FFCP PHASE1:Hg19::chr6:33385655..33385719,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51596 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21101 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000465956_5end | |||
|coexpression_cluster_id=C887 | |||
|description=CAGE_peak_1_at_CUTA_5end | |||
|id=chr6:33385655..33385719,- | |||
|ontology_enrichment_celltype=CL:0000012!3.67e-35!682;CL:0000548!5.33e-35!679;CL:0000004!5.33e-35!679;CL:0000255!5.33e-35!679;CL:0000055!1.94e-34!180;CL:0000144!1.60e-27!625;CL:0002371!3.43e-25!591;CL:0000003!1.14e-21!722;CL:0000192!6.26e-20!42;CL:0000514!6.26e-20!42;CL:0000183!6.33e-20!59;CL:0002321!9.00e-19!248;CL:0000220!9.58e-19!246;CL:0000680!1.60e-18!57;CL:0000056!1.60e-18!57;CL:0000355!1.60e-18!57;CL:0000393!3.44e-18!60;CL:0000211!3.44e-18!60;CL:0000187!5.19e-18!54;CL:0000359!2.03e-15!32;CL:0000222!8.97e-14!119;CL:0000057!8.78e-10!75;CL:0000034!2.11e-08!444;CL:0000723!3.81e-08!436;CL:0000048!6.51e-08!430;CL:0000221!8.57e-08!71;CL:0000063!2.56e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.76e-15;32!CL:0000192;4.32e-14;43!CL:0000187;8.71e-10;55!CL:0000393;3.99e-09;61!CL:0000211;3.99e-09;61!CL:0000134;9.00e-09;55!CL:0000048;9.60e-08;58!CL:0000723;2.87e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.20e-19,43;CL:0000514,1.20e-19,43;CL:0002321,1.13e-18,250;CL:0000680,2.36e-18,58;CL:0000056,2.36e-18,58;CL:0000355,2.36e-18,58;CL:0000393,4.89e-18,61;CL:0000211,4.89e-18,61;CL:0000187,7.77e-18,55;CL:0000359,2.03e-15,32;CL:0000222,1.37e-13,121;CL:0000057,6.20e-10,76;CL:0000034,2.66e-08,441;CL:0000221,3.65e-08,72;CL:0000723,4.75e-08,433;CL:0000048,8.07e-08,427 | |||
|ontology_enrichment_development_v019=CL:0000514;4.32e-14;43!CL:0000355;1.17e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.94e-19!83;UBERON:0002329!1.94e-19!83;UBERON:0003077!1.94e-19!83;UBERON:0003059!1.94e-19!83;UBERON:0007282!1.94e-19!83;UBERON:0009618!1.94e-19!83;UBERON:0007285!1.94e-19!83;UBERON:0000486!7.17e-19!82;UBERON:0004290!1.21e-17!70;UBERON:0005256!1.72e-17!143;UBERON:0001134!7.64e-16!61;UBERON:0002036!7.64e-16!61;UBERON:0003082!7.64e-16!61;UBERON:0002385!1.74e-14!63;UBERON:0001015!1.74e-14!63;UBERON:0000383!1.74e-14!63;UBERON:0002100!7.06e-13!216;UBERON:0003104!4.05e-12!238;UBERON:0009142!4.05e-12!238;UBERON:0000490!2.75e-08!138;UBERON:0001637!2.91e-08!42;UBERON:0003509!2.91e-08!42;UBERON:0004572!2.91e-08!42;UBERON:0004573!2.78e-07!33;UBERON:0004571!2.78e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.79e-19,78;UBERON:0000486,9.02e-19,83;UBERON:0002329,1.58e-17,71;UBERON:0003059,1.58e-17,71;UBERON:0007282,1.58e-17,71;UBERON:0004290,1.58e-17,71;UBERON:0009618,1.58e-17,71;UBERON:0007524,5.36e-17,73;UBERON:0003077,1.21e-16,72;UBERON:0007285,1.21e-16,72;UBERON:0001134,1.01e-15,62;UBERON:0002036,1.01e-15,62;UBERON:0003082,1.01e-15,62;UBERON:0003104,1.02e-14,160;UBERON:0009142,1.02e-14,160;UBERON:0002385,2.19e-14,64;UBERON:0001015,2.19e-14,64;UBERON:0000383,2.19e-14,64;UBERON:0005256,7.11e-14,122;UBERON:0002100,1.01e-11,199;UBERON:0000490,9.07e-10,148;UBERON:0001637,2.91e-08,42;UBERON:0003509,2.91e-08,42;UBERON:0004572,2.91e-08,42;UBERON:0004573,2.78e-07,33;UBERON:0004571,2.78e-07,33 | |||
|phase1_expression=85.0254814986205,58.4494430222384,79.0754206978398,92.06743448488,87.1574134133211,112.531669608948,157.045924464353,61.2768277224026,83.8405866521482,120.655362822241,287.49408120464,115.555485856861,134.78492587474,142.950137668854,146.146242696011,161.358035148426,146.454770309826,178.925972144906,165.409218789982,126.322205586784,150.348509447014,130.397164134885,105.334843264229,79.2502921171999,80.849459899053,41.1868256981457,37.5199693786252,39.748944563408,54.2842702051488,46.0595277716655,34.678811622801,127.799550202571,125.904074049309,68.7742458910225,30.2896754268979,36.2531542842925,68.1153019256846,36.009701554572,18.2495447197829,34.9387501852521,64.4876565810982,56.3574978873024,54.0908692031792,24.4269041149669,26.4513160582167,25.4713264247207,25.799623096531,29.6040879375715,26.6347478969789,34.2353946863359,31.2516061965503,42.5668013799453,39.9904989654477,41.3110197493649,23.0225027210381,32.9424094199558,26.1989904055532,33.7085226667627,42.8517449319264,37.869625194979,31.9668562899521,31.335873517738,32.3131125347044,28.1308335351578,34.2446901581729,28.369261234557,26.1585344578141,35.4260618012008,32.8534238604727,38.8768032022159,32.0861736395685,39.773984686657,41.4565727547559,42.2510572623884,38.4813782936729,43.3993396202338,59.1971886142029,50.6096128875876,27.4840753252007,36.4816311988798,27.8483348078726,25.2076532195195,72.1584602291423,51.3370294586404,56.039082993404,47.7937849274488,42.8423706128533,46.5549476363131,54.8667244411436,46.7486339722328,30.7375003319102,25.8384363323213,33.2577708468949,80.6245104332058,39.2355994087075,51.35989653114,12.982844827513,17.6854843237124,20.9713528979499,38.2857074444653,65.8362978599853,68.6499318315363,42.8618802497405,46.0125186935767,46.2531274735494,50.0666601758984,39.2665602459273,34.8408389653836,38.8877449204036,61.3353384171712,98.6569563495479,53.6135708609847,26.2467216796847,27.5567052932404,25.0885257131944,37.7320111182895,32.1905214625614,33.6754896572977,21.5066738216577,32.4936722610579,38.4139237775287,42.7703420001768,29.0609979820101,26.621215120119,38.7285252312272,31.0178200177662,31.2028638829998,22.9831687276195,14.4417705723094,22.8822558134822,58.5136479153508,116.031248728729,63.164105550704,74.0950262388361,107.787650786716,107.620963587892,37.3784395114017,80.2947535999349,87.728310328255,86.2527356129374,79.2269766951997,26.0648360240448,151.91113521799,93.8084640244606,41.8666137814541,36.0448556209483,36.4304811821691,13.8324562097098,17.731842234184,14.486842551853,30.4106483271059,71.3994713938083,34.7140501607594,52.5736385989329,48.2424351641392,50.0714836330923,44.9339178054143,64.6041897923322,65.8167585970414,44.1831208849365,43.908395564897,41.8149658145182,46.8599150492485,26.4717417849025,48.6085168729056,24.7360247346901,26.0454072246357,19.8196205650647,82.790984231577,56.9559395740877,31.5106999560301,11.8602375692457,7.75560528296651,105.098666566351,69.0791012856493,84.7158123036039,72.4278219048307,53.925284700777,71.9976815862665,111.574842428319,89.6691564129522,170.693943504675,55.0843532657586,43.6462577505789,47.2404899997896,97.020111120401,85.2740368230398,59.9862865494519,122.054590040655,94.1278505548341,94.3021174281865,62.3577187798392,61.0261000267856,67.6972888304838,97.9940022023488,115.587092590374,57.6557858960771,148.500357160257,142.920285123006,103.758395260935,237.143986799359,99.4866433468531,49.4218153494258,53.1963101729631,126.864532434562,161.212580590284,126.350207540448,72.3697328560934,45.2061881935932,105.924464854009,95.7932193241219,111.633887743398,100.373163478239,61.3184485308597,123.581592604176,61.9409139325447,91.7856588618491,59.3219369473669,111.196277559898,91.976606329904,91.2374652767699,100.147585638274,146.669912348572,97.4034699943016,67.0955456653453,89.4830337613692,61.1088267709273,72.6263130401739,74.4803173793613,90.7034231384491,81.7519556837036,102.193660541232,228.416317201531,182.680426446779,226.541271018068,89.15864218214,176.138593527379,176.868666059567,156.952346462713,144.365606900206,176.91153226276,170.599604724354,164.903080282212,210.606503346177,195.240357799719,191.604084159302,62.7432136430951,126.217596423101,145.285625999984,172.000192321084,44.3642621876408,59.9524602173352,33.0842347741586,24.2804704678058,39.2333118952532,85.6123373389643,123.908072226338,98.9135428667052,59.1110357780389,52.4050599597278,101.000574646201,146.630804724421,85.1554917949112,98.6567746337904,67.0403644086542,38.4014751044456,45.3725802325079,36.7190513812775,103.516776132665,103.87682561348,56.6299114001014,56.8630364288348,41.6167254408439,159.347517777521,98.2695449963328,83.2219820812809,42.5402982838529,49.9890374244015,137.250999141146,37.4424060800917,73.7845877030834,63.649731471017,75.3747356370708,67.2872170162605,83.4362330999101,133.313960519839,256.706209390003,172.783170482932,85.0383364656485,152.273930326866,100.039251420702,64.363242414237,64.9580502561587,64.4643532366151,117.766533055336,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| |||
|short_description=p1@CUTA | |||
}} | |||
Revision as of 11:25, 22 January 2014
| Short description: | p1@CUTA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CUTA_5end |
| Coexpression cluster: | C887_Mesenchymal_Alveolar_Smooth_Renal_Fibroblast_leiomyoma_Preadipocyte |
| Association with transcript: | 0bp_to_ENST00000465956_5end |
| EntrezGene: | CUTA |
| HGNC: | 21101 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| smooth muscle cell | 1.20e-19 | 43 |
| smooth muscle myoblast | 1.20e-19 | 43 |
| embryonic cell | 1.13e-18 | 250 |
| muscle precursor cell | 2.36e-18 | 58 |
| myoblast | 2.36e-18 | 58 |
| multi-potent skeletal muscle stem cell | 2.36e-18 | 58 |
| electrically responsive cell | 4.89e-18 | 61 |
| electrically active cell | 4.89e-18 | 61 |
| muscle cell | 7.77e-18 | 55 |
| vascular associated smooth muscle cell | 2.03e-15 | 32 |
| mesodermal cell | 1.37e-13 | 121 |
| fibroblast | 6.20e-10 | 76 |
| stem cell | 2.66e-08 | 441 |
| ectodermal cell | 3.65e-08 | 72 |
| somatic stem cell | 4.75e-08 | 433 |
| multi fate stem cell | 8.07e-08 | 427 |
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 7.79e-19 | 78 |
| multilaminar epithelium | 9.02e-19 | 83 |
| somite | 1.58e-17 | 71 |
| presomitic mesoderm | 1.58e-17 | 71 |
| presumptive segmental plate | 1.58e-17 | 71 |
| dermomyotome | 1.58e-17 | 71 |
| trunk paraxial mesoderm | 1.58e-17 | 71 |
| dense mesenchyme tissue | 5.36e-17 | 73 |
| paraxial mesoderm | 1.21e-16 | 72 |
| presumptive paraxial mesoderm | 1.21e-16 | 72 |
| skeletal muscle tissue | 1.01e-15 | 62 |
| striated muscle tissue | 1.01e-15 | 62 |
| myotome | 1.01e-15 | 62 |
| mesenchyme | 1.02e-14 | 160 |
| entire embryonic mesenchyme | 1.02e-14 | 160 |
| muscle tissue | 2.19e-14 | 64 |
| musculature | 2.19e-14 | 64 |
| musculature of body | 2.19e-14 | 64 |
| trunk mesenchyme | 7.11e-14 | 122 |
| trunk | 1.01e-11 | 199 |
| unilaminar epithelium | 9.07e-10 | 148 |
| artery | 2.91e-08 | 42 |
| arterial blood vessel | 2.91e-08 | 42 |
| arterial system | 2.91e-08 | 42 |
| systemic artery | 2.78e-07 | 33 |
| systemic arterial system | 2.78e-07 | 33 |
