FFCP PHASE1:Hg19::chr6:37400974..37401011,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23070 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21077 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N1G2,Q5T7F5 | |||
|association_with_transcript=0bp_to_ENST00000373451,ENST00000455891,ENST00000471097_5end | |||
|description=CAGE_peak_1_at_FTSJD2_5end | |||
|id=chr6:37400974..37401011,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!5.60e-09!86;UBERON:0007284!5.60e-09!86;UBERON:0002346!1.13e-08!90;UBERON:0000119!1.52e-08!312;UBERON:0000483!1.81e-08!309;UBERON:0000475!1.96e-08!365;UBERON:0000025!5.15e-08!194;UBERON:0002616!2.90e-07!59;UBERON:0001049!3.54e-07!57;UBERON:0005068!3.54e-07!57;UBERON:0006241!3.54e-07!57;UBERON:0007135!3.54e-07!57;UBERON:0000955!3.66e-07!69;UBERON:0006238!3.66e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,1.96e-08,82;UBERON:0007284,1.96e-08,82;UBERON:0000073,2.69e-08,53;UBERON:0002616,2.69e-08,53;UBERON:0000119,2.91e-08,309;UBERON:0000483,3.46e-08,306;UBERON:0002346,3.90e-08,86;UBERON:0000025,3.99e-08,192;UBERON:0001049,1.02e-07,56;UBERON:0005068,1.02e-07,56;UBERON:0006241,1.02e-07,56;UBERON:0007135,1.02e-07,56;UBERON:0000955,1.22e-07,68;UBERON:0006238,1.22e-07,68;UBERON:0010314,1.51e-07,132;UBERON:0010371,2.25e-07,104 | |||
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| |||
|short_description=p1@FTSJD2 | |||
}} |
Revision as of 11:44, 22 January 2014
Short description: | p1@FTSJD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FTSJD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373451, ENST00000455891, ENST00000471097_5end |
EntrezGene: | FTSJD2 |
HGNC: | 21077 |
UniProt: | Q8N1G2Q5T7F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 1.96e-08 | 82 |
presumptive neural plate | 1.96e-08 | 82 |
regional part of nervous system | 2.69e-08 | 53 |
regional part of brain | 2.69e-08 | 53 |
cell layer | 2.91e-08 | 309 |
epithelium | 3.46e-08 | 306 |
neurectoderm | 3.90e-08 | 86 |
tube | 3.99e-08 | 192 |
neural tube | 1.02e-07 | 56 |
neural rod | 1.02e-07 | 56 |
future spinal cord | 1.02e-07 | 56 |
neural keel | 1.02e-07 | 56 |
brain | 1.22e-07 | 68 |
future brain | 1.22e-07 | 68 |
structure with developmental contribution from neural crest | 1.51e-07 | 132 |
ecto-epithelium | 2.25e-07 | 104 |