FFCP PHASE1:Hg19::chr6:32784847..32784854,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4937 | |||
|TSSclassifier=strong | |||
|UniProt=P13765,Q5QNS2 | |||
|association_with_transcript=-22bp_to_ENST00000438763,NM_002120,uc003oca.2,uc011dqg.1_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_HLA-DOB_5end | |||
|id=chr6:32784847..32784854,- | |||
|ontology_enrichment_celltype=CL:0000945!2.01e-63!24;CL:0000826!2.01e-63!24;CL:0000236!6.04e-37!14;CL:0000542!3.31e-30!53;CL:0000051!3.31e-30!53;CL:0000838!2.74e-28!52;CL:0000738!9.93e-11!140;CL:0002087!1.32e-09!119;CL:0002166!1.43e-09!3;CL:0002031!5.38e-09!124;CL:0002032!4.74e-08!165;CL:0000837!4.74e-08!165;CL:0000037!1.89e-07!172;CL:0000566!1.89e-07!172;CL:0000785!2.50e-07!2;CL:0000955!2.50e-07!2;CL:0000818!2.50e-07!2;CL:0000954!2.50e-07!2;CL:0000816!2.50e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.94e-136;13!CL:0000945;1.78e-89;24!CL:0000542;2.41e-34;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.66e-127,14;CL:0000945,1.78e-89,24;CL:0000826,1.78e-89,24;CL:0000838,3.95e-41,52;CL:0000542,2.40e-40,53;CL:0000051,2.40e-40,53;CL:0002087,3.68e-18,115;CL:0002031,2.20e-17,120;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.41e-34;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.15e-14!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.23e-10!7;UBERON:0002106!3.33e-09!3;UBERON:0004854!3.33e-09!3;UBERON:0009034!3.33e-09!3;UBERON:0002095!3.33e-09!3;UBERON:0004782!3.33e-09!3;UBERON:0003281!3.33e-09!3;UBERON:0009664!3.33e-09!3;UBERON:0002296!3.33e-09!3;UBERON:0005602!3.33e-09!3;UBERON:0001179!3.33e-09!3;UBERON:0006293!3.33e-09!3;UBERON:0001708!2.87e-07!4;UBERON:0001704!2.87e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,2.47895041856965,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,3.27683166757279,1.77901850772711,1.70692089026603,2.80277190925209,1.14950487990897,1.32208974556972,2.86216126360609,1.1384259382189,1.76171156811282,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.547364367646998,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,0.496166021811951,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0.163565394255844,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0,0.921871900446234,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.186224142887574,0,0,0,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p2@HLA-DOB | |||
}} |
Revision as of 11:17, 22 January 2014
Short description: | p2@HLA-DOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HLA-DOB_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -22bp_to_ENST00000438763, NM_002120, uc003oca.2, uc011dqg.1_5end |
EntrezGene: | HLA-DOB |
HGNC: | 4937 |
UniProt: | P13765Q5QNS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.66e-127 | 14 |
lymphocyte of B lineage | 1.78e-89 | 24 |
pro-B cell | 1.78e-89 | 24 |
lymphoid lineage restricted progenitor cell | 3.95e-41 | 52 |
lymphocyte | 2.40e-40 | 53 |
common lymphoid progenitor | 2.40e-40 | 53 |
nongranular leukocyte | 3.68e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.20e-17 | 120 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |