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FFCP PHASE1:Mm9::chr1:57434437..57434533,+: Difference between revisions

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{{FFCP|EntrezGene=73467|HGNC=|MCL_coexpression_id=60|UniProt=Q9D9H8|association_with_transcript=0bp_to_ENSMUST00000042734,NM_028546,uc007bay.2_5end|description=CAGE_peak_1_at_1700066M21Rik_5end|id=chr1:57434437..57434533,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.78e-10!52;UBERON:0005068!1.78e-10!52;UBERON:0006241!1.78e-10!52;UBERON:0007135!1.78e-10!52;UBERON:0002020!2.05e-10!34;UBERON:0000955!1.14e-09!50;UBERON:0006238!1.14e-09!50;UBERON:0002616!2.14e-09!49;UBERON:0000025!4.35e-09!114;UBERON:0001017!1.20e-08!73;UBERON:0005743!1.20e-08!73;UBERON:0000073!1.66e-08!75;UBERON:0001016!1.66e-08!75;UBERON:0002791!2.14e-08!29;UBERON:0003528!2.14e-08!29;UBERON:0001893!2.14e-08!29;UBERON:0002346!4.08e-08!71;UBERON:0003075!4.08e-08!71;UBERON:0007284!4.08e-08!71;UBERON:0000033!2.08e-07!63;UBERON:0004111!2.35e-07!122;UBERON:0003080!3.90e-07!40;UBERON:0000956!5.15e-07!21;UBERON:0001869!5.15e-07!21;UBERON:0000203!5.15e-07!21;UBERON:0002021!9.03e-07!10;UBERON:0000411!9.03e-07!10;UBERON:0001950!9.03e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.37e-11,54;UBERON:0001049,1.78e-10,52;UBERON:0005068,1.78e-10,52;UBERON:0006241,1.78e-10,52;UBERON:0007135,1.78e-10,52;UBERON:0002020,2.05e-10,34;UBERON:0002346,2.83e-09,64;UBERON:0003075,2.83e-09,64;UBERON:0007284,2.83e-09,64;UBERON:0000025,4.35e-09,114;UBERON:0001017,1.20e-08,73;UBERON:0001016,1.66e-08,75;UBERON:0003528,2.14e-08,29;UBERON:0002791,2.14e-08,29;UBERON:0001893,2.14e-08,29;UBERON:0000955,2.55e-08,47;UBERON:0006238,2.55e-08,47;UBERON:0010371,2.68e-08,73;UBERON:0002616,4.66e-08,46;UBERON:0004111,2.35e-07,122;UBERON:0003080,3.90e-07,40;UBERON:0000956,5.15e-07,21;UBERON:0001869,5.15e-07,21;UBERON:0000203,5.15e-07,21;UBERON:0002021,9.03e-07,10;UBERON:0000411,9.03e-07,10;UBERON:0001950,9.03e-07,10;UBERON:0004121,9.86e-07,95;UBERON:0000924,9.86e-07,95;UBERON:0006601,9.86e-07,95|phase1_expression=5.44506080156299,1.04692622291808,0,2.41971369045464,3.00537437967808,2.01455126294268,3.27057696833736,4.00282302668886,3.09735188733667,1.87251621057595,3.08192342805909,1.99430397488341,9.0736386863539,2.18551006047494,4.99664642723494,7.28910962603373,6.99561878128147,7.72882305127682,8.63820931716154,11.8829102503448,13.1817099734158,7.04965753526286,6.26879493933445,1.91990907352088,1.60586496747019,0,2.15380998079537,1.939241094173,1.52018735565099,2.77233142735924,3.10422714917427,4.44521471421742,3.69038872550742,0,3.75507105676657,5.98444723290572,5.3084032628216,8.37063261473815,10.1573594788094,9.42342739152837,12.3528612486513,11.6117732442936,8.73918635456076,6.79842817068117,6.18399280439039,6.24058957349717,7.04152209913235,3.92445281484804,3.51497892375155,3.4997381833371,5.17949760013841,7.18762821824858,6.87908684836719,0.725362142011344,4.03312558970957,3.60163210450326,5.15760191889762,5.67239301505187,8.09265843438391,3.1739458756322,5.07065122804943,3.38844532069132,4.4464739805557,2.6996991518442,1.97773272513395,4.2628806896766,6.5912024314049,7.68436610643109,21.3600601355464,12.1505344498522,14.9330722559481,13.4255962669788,11.7060326704355,10.2892271340561,6.61333750025831,6.43453150627015,22.0231761998777,18.386976684267,19.9688493233117,6.4624280987795,7.13603620098795,6.25096044668112,13.6799669510677,11.8180148106653,14.8214300343506,18.8562294703147,19.5049202694771,9.13357284543973,5.98236927332154,7.48158445057177,3.47837386442013,12.0459342777394,4.75979933595425,27.5248627735287,30.5394916200404,23.2973981290615,7.3031098468511,9.88495870952735,5.71529210126311,8.48014978824817,4.92951969218382,3.84979432242953,5.09610479413291,0,6.49473123033642,6.58735650235256,9.60496445528088,12.5602267690966,5.95557132388495,7.12522267511159,6.7659277438793,3.34912026143355,5.76538743140146,7.08396410597326,4.9387256996996,9.04799457573663,2.22475470960936,5.92857363371638,5.30766331169925,7.27950824763341,9.27534377533653,12.1218813283806,7.45567044872489,13.1751358655196,9.21565509979202,4.34276993854605,5.39168060276641,9.59844369589452,8.00542430560307,25.0150367806054,19.2150253183823,17.0889918873496,26.9427696298029,25.0601148183724,22.0255327233134,20.4423991465375,6.00852246716866,9.20611582514688,11.8779696463827,6.31325567659422,4.55421550369463,4.82794419310293,7.38254732201932,6.17889753126432,8.77670839052129,9.60852902136373,9.37017245597288,5.69147415625834,3.88022387279116,5.29497024469894,4.92663147659057,7.89104636739269,6.95118123063995,5.57203466435466,7.61393904709391,4.57778813682534,8.42655824775882,5.66165395652373,9.94572247884574,4.97101854085205,5.62862543954631,5.94204802821349,4.49814997611899,4.9191057936851,5.707883176833,7.44108623201305,7.77992864058896,7.58974725386602,4.60767579757745,4.43252153013557,4.62092214411378,4.5321996101853,5.48875288227627,4.96563749413376,22.9216043934899,16.9792610425819,4.29544417878937,4.7601101999438,6.18535926552179,6.50262681209228,5.4124333755279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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:73467
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=uniprot:Q9D9H8
|association_with_transcript=0bp_to_ENSMUST00000042734,NM_028546,uc007bay.2_5end
|cluster_id=chr1:57434437..57434533,+
|description=CAGE_peak_1_at_1700066M21Rik_5end
|id=chr1:57434437..57434533,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.78e-10!52;UBERON:0005068!1.78e-10!52;UBERON:0006241!1.78e-10!52;UBERON:0007135!1.78e-10!52;UBERON:0002020!2.05e-10!34;UBERON:0000955!1.14e-09!50;UBERON:0006238!1.14e-09!50;UBERON:0002616!2.14e-09!49;UBERON:0000025!4.35e-09!114;UBERON:0001017!1.20e-08!73;UBERON:0005743!1.20e-08!73;UBERON:0000073!1.66e-08!75;UBERON:0001016!1.66e-08!75;UBERON:0002791!2.14e-08!29;UBERON:0003528!2.14e-08!29;UBERON:0001893!2.14e-08!29;UBERON:0002346!4.08e-08!71;UBERON:0003075!4.08e-08!71;UBERON:0007284!4.08e-08!71;UBERON:0000033!2.08e-07!63;UBERON:0004111!2.35e-07!122;UBERON:0003080!3.90e-07!40;UBERON:0000956!5.15e-07!21;UBERON:0001869!5.15e-07!21;UBERON:0000203!5.15e-07!21;UBERON:0002021!9.03e-07!10;UBERON:0000411!9.03e-07!10;UBERON:0001950!9.03e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.37e-11,54;UBERON:0001049,1.78e-10,52;UBERON:0005068,1.78e-10,52;UBERON:0006241,1.78e-10,52;UBERON:0007135,1.78e-10,52;UBERON:0002020,2.05e-10,34;UBERON:0002346,2.83e-09,64;UBERON:0003075,2.83e-09,64;UBERON:0007284,2.83e-09,64;UBERON:0000025,4.35e-09,114;UBERON:0001017,1.20e-08,73;UBERON:0001016,1.66e-08,75;UBERON:0003528,2.14e-08,29;UBERON:0002791,2.14e-08,29;UBERON:0001893,2.14e-08,29;UBERON:0000955,2.55e-08,47;UBERON:0006238,2.55e-08,47;UBERON:0010371,2.68e-08,73;UBERON:0002616,4.66e-08,46;UBERON:0004111,2.35e-07,122;UBERON:0003080,3.90e-07,40;UBERON:0000956,5.15e-07,21;UBERON:0001869,5.15e-07,21;UBERON:0000203,5.15e-07,21;UBERON:0002021,9.03e-07,10;UBERON:0000411,9.03e-07,10;UBERON:0001950,9.03e-07,10;UBERON:0004121,9.86e-07,95;UBERON:0000924,9.86e-07,95;UBERON:0006601,9.86e-07,95
|phase1_expression=5.44506080156299,1.04692622291808,0,2.41971369045464,3.00537437967808,2.01455126294268,3.27057696833736,4.00282302668886,3.09735188733667,1.87251621057595,3.08192342805909,1.99430397488341,9.0736386863539,2.18551006047494,4.99664642723494,7.28910962603373,6.99561878128147,7.72882305127682,8.63820931716154,11.8829102503448,13.1817099734158,7.04965753526286,6.26879493933445,1.91990907352088,1.60586496747019,0,2.15380998079537,1.939241094173,1.52018735565099,2.77233142735924,3.10422714917427,4.44521471421742,3.69038872550742,0,3.75507105676657,5.98444723290572,5.3084032628216,8.37063261473815,10.1573594788094,9.42342739152837,12.3528612486513,11.6117732442936,8.73918635456076,6.79842817068117,6.18399280439039,6.24058957349717,7.04152209913235,3.92445281484804,3.51497892375155,3.4997381833371,5.17949760013841,7.18762821824858,6.87908684836719,0.725362142011344,4.03312558970957,3.60163210450326,5.15760191889762,5.67239301505187,8.09265843438391,3.1739458756322,5.07065122804943,3.38844532069132,4.4464739805557,2.6996991518442,1.97773272513395,4.2628806896766,6.5912024314049,7.68436610643109,21.3600601355464,12.1505344498522,14.9330722559481,13.4255962669788,11.7060326704355,10.2892271340561,6.61333750025831,6.43453150627015,22.0231761998777,18.386976684267,19.9688493233117,6.4624280987795,7.13603620098795,6.25096044668112,13.6799669510677,11.8180148106653,14.8214300343506,18.8562294703147,19.5049202694771,9.13357284543973,5.98236927332154,7.48158445057177,3.47837386442013,12.0459342777394,4.75979933595425,27.5248627735287,30.5394916200404,23.2973981290615,7.3031098468511,9.88495870952735,5.71529210126311,8.48014978824817,4.92951969218382,3.84979432242953,5.09610479413291,0,6.49473123033642,6.58735650235256,9.60496445528088,12.5602267690966,5.95557132388495,7.12522267511159,6.7659277438793,3.34912026143355,5.76538743140146,7.08396410597326,4.9387256996996,9.04799457573663,2.22475470960936,5.92857363371638,5.30766331169925,7.27950824763341,9.27534377533653,12.1218813283806,7.45567044872489,13.1751358655196,9.21565509979202,4.34276993854605,5.39168060276641,9.59844369589452,8.00542430560307,25.0150367806054,19.2150253183823,17.0889918873496,26.9427696298029,25.0601148183724,22.0255327233134,20.4423991465375,6.00852246716866,9.20611582514688,11.8779696463827,6.31325567659422,4.55421550369463,4.82794419310293,7.38254732201932,6.17889753126432,8.77670839052129,9.60852902136373,9.37017245597288,5.69147415625834,3.88022387279116,5.29497024469894,4.92663147659057,7.89104636739269,6.95118123063995,5.57203466435466,7.61393904709391,4.57778813682534,8.42655824775882,5.66165395652373,9.94572247884574,4.97101854085205,5.62862543954631,5.94204802821349,4.49814997611899,4.9191057936851,5.707883176833,7.44108623201305,7.77992864058896,7.58974725386602,4.60767579757745,4.43252153013557,4.62092214411378,4.5321996101853,5.48875288227627,4.96563749413376,22.9216043934899,16.9792610425819,4.29544417878937,4.7601101999438,6.18535926552179,6.50262681209228,5.41243337552792,6.45387278794696,5.78182913996663,7.98947629672748,6.64340686162316,4.6115707322723,5.52937459360593,4.97391180102877,5.45899443933536,4.49409704327111,4.10662294761919,3.38540164532424,3.03468641524931,6.28366819353509,7.88954149711563,5.90588850751411,4.07300223052014,6.87331034925122,8.91635173452028,5.60918562322488,7.69293766422737,10.3653617694312,27.5700943191048,8.3422552858047,7.46924181430171,8.54476027062444,8.11440485554012,8.92355491083942,9.93040821947537,5.17853047411459,7.13394997810156,13.453509246216,23.0029130443767,12.2806512730606,12.4815069245824,23.9949934049756,23.1422663443267,23.639732546805,5.54259570499814,8.33762211790133,7.65935389277522,6.95954851678271,9.38760993154008,7.37027532743989,7.14130922658041,5.65887578787617,7.88175720530955,7.0868700687608,7.65382889555938,4.91589944147214,6.56202931090403,5.93061140184197,9.04747703635634,5.98296252200581,8.35999264132362,4.41498794087572,25.0458920380955,25.0833009307315,10.3279015587306,9.08895337935743,8.83423014365519,4.29482618726302,8.18608911384636,4.54040716109849,5.79276552614225,6.51076020814315,5.66734982344852,7.89090816360542,5.13874111330481,9.3183181762324,4.9679029822894,3.02711526234334,5.37526965866801,5.93892442701128,5.30980553359851,3.8844901784797,6.34879469625977,7.35559811048003,4.72483028609236,5.84126781093462,4.13485269069154,6.90714086007261,4.63446591900138,3.79244109522979,4.21674434299995,7.21948802737308,10.2131881726136,5.40183282093931,2.32845630808958,4.28674070063185,6.20690817747958,5.70780216326626,6.74650984468696,6.39376393140658,6.8054795338476,3.60114520468494,6.17479514553893,3.79238381765404,7.58882805470756,8.50412241486998,7.16234064018819,10.3408766839389,2.91480836629851,26.7012434895134,6.4930934703184,5.98521917093345,6.11141940320049,6.78126445216888,7.51818252465638,7.32090154260872,6.62915876976036,6.15786390224095,7.46279858543889,8.59203556213602,7.11755985557555,7.5228202836934,7.88438987999149,5.22720740036172,5.02233896616208,8.76618251501335,8.01738520535759,12.8260411572175,4.92536898508813,6.21339313086926,49.6049786042087,5.23307911153926,7.44563207056939,5.83353565032143,5.16639293910924,7.26511339610346,6.80671984145373,8.72369378454466,9.75191903159111,33.8217769156408,35.7157207759753,6.95224465381992,5.6763060281246,3.90301637226344,4.54722880422283,4.29664069601955,3.17890167650024,6.85114062263822,7.23678683155428,5.95702054694071,6.55378537232999,7.4611377001262,7.50425681696094,6.44619338990207,5.96072201126002,4.98806843953465,3.99574716073316,7.44625009858648,3.35769232728157,6.18206700903009,3.56596703357246,4.94509385521616,4.71610433973945,4.51414893631827,24.2843292325339,19.7939851698086,13.1765968091061,24.2312987104599,19.8673930733486,22.661816921691,16.8755625057951,22.516060161211,22.203978040226,13.9795284172991,6.84996494055566,8.77854721482268,7.68301225893604,8.99494853152688,7.33646069197938,9.19217542250071,5.778414922842,6.18105171716683,9.62757628775446,8.08631077644152,7.60437899670719,10.1858224348481,7.02311306024118,7.55496798377458,7.75378830900779,7.1444053692461,6.95305955669133,8.10218725947561,5.35711671044299,7.65434384698866,5.14303878578123,7.0990322463735,7.15308569841963,10.174249164263,7.0582035311498,7.61531471025089,7.68297486065645,7.10288220882176,6.65440157844723,7.85599180320834,7.11810108745045,9.1609168609274,7.36615877705441,8.83139994760006,8.29498427218908,7.74412791607632,8.4215379040347,8.37997110788363,5.35607329792761,9.70602244125868,10.434052602919
|short_description=p1@1700066M21Rik
}}

Revision as of 18:58, 5 August 2015

Short description:p1@1700066M21Rik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_1700066M21Rik_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000042734, NM_028546, uc007bay.2_5end
EntrezGene:73467
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@1700066M21Rik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.07
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.29
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.64
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.27
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.97
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.50
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D95.98
Mouse Schwann, donor2.CNhs12573.11746-123F97.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C827.52
Mouse hepatocyte, donor6.CNhs13090.11822-124F430.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F623.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.56
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D77.13
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C14.94
adrenal gland, neonate N25.CNhs11223.1377-27I39.05
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H15.93
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F57.28
bone (os femoris), neonate N16.CNhs11225.1525-43A69.28
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.01
corpora quadrigemina, adult.CNhs10501.16-22A425.02
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F117.09
cortex, adult.CNhs10473.12-14D526.94
cortex, neonate N30.CNhs11107.1392-42F225.06
diencephalon, adult.CNhs10482.20-12F222.03
diencephalon, neonate N30.CNhs11201.1388-42B220.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.21
epididymis, adult.CNhs10490.58-23B211.88
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C64.55
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C68.78
eyeball, neonate N01.CNhs11140.1532-43E79.61
eyeball, neonate N02.CNhs11205.1551-44G89.37
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E76.95
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B57.61
gonad, embryo E13.CNhs11044.1564-45I64.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.95
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E37.59
heart, neonate N03.CNhs11221.1349-25I24.61
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G14.62
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D35.49
heart, neonate N30.CNhs11202.1390-42D24.97
hippocampus, adult.CNhs10478.13-16E822.92
hippocampus, neonate N00.CNhs11228.627-43G116.98
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D85.41
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F24.97
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F86.28
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.91
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G76.87
kidney, neonate N10.CNhs11206.758-6D58.92
kidney, neonate N20.CNhs11113.832-19I15.61
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H110.37
liver, adult pregnant day01.CNhs10466.508-5B227.57
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H67.47
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D78.11
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A39.93
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F47.13
liver, neonate N03.CNhs11123.1345-25G213.45
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H212.28
liver, neonate N10.CNhs11115.751-24B912.48
liver, neonate N20.CNhs11220.823-25A323.99
liver, neonate N25.CNhs11198.1368-26H123.14
liver, neonate N30.CNhs11106.1382-42D123.64
lung, adult.CNhs10474.28-22B15.54
lung, embryo E12.CNhs10522.354-16G28.34
lung, embryo E14.CNhs10604.404-26F87.66
lung, embryo E15.CNhs11020.432-17C56.96
lung, embryo E16.CNhs10998.458-17B69.39
lung, embryo E17.CNhs10605.480-44A67.37
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E57.88
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E67.65
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H25.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C225.05
medulla oblongata, neonate N30.CNhs11200.1396-42A325.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I74.97
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I45.38
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E57.36
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B96.21
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F56.75
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I76.81
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G47.59
skin, neonate N03.CNhs11215.662-22H38.50
skin, neonate N06.CNhs11097.693-20I57.16
skin, neonate N10.CNhs11108.762-6C410.34
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C926.70
spleen, adult.CNhs10465.25-2G26.49
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H17.52
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.46
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E37.12
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D47.88
stomach, embryo E17.CNhs11006.1035-18D55.23
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B88.77
stomach, neonate N07.CNhs11210.718-18A98.02
stomach, neonate N25.CNhs11104.1355-25E412.83
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G549.60
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C57.45
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I55.17
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B76.81
testis, neonate N07.CNhs11222.726-26I48.72
testis, neonate N10.CNhs11204.763-44D99.75
testis, neonate N20.CNhs11110.839-18H333.82
testis, neonate N30.CNhs11130.1391-42E235.72
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I23.90
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F86.85
thymus, neonate N03.CNhs11137.2104-43C77.24
thymus, neonate N06.CNhs11197.681-26C45.96
thymus, neonate N07.CNhs11211.713-19D36.55
thymus, neonate N10.CNhs11194.748-24E47.46
thymus, neonate N20.CNhs11186.820-7A27.50
thymus, neonate N25.CNhs11125.1362-25G76.45
thymus, neonate N30.CNhs11132.1393-42G25.96
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E54.95
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.28
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.20
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I86.85
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H27.68
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F29.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.83
whole body, embryo E17.5.CNhs10513.490-9F98.29
whole body, embryo E17.CNhs10517.475-3I57.74
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B410.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.37e-1154
neural tube1.78e-1052
neural rod1.78e-1052
future spinal cord1.78e-1052
neural keel1.78e-1052
gray matter2.05e-1034
neurectoderm2.83e-0964
neural plate2.83e-0964
presumptive neural plate2.83e-0964
tube4.35e-09114
central nervous system1.20e-0873
nervous system1.66e-0875
brain grey matter2.14e-0829
regional part of telencephalon2.14e-0829
telencephalon2.14e-0829
brain2.55e-0847
future brain2.55e-0847
ecto-epithelium2.68e-0873
regional part of brain4.66e-0846
anatomical conduit2.35e-07122
anterior neural tube3.90e-0740
cerebral cortex5.15e-0721
cerebral hemisphere5.15e-0721
pallium5.15e-0721
occipital lobe9.03e-0710
visual cortex9.03e-0710
neocortex9.03e-0710
ectoderm-derived structure9.86e-0795
ectoderm9.86e-0795
presumptive ectoderm9.86e-0795
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