FFCP PHASE1:Mm9::chr1:72896186..72896195,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=336|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:72896186..72896195,+|id=chr1:72896186..72896195,+|ontology_enrichment_celltype=CL:0002453!6.48e-16!8;CL:0000128!1.68e-12!6;CL:0000126!1.68e-12!6;CL:0000127!1.68e-12!6;CL:0000333!2.31e-12!10;CL:0000095!2.31e-12!10;CL:0000243!2.31e-12!10;CL:0000123!2.31e-12!10;CL:0000125!2.31e-12!10;CL:0000030!2.31e-12!10;CL:0000339!2.31e-12!10|ontology_enrichment_celltype_v019_2=CL:0002453,2.32e-44,8;CL:0000128,5.58e-44,6;CL:0000126,5.58e-44,6;CL:0000127,5.58e-44,6;CL:0000333,1.88e-35,10;CL:0000095,1.88e-35,10;CL:0000243,1.88e-35,10;CL:0000123,1.88e-35,10;CL:0000125,1.88e-35,10;CL:0000030,1.88e-35,10;CL:0000339,1.88e-35,10;CL:0002605,2.90e-16,2;CL:0002604,2.90e-16,2;CL:0002603,4.86e-16,2;CL:0002319,6.01e-08,43;CL:0000221,9.35e-08,44;CL:0000133,9.35e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.03e-10!22;UBERON:0007499!3.03e-10!22;UBERON:0006925!3.03e-10!22;UBERON:0009497!3.03e-10!22;UBERON:0000015!3.03e-10!22;UBERON:0002423!3.03e-10!22;UBERON:0006235!3.03e-10!22;UBERON:0008835!3.03e-10!22;UBERON:0003894!3.03e-10!22;UBERON:0004161!3.03e-10!22;UBERON:0008836!3.03e-10!22;UBERON:0009854!1.14e-09!23;UBERON:0009856!1.14e-09!23;UBERON:0002365!1.17e-08!25;UBERON:0002330!1.17e-08!25|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.75e-08,4;UBERON:0002680,1.75e-08,4;UBERON:0001895,1.75e-08,4;UBERON:0010092,1.75e-08,4;UBERON:0006215,1.75e-08,4;UBERON:0002107,2.15e-08,22;UBERON:0007499,2.15e-08,22;UBERON:0006925,2.15e-08,22;UBERON:0009497,2.15e-08,22;UBERON:0000015,2.15e-08,22;UBERON:0002423,2.15e-08,22;UBERON:0006235,2.15e-08,22;UBERON:0008835,2.15e-08,22;UBERON:0003894,2.15e-08,22;UBERON:0004161,2.15e-08,22;UBERON:0008836,2.15e-08,22;UBERON:0009854,5.01e-08,23;UBERON:0009856,5.01e-08,23;UBERON:0002365,2.22e-07,25;UBERON:0002330,2.22e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,2.39827672018491,3.29529274101708,9.13820525649132,1.1198913730029,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,1.15265491596466,0,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0.130120442962704,0.459804208866946,0.360124259610698,0,0,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,2.10775794807546,0.549122826376163,8.62609239164127,2.23284568601102,1.5601883655728,0.252578877947112,0.179397413521912,1.4473305640901,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p@chr1:72896186..72896195,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=336 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:72896186..72896195,+ | |||
|description=CAGE_peak_at_chr1:72896186..72896195,+ | |||
|id=chr1:72896186..72896195,+ | |||
|ontology_enrichment_celltype=CL:0002453!6.48e-16!8;CL:0000128!1.68e-12!6;CL:0000126!1.68e-12!6;CL:0000127!1.68e-12!6;CL:0000333!2.31e-12!10;CL:0000095!2.31e-12!10;CL:0000243!2.31e-12!10;CL:0000123!2.31e-12!10;CL:0000125!2.31e-12!10;CL:0000030!2.31e-12!10;CL:0000339!2.31e-12!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.32e-44,8;CL:0000128,5.58e-44,6;CL:0000126,5.58e-44,6;CL:0000127,5.58e-44,6;CL:0000333,1.88e-35,10;CL:0000095,1.88e-35,10;CL:0000243,1.88e-35,10;CL:0000123,1.88e-35,10;CL:0000125,1.88e-35,10;CL:0000030,1.88e-35,10;CL:0000339,1.88e-35,10;CL:0002605,2.90e-16,2;CL:0002604,2.90e-16,2;CL:0002603,4.86e-16,2;CL:0002319,6.01e-08,43;CL:0000221,9.35e-08,44;CL:0000133,9.35e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.03e-10!22;UBERON:0007499!3.03e-10!22;UBERON:0006925!3.03e-10!22;UBERON:0009497!3.03e-10!22;UBERON:0000015!3.03e-10!22;UBERON:0002423!3.03e-10!22;UBERON:0006235!3.03e-10!22;UBERON:0008835!3.03e-10!22;UBERON:0003894!3.03e-10!22;UBERON:0004161!3.03e-10!22;UBERON:0008836!3.03e-10!22;UBERON:0009854!1.14e-09!23;UBERON:0009856!1.14e-09!23;UBERON:0002365!1.17e-08!25;UBERON:0002330!1.17e-08!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.75e-08,4;UBERON:0002680,1.75e-08,4;UBERON:0001895,1.75e-08,4;UBERON:0010092,1.75e-08,4;UBERON:0006215,1.75e-08,4;UBERON:0002107,2.15e-08,22;UBERON:0007499,2.15e-08,22;UBERON:0006925,2.15e-08,22;UBERON:0009497,2.15e-08,22;UBERON:0000015,2.15e-08,22;UBERON:0002423,2.15e-08,22;UBERON:0006235,2.15e-08,22;UBERON:0008835,2.15e-08,22;UBERON:0003894,2.15e-08,22;UBERON:0004161,2.15e-08,22;UBERON:0008836,2.15e-08,22;UBERON:0009854,5.01e-08,23;UBERON:0009856,5.01e-08,23;UBERON:0002365,2.22e-07,25;UBERON:0002330,2.22e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,2.39827672018491,3.29529274101708,9.13820525649132,1.1198913730029,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,1.15265491596466,0,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0.130120442962704,0.459804208866946,0.360124259610698,0,0,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,2.10775794807546,0.549122826376163,8.62609239164127,2.23284568601102,1.5601883655728,0.252578877947112,0.179397413521912,1.4473305640901,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr1:72896186..72896195,+ | |||
}} |
Latest revision as of 23:18, 5 August 2015
Short description: | p@chr1:72896186..72896195, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72896186..72896195, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.32e-44 | 8 |
oligodendrocyte | 5.58e-44 | 6 |
macroglial cell | 5.58e-44 | 6 |
astrocyte | 5.58e-44 | 6 |
migratory neural crest cell | 1.88e-35 | 10 |
neuron associated cell | 1.88e-35 | 10 |
glial cell (sensu Vertebrata) | 1.88e-35 | 10 |
neuron associated cell (sensu Vertebrata) | 1.88e-35 | 10 |
glial cell | 1.88e-35 | 10 |
glioblast | 1.88e-35 | 10 |
glioblast (sensu Vertebrata) | 1.88e-35 | 10 |
astrocyte of the cerebral cortex | 2.90e-16 | 2 |
astrocyte of the hippocampus | 2.90e-16 | 2 |
astrocyte of the cerebellum | 4.86e-16 | 2 |
neural cell | 6.01e-08 | 43 |
ectodermal cell | 9.35e-08 | 44 |
neurectodermal cell | 9.35e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.75e-08 | 4 |
regional part of metencephalon | 1.75e-08 | 4 |
metencephalon | 1.75e-08 | 4 |
future metencephalon | 1.75e-08 | 4 |
rhombic lip | 1.75e-08 | 4 |
liver | 2.15e-08 | 22 |
epithelial sac | 2.15e-08 | 22 |
digestive gland | 2.15e-08 | 22 |
epithelium of foregut-midgut junction | 2.15e-08 | 22 |
anatomical boundary | 2.15e-08 | 22 |
hepatobiliary system | 2.15e-08 | 22 |
foregut-midgut junction | 2.15e-08 | 22 |
hepatic diverticulum | 2.15e-08 | 22 |
liver primordium | 2.15e-08 | 22 |
septum transversum | 2.15e-08 | 22 |
liver bud | 2.15e-08 | 22 |
digestive tract diverticulum | 5.01e-08 | 23 |
sac | 5.01e-08 | 23 |
exocrine gland | 2.22e-07 | 25 |
exocrine system | 2.22e-07 | 25 |