FFCP PHASE1:Mm9::chr1:72898789..72898796,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=336|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:72898789..72898796,+|id=chr1:72898789..72898796,+|ontology_enrichment_celltype=CL:0002453!7.52e-21!8;CL:0000128!7.76e-21!6;CL:0000126!7.76e-21!6;CL:0000127!7.76e-21!6;CL:0000333!1.74e-16!10;CL:0000095!1.74e-16!10;CL:0000243!1.74e-16!10;CL:0000123!1.74e-16!10;CL:0000125!1.74e-16!10;CL:0000030!1.74e-16!10;CL:0000339!1.74e-16!10;CL:0002319!7.02e-09!43;CL:0000221!1.26e-08!44;CL:0000133!1.26e-08!44;CL:0002604!2.90e-08!2;CL:0002605!2.90e-08!2;CL:0002603!5.02e-08!2;CL:0000055!2.58e-07!50|ontology_enrichment_celltype_v019_2=CL:0000128,5.23e-52,6;CL:0000126,5.23e-52,6;CL:0000127,5.23e-52,6;CL:0002453,3.64e-39,8;CL:0000333,1.90e-31,10;CL:0000095,1.90e-31,10;CL:0000243,1.90e-31,10;CL:0000123,1.90e-31,10;CL:0000125,1.90e-31,10;CL:0000030,1.90e-31,10;CL:0000339,1.90e-31,10;CL:0002605,2.38e-26,2;CL:0002604,2.38e-26,2;CL:0002603,1.80e-25,2;CL:0002319,1.40e-07,43;CL:0000221,2.05e-07,44;CL:0000133,2.05e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.76e-13,4;UBERON:0002680,2.76e-13,4;UBERON:0001895,2.76e-13,4;UBERON:0010092,2.76e-13,4;UBERON:0006215,2.76e-13,4;UBERON:0004733,3.47e-09,6;UBERON:0004732,3.47e-09,6;UBERON:0002028,3.47e-09,6;UBERON:0007277,3.47e-09,6;UBERON:0001954,2.96e-08,7;UBERON:0003022,2.96e-08,7;UBERON:0002421,2.96e-08,7;UBERON:0000349,2.96e-08,7;UBERON:0002600,2.96e-08,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,2.61630187656536,4.17403747195497,10.6936444490856,0.55994568650145,2.87505128729943,0,0,0,0,0,0,0.404632921719196,0,0,0,0.889294796111139,0,0,0,0.898800331555214,0,0.207379224616955,0,0,0,0,0.244981598429908,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13494658742525,0.549122826376163,4.31304619582064,0,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:72898789..72898796,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=336 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:72898789..72898796,+ | |||
|description=CAGE_peak_at_chr1:72898789..72898796,+ | |||
|id=chr1:72898789..72898796,+ | |||
|ontology_enrichment_celltype=CL:0002453!7.52e-21!8;CL:0000128!7.76e-21!6;CL:0000126!7.76e-21!6;CL:0000127!7.76e-21!6;CL:0000333!1.74e-16!10;CL:0000095!1.74e-16!10;CL:0000243!1.74e-16!10;CL:0000123!1.74e-16!10;CL:0000125!1.74e-16!10;CL:0000030!1.74e-16!10;CL:0000339!1.74e-16!10;CL:0002319!7.02e-09!43;CL:0000221!1.26e-08!44;CL:0000133!1.26e-08!44;CL:0002604!2.90e-08!2;CL:0002605!2.90e-08!2;CL:0002603!5.02e-08!2;CL:0000055!2.58e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.23e-52,6;CL:0000126,5.23e-52,6;CL:0000127,5.23e-52,6;CL:0002453,3.64e-39,8;CL:0000333,1.90e-31,10;CL:0000095,1.90e-31,10;CL:0000243,1.90e-31,10;CL:0000123,1.90e-31,10;CL:0000125,1.90e-31,10;CL:0000030,1.90e-31,10;CL:0000339,1.90e-31,10;CL:0002605,2.38e-26,2;CL:0002604,2.38e-26,2;CL:0002603,1.80e-25,2;CL:0002319,1.40e-07,43;CL:0000221,2.05e-07,44;CL:0000133,2.05e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.76e-13,4;UBERON:0002680,2.76e-13,4;UBERON:0001895,2.76e-13,4;UBERON:0010092,2.76e-13,4;UBERON:0006215,2.76e-13,4;UBERON:0004733,3.47e-09,6;UBERON:0004732,3.47e-09,6;UBERON:0002028,3.47e-09,6;UBERON:0007277,3.47e-09,6;UBERON:0001954,2.96e-08,7;UBERON:0003022,2.96e-08,7;UBERON:0002421,2.96e-08,7;UBERON:0000349,2.96e-08,7;UBERON:0002600,2.96e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,2.61630187656536,4.17403747195497,10.6936444490856,0.55994568650145,2.87505128729943,0,0,0,0,0,0,0.404632921719196,0,0,0,0.889294796111139,0,0,0,0.898800331555214,0,0.207379224616955,0,0,0,0,0.244981598429908,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13494658742525,0.549122826376163,4.31304619582064,0,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:72898789..72898796,+ | |||
}} |
Latest revision as of 23:20, 5 August 2015
Short description: | p@chr1:72898789..72898796, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72898789..72898796, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.23e-52 | 6 |
macroglial cell | 5.23e-52 | 6 |
astrocyte | 5.23e-52 | 6 |
oligodendrocyte precursor cell | 3.64e-39 | 8 |
migratory neural crest cell | 1.90e-31 | 10 |
neuron associated cell | 1.90e-31 | 10 |
glial cell (sensu Vertebrata) | 1.90e-31 | 10 |
neuron associated cell (sensu Vertebrata) | 1.90e-31 | 10 |
glial cell | 1.90e-31 | 10 |
glioblast | 1.90e-31 | 10 |
glioblast (sensu Vertebrata) | 1.90e-31 | 10 |
astrocyte of the cerebral cortex | 2.38e-26 | 2 |
astrocyte of the hippocampus | 2.38e-26 | 2 |
astrocyte of the cerebellum | 1.80e-25 | 2 |
neural cell | 1.40e-07 | 43 |
ectodermal cell | 2.05e-07 | 44 |
neurectodermal cell | 2.05e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.76e-13 | 4 |
regional part of metencephalon | 2.76e-13 | 4 |
metencephalon | 2.76e-13 | 4 |
future metencephalon | 2.76e-13 | 4 |
rhombic lip | 2.76e-13 | 4 |
segmental subdivision of hindbrain | 3.47e-09 | 6 |
segmental subdivision of nervous system | 3.47e-09 | 6 |
hindbrain | 3.47e-09 | 6 |
presumptive hindbrain | 3.47e-09 | 6 |
Ammon's horn | 2.96e-08 | 7 |
lobe parts of cerebral cortex | 2.96e-08 | 7 |
hippocampal formation | 2.96e-08 | 7 |
limbic system | 2.96e-08 | 7 |
limbic lobe | 2.96e-08 | 7 |