;UBERON:0002120!3.56e-07!18;UBERON:0004875!3.56e-07!18;UBERON:0005721!3.56e-07!18;UBERON:0005754!3.56e-07!18;UBERON:0007297!3.56e-07!18;UBERON:0000058!4.70e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;1.87e-17;2!UBERON:0003956;1.87e-17;2!UBERON:0001831;5.30e-10;1!UBERON:0001567;5.30e-10;1!UBERON:0000996;1.36e-09;1!UBERON:0007195;1.36e-09;1!UBERON:0002331;3.30e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,6.82e-18,2;UBERON:0003956,6.82e-18,2;UBERON:0001831,5.79e-10,1;UBERON:0001567,5.79e-10,1;UBERON:0008801,5.79e-10,1;UBERON:0000996,1.36e-09,1;UBERON:0007195,2.46e-09,1;UBERON:0002331,3.14e-08,10;UBERON:0000358,3.14e-08,10;UBERON:0000307,3.14e-08,10;UBERON:0000091,3.14e-08,10;UBERON:0000087,3.14e-08,10;UBERON:0007010,3.14e-08,10;UBERON:0007806,3.14e-08,10;UBERON:0008780,3.14e-08,10;UBERON:0005728,3.14e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,2.57753575017176,0,0,0,0,0,0,0.816616685019573,0,0.516628905878827,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.100528972411631,0,1.95484983186195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.190493682876507,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,1.07057393278297,0.946214490203608,1.17141414992713,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0.501689773854853,0.764628819135115,0,1.79099803777743,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89736586882858,1.74967360122491,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,1.11136990144637,0,0,0,0,0.262379999988587,2.89999830173917,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96521128680622,1.48276726735803,2.19286093961456,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310482014706917,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78554694685953,0,0,0,0,1.389134845943,0,1.25362188757041,0,0,0,0,0,0,0,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0.169732529954025,0,0,1.67593475391973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19303106742873,0,0,0.894336993477167,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.357382720883282,0,0,0.695433089210318,0,0.828864656652147,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0,0,0,1.1218771271618,0,4.5028500772074,0,0.0757786982182394,0,0,0,0.639701945702943,0,0,0,0,0,0,0.217716747896961,0,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,1.33151354837103,0,0 | |||
|short_description=p@chr6:50787466..50787500,+ | |||
}} |
Revision as of 12:16, 22 January 2014
Short description: | p@chr6:50787466..50787500, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:50787466..50787500, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 6.82e-18 | 2 |
receptor cell | 1.06e-12 | 6 |
sensory epithelial cell | 1.06e-12 | 6 |
olfactory epithelial cell | 1.06e-12 | 6 |
fibroblast of the conjuctiva | 5.31e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 6.82e-18 | 2 |
aqueous drainage system | 6.82e-18 | 2 |
parotid gland | 5.79e-10 | 1 |
cheek | 5.79e-10 | 1 |
parotid gland primordium | 5.79e-10 | 1 |
vagina | 1.36e-09 | 1 |
stroma of bone marrow | 2.46e-09 | 1 |
umbilical cord | 3.14e-08 | 10 |
blastocyst | 3.14e-08 | 10 |
blastula | 3.14e-08 | 10 |
bilaminar disc | 3.14e-08 | 10 |
inner cell mass | 3.14e-08 | 10 |
cleaving embryo | 3.14e-08 | 10 |
connecting stalk | 3.14e-08 | 10 |
inner cell mass derived epiblast | 3.14e-08 | 10 |
extraembryonic mesoderm | 3.14e-08 | 10 |