FFCP PHASE1:Hg19::chr6:32784862..32784871,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4937 | |||
|TSSclassifier=strong | |||
|UniProt=P13765,Q5QNS2 | |||
|association_with_transcript=-37bp_to_ENST00000438763,NM_002120,uc003oca.2,uc011dqg.1_5end | |||
|description=CAGE_peak_3_at_HLA-DOB_5end | |||
|id=chr6:32784862..32784871,- | |||
|ontology_enrichment_celltype=CL:0000945!5.22e-43!24;CL:0000826!5.22e-43!24;CL:0000236!9.11e-22!14;CL:0000542!1.03e-21!53;CL:0000051!1.03e-21!53;CL:0000453!4.09e-20!5;CL:0000838!8.07e-20!52;CL:0000451!1.14e-12!10;CL:0000738!4.39e-11!140;CL:0000990!5.04e-11!8;CL:0001014!3.38e-09!2;CL:0001016!3.38e-09!2;CL:0000785!8.98e-09!2;CL:0000955!8.98e-09!2;CL:0000818!8.98e-09!2;CL:0000954!8.98e-09!2;CL:0000816!8.98e-09!2;CL:0000037!5.89e-08!172;CL:0000566!5.89e-08!172;CL:0002032!1.23e-07!165;CL:0000837!1.23e-07!165;CL:0002031!1.29e-07!124;CL:0000988!3.25e-07!182;CL:0002087!4.47e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0001014;7.14e-26;2!CL:0001016;7.14e-26;2!CL:0000945;2.00e-19;24!CL:0000236;3.07e-16;13!CL:0000542;1.52e-11;53!CL:0000453;3.26e-11;5!CL:0000840;1.44e-09;5!CL:0000990;8.37e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.14e-26,2;CL:0001016,7.14e-26,2;CL:0000945,2.00e-19,24;CL:0000826,2.00e-19,24;CL:0000236,3.66e-15,14;CL:0000453,3.26e-11,5;CL:0000840,1.44e-09,5;CL:0001029,1.44e-09,5;CL:0000838,1.78e-09,52;CL:0000542,2.59e-09,53;CL:0000051,2.59e-09,53;CL:0002031,2.26e-07,120;CL:0000990,8.37e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;1.52e-11;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.00e-18!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.00e-13!7;UBERON:0002106!3.37e-12!3;UBERON:0004854!3.37e-12!3;UBERON:0009034!3.37e-12!3;UBERON:0002095!3.37e-12!3;UBERON:0004782!3.37e-12!3;UBERON:0003281!3.37e-12!3;UBERON:0009664!3.37e-12!3;UBERON:0002296!3.37e-12!3;UBERON:0005602!3.37e-12!3;UBERON:0001179!3.37e-12!3;UBERON:0006293!3.37e-12!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,2.01414721508784,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0.426730222566507,0.800791974072025,0,0,0.954053754535364,1.1384259382189,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.664324201566815,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0.203909198930495,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0.699588091474503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.336760265072938,0.215166616178029,0,0,0,0,0,0,0,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p3@HLA-DOB | |||
}} |
Revision as of 11:17, 22 January 2014
Short description: | p3@HLA-DOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HLA-DOB_5end |
Coexpression cluster: | NA |
Association with transcript: | -37bp_to_ENST00000438763, NM_002120, uc003oca.2, uc011dqg.1_5end |
EntrezGene: | HLA-DOB |
HGNC: | 4937 |
UniProt: | P13765Q5QNS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.14e-26 | 2 |
immature CD1a-positive Langerhans cell | 7.14e-26 | 2 |
lymphocyte of B lineage | 2.00e-19 | 24 |
pro-B cell | 2.00e-19 | 24 |
B cell | 3.66e-15 | 14 |
Langerhans cell | 3.26e-11 | 5 |
immature conventional dendritic cell | 1.44e-09 | 5 |
common dendritic progenitor | 1.44e-09 | 5 |
lymphoid lineage restricted progenitor cell | 1.78e-09 | 52 |
lymphocyte | 2.59e-09 | 53 |
common lymphoid progenitor | 2.59e-09 | 53 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
conventional dendritic cell | 8.37e-07 | 8 |