FFCP PHASE1:Mm9::chr1:34899902..34899910,-: Difference between revisions
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{{FFCP|EntrezGene=214469|HGNC=|MCL_coexpression_id=2|UniProt=Q80XQ8|association_with_transcript=0bp_to_ENSMUST00000047534,ENSMUST00000140534_5end|description=CAGE_peak_4_at_Fam168b_5end|id=chr1:34899902..34899910,-|ontology_enrichment_celltype=CL:0000117!1.06e-10!23;CL:0000337!1.06e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-11,23;CL:0000337,1.39e-11,23;CL:0000540,5.64e-07,33;CL:0000047,5.64e-07,33;CL:0000031,5.64e-07,33;CL:0000404,5.64e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.06e-17!102;UBERON:0000924!2.06e-17!102;UBERON:0006601!2.06e-17!102;UBERON:0001017!1.25e-16!73;UBERON:0005743!1.25e-16!73;UBERON:0001049!1.55e-16!52;UBERON:0005068!1.55e-16!52;UBERON:0006241!1.55e-16!52;UBERON:0007135!1.55e-16!52;UBERON:0002020!2.54e-16!34;UBERON:0000955!7.31e-16!50;UBERON:0006238!7.31e-16!50;UBERON:0000073!1.60e-15!75;UBERON:0001016!1.60e-15!75;UBERON:0002346!1.69e-15!71;UBERON:0003075!1.69e-15!71;UBERON:0007284!1.69e-15!71;UBERON:0002616!2.92e-15!49;UBERON:0000033!7.20e-15!63;UBERON:0002791!7.20e-14!29;UBERON:0003528!7.20e-14!29;UBERON:0001893!7.20e-14!29;UBERON:0003080!7.14e-13!40;UBERON:0003056!1.14e-12!49;UBERON:0002780!2.24e-12!39;UBERON:0001890!2.24e-12!39;UBERON:0006240!2.24e-12!39;UBERON:0000956!6.56e-10!21;UBERON:0001869!6.56e-10!21;UBERON:0000203!6.56e-10!21;UBERON:0007811!1.39e-09!86;UBERON:0000153!4.29e-09!94;UBERON:0002619!4.88e-08!17;UBERON:0002021!4.98e-08!10;UBERON:0000411!4.98e-08!10;UBERON:0001950!4.98e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.78e-20,54;UBERON:0004121,1.29e-19,95;UBERON:0000924,1.29e-19,95;UBERON:0006601,1.29e-19,95;UBERON:0001017,5.29e-19,73;UBERON:0001049,7.09e-19,52;UBERON:0005068,7.09e-19,52;UBERON:0006241,7.09e-19,52;UBERON:0007135,7.09e-19,52;UBERON:0010371,1.99e-18,73;UBERON:0002020,2.37e-18,34;UBERON:0001016,9.04e-18,75;UBERON:0002346,2.13e-17,64;UBERON:0003075,2.13e-17,64;UBERON:0007284,2.13e-17,64;UBERON:0000955,4.68e-16,47;UBERON:0006238,4.68e-16,47;UBERON:0003528,1.60e-15,29;UBERON:0002791,1.60e-15,29;UBERON:0001893,1.60e-15,29;UBERON:0002616,2.21e-15,46;UBERON:0003080,1.52e-14,40;UBERON:0002780,5.68e-14,39;UBERON:0001890,5.68e-14,39;UBERON:0006240,5.68e-14,39;UBERON:0003056,7.61e-14,49;UBERON:0000956,5.78e-11,21;UBERON:0001869,5.78e-11,21;UBERON:0000203,5.78e-11,21;UBERON:0002021,5.01e-09,10;UBERON:0000411,5.01e-09,10;UBERON:0001950,5.01e-09,10;UBERON:0002619,8.19e-09,17;UBERON:0010314,2.88e-08,92|phase1_expression=0.480446541314382,0.697950815278722,1.81999695755814,0.60492842261366,0,0.33575854382378,0.233612640595526,0.645616617207881,0.703943610758334,0.468129052643987,0.513653904676515,1.43589886191606,1.02720437958723,0.524522414513984,0,0,0,0.315462165358238,0.822686601634433,0.42438965179803,3.06155844543851,0.695036658406197,0.783599367416806,0.319984845586813,0.22940928106717,1.14846392823004,0.86152399231815,0.861884930743556,0.570070258369122,0.756090389279792,0.443461021310609,0,0,0,0.866554859253824,0.166234645358492,0.408338712524738,0.418531630736908,0,0.523523743973798,0.588231488031014,1.36609096991689,1.94204141212461,1.1330713617802,0.912392380975631,0.734187008646726,0.782391344348039,0.218025156380447,1.5378032791413,0.388859798148567,0.419959264876088,1.43752564364972,1.67782606057736,1.45072428402269,0.672187598284928,1.02903774414379,0.573066879877513,0.515672092277442,4.45096213891115,1.5869729378161,2.53532561402472,0.677689064138264,0.889294796111139,1.3498495759221,0.988866362566974,0.7104801149461,1.79760066311043,2.30530983192933,2.69592992002042,2.56511282830212,1.89292465216244,1.71390590642282,3.75476519617743,1.83736198822431,1.82106394934649,0.919218786610021,8.8092704799511,5.2351808614927,4.45458946443106,4.2203612073662,2.92760459527711,3.12548022334056,4.18774498502071,1.68828783009504,5.19514042441154,5.00868595305235,4.55589378557129,2.98239113320481,0.37863096666592,0.755715601067855,0.289864488701678,1.72084775396277,0.679971333707751,0.539703191637817,0,0.896053774194671,1.26399978118577,1.53387290320252,1.03914401841148,0,1.40843419776681,0,5.09610479413291,0,0.216491041011214,0,0.505524445014783,1.02765491747154,1.29468941823586,0.890652834388949,0.693941307064543,1.21786191324856,1.38369298353635,1.50722640552623,0.940709657085638,1.75933227861546,1.23597483867187,0.86759614151947,1.76922110389975,0.970601099684455,0.883366073841574,0.969750506270444,1.86391761218122,2.63502717310392,4.81727425670947,2.55457055208591,0.838705871541442,0,0.508280908292259,3.59497534571574,8.23501085073528,3.01570445070875,14.7750672163435,13.5529192385075,4.1557608911912,7.30085683804909,1.2220723662038,1.11966273549084,4.54900965180614,1.26265113531884,1.56144531555244,0.689706313300419,1.26043490863744,1.35634336052144,1.15662048557257,0.896796041993948,1.3118241438362,2.06962696591213,0.431135985865684,1.32374256117473,0.879755620819744,1.31517439456545,0.834141747676794,0.696504333044333,1.4404749548556,0.796137067273973,0,0,0.56832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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:214469 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80XQ8 | |||
|association_with_transcript=0bp_to_ENSMUST00000047534,ENSMUST00000140534_5end | |||
|cluster_id=chr1:34899902..34899910,- | |||
|description=CAGE_peak_4_at_Fam168b_5end | |||
|id=chr1:34899902..34899910,- | |||
|ontology_enrichment_celltype=CL:0000117!1.06e-10!23;CL:0000337!1.06e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-11,23;CL:0000337,1.39e-11,23;CL:0000540,5.64e-07,33;CL:0000047,5.64e-07,33;CL:0000031,5.64e-07,33;CL:0000404,5.64e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.06e-17!102;UBERON:0000924!2.06e-17!102;UBERON:0006601!2.06e-17!102;UBERON:0001017!1.25e-16!73;UBERON:0005743!1.25e-16!73;UBERON:0001049!1.55e-16!52;UBERON:0005068!1.55e-16!52;UBERON:0006241!1.55e-16!52;UBERON:0007135!1.55e-16!52;UBERON:0002020!2.54e-16!34;UBERON:0000955!7.31e-16!50;UBERON:0006238!7.31e-16!50;UBERON:0000073!1.60e-15!75;UBERON:0001016!1.60e-15!75;UBERON:0002346!1.69e-15!71;UBERON:0003075!1.69e-15!71;UBERON:0007284!1.69e-15!71;UBERON:0002616!2.92e-15!49;UBERON:0000033!7.20e-15!63;UBERON:0002791!7.20e-14!29;UBERON:0003528!7.20e-14!29;UBERON:0001893!7.20e-14!29;UBERON:0003080!7.14e-13!40;UBERON:0003056!1.14e-12!49;UBERON:0002780!2.24e-12!39;UBERON:0001890!2.24e-12!39;UBERON:0006240!2.24e-12!39;UBERON:0000956!6.56e-10!21;UBERON:0001869!6.56e-10!21;UBERON:0000203!6.56e-10!21;UBERON:0007811!1.39e-09!86;UBERON:0000153!4.29e-09!94;UBERON:0002619!4.88e-08!17;UBERON:0002021!4.98e-08!10;UBERON:0000411!4.98e-08!10;UBERON:0001950!4.98e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.78e-20,54;UBERON:0004121,1.29e-19,95;UBERON:0000924,1.29e-19,95;UBERON:0006601,1.29e-19,95;UBERON:0001017,5.29e-19,73;UBERON:0001049,7.09e-19,52;UBERON:0005068,7.09e-19,52;UBERON:0006241,7.09e-19,52;UBERON:0007135,7.09e-19,52;UBERON:0010371,1.99e-18,73;UBERON:0002020,2.37e-18,34;UBERON:0001016,9.04e-18,75;UBERON:0002346,2.13e-17,64;UBERON:0003075,2.13e-17,64;UBERON:0007284,2.13e-17,64;UBERON:0000955,4.68e-16,47;UBERON:0006238,4.68e-16,47;UBERON:0003528,1.60e-15,29;UBERON:0002791,1.60e-15,29;UBERON:0001893,1.60e-15,29;UBERON:0002616,2.21e-15,46;UBERON:0003080,1.52e-14,40;UBERON:0002780,5.68e-14,39;UBERON:0001890,5.68e-14,39;UBERON:0006240,5.68e-14,39;UBERON:0003056,7.61e-14,49;UBERON:0000956,5.78e-11,21;UBERON:0001869,5.78e-11,21;UBERON:0000203,5.78e-11,21;UBERON:0002021,5.01e-09,10;UBERON:0000411,5.01e-09,10;UBERON:0001950,5.01e-09,10;UBERON:0002619,8.19e-09,17;UBERON:0010314,2.88e-08,92 | |||
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| |||
|short_description=p4@Fam168b | |||
}} |
Revision as of 14:25, 5 August 2015
Short description: | p4@Fam168b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Fam168b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000047534, ENSMUST00000140534_5end |
EntrezGene: | 214469 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.39e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-11 | 23 |
neuron | 5.64e-07 | 33 |
neuronal stem cell | 5.64e-07 | 33 |
neuroblast | 5.64e-07 | 33 |
electrically signaling cell | 5.64e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.78e-20 | 54 |
ectoderm-derived structure | 1.29e-19 | 95 |
ectoderm | 1.29e-19 | 95 |
presumptive ectoderm | 1.29e-19 | 95 |
central nervous system | 5.29e-19 | 73 |
neural tube | 7.09e-19 | 52 |
neural rod | 7.09e-19 | 52 |
future spinal cord | 7.09e-19 | 52 |
neural keel | 7.09e-19 | 52 |
ecto-epithelium | 1.99e-18 | 73 |
gray matter | 2.37e-18 | 34 |
nervous system | 9.04e-18 | 75 |
neurectoderm | 2.13e-17 | 64 |
neural plate | 2.13e-17 | 64 |
presumptive neural plate | 2.13e-17 | 64 |
brain | 4.68e-16 | 47 |
future brain | 4.68e-16 | 47 |
brain grey matter | 1.60e-15 | 29 |
regional part of telencephalon | 1.60e-15 | 29 |
telencephalon | 1.60e-15 | 29 |
regional part of brain | 2.21e-15 | 46 |
anterior neural tube | 1.52e-14 | 40 |
regional part of forebrain | 5.68e-14 | 39 |
forebrain | 5.68e-14 | 39 |
future forebrain | 5.68e-14 | 39 |
pre-chordal neural plate | 7.61e-14 | 49 |
cerebral cortex | 5.78e-11 | 21 |
cerebral hemisphere | 5.78e-11 | 21 |
pallium | 5.78e-11 | 21 |
occipital lobe | 5.01e-09 | 10 |
visual cortex | 5.01e-09 | 10 |
neocortex | 5.01e-09 | 10 |
regional part of cerebral cortex | 8.19e-09 | 17 |
structure with developmental contribution from neural crest | 2.88e-08 | 92 |