FFCP PHASE1:Hg19::chr6:31541218..31541237,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1110 | |||
|description=CAGE_peak_at_chr6:31541218..31541237,+ | |||
|id=chr6:31541218..31541237,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.72e-18!52;CL:0000542!4.22e-18!53;CL:0000051!4.22e-18!53;CL:0000945!2.13e-14!24;CL:0000826!2.13e-14!24;CL:0000080!2.58e-12!6;CL:0002087!8.27e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!3.31e-09!1;DOID:0060061!3.31e-09!1;DOID:8691!3.31e-09!1;DOID:630!5.28e-09!1;DOID:0050177!5.28e-09!1;DOID:0050427!5.28e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.58e-34;1!DOID:0060061;2.58e-34;1!DOID:8691;2.58e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.58e-34,1;DOID:0060061,2.58e-34,1;DOID:8691,2.58e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002331!1.43e-07!10;UBERON:0000358!1.43e-07!10;UBERON:0000307!1.43e-07!10;UBERON:0000091!1.43e-07!10;UBERON:0000087!1.43e-07!10;UBERON:0007806!1.43e-07!10;UBERON:0008780!1.43e-07!10;UBERON:0005728!1.43e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.27e-30;10!UBERON:0000178;1.47e-20;15!UBERON:0000179;1.47e-20;15!UBERON:0000463;1.47e-20;15!UBERON:0000478;3.63e-13;24!UBERON:0002390;3.72e-10;32!UBERON:0000922;9.86e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.06e-30,10;UBERON:0000358,2.06e-30,10;UBERON:0000307,2.06e-30,10;UBERON:0000091,2.06e-30,10;UBERON:0000087,2.06e-30,10;UBERON:0007010,2.06e-30,10;UBERON:0007806,2.06e-30,10;UBERON:0008780,2.06e-30,10;UBERON:0005728,2.06e-30,10;UBERON:0000178,1.37e-20,15;UBERON:0000179,1.37e-20,15;UBERON:0000463,1.37e-20,15;UBERON:0000478,3.48e-13,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.493313713811028,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77912677208373,11.7385741999178,3.13265848516366,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.99943281347185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr6:31541218..31541237,+ | |||
}} |
Revision as of 11:00, 22 January 2014
Short description: | p@chr6:31541218..31541237, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31541218..31541237, + |
Coexpression cluster: | C1110_cord_mycosis_colon_embryonic_argyrophil_xeroderma_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.06e-30 | 10 |
blastocyst | 2.06e-30 | 10 |
blastula | 2.06e-30 | 10 |
bilaminar disc | 2.06e-30 | 10 |
inner cell mass | 2.06e-30 | 10 |
cleaving embryo | 2.06e-30 | 10 |
connecting stalk | 2.06e-30 | 10 |
inner cell mass derived epiblast | 2.06e-30 | 10 |
extraembryonic mesoderm | 2.06e-30 | 10 |
blood | 1.37e-20 | 15 |
haemolymphatic fluid | 1.37e-20 | 15 |
organism substance | 1.37e-20 | 15 |
extraembryonic structure | 3.48e-13 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.58e-34 | 1 |
cutaneous T cell lymphoma | 2.58e-34 | 1 |
mycosis fungoides | 2.58e-34 | 1 |