FFCP PHASE1:Mm9::chr1:188529927..188529939,-: Difference between revisions
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{{FFCP|EntrezGene=21808|HGNC=|UniProt=P27090,Q3TWH5,Q8CDZ9|association_with_transcript=-56bp_to_ENSMUST00000045288,NM_009367,uc007dzo.2,uc007dzp.2_5end|description=CAGE_peak_13_at_Tgfb2_5end|id=chr1:188529927..188529939,-|ontology_enrichment_celltype=CL:0000107!3.66e-09!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.86e-22,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!3.66e-09!9;UBERON:0000010!6.65e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.86e-22,9;UBERON:0000010,1.73e-18,11;UBERON:0010313,1.31e-17,3;UBERON:0002342,1.31e-17,3;UBERON:0002005,1.31e-17,3;UBERON:0005428,1.31e-17,3;UBERON:0005062,1.31e-17,3;UBERON:0006834,3.62e-14,1|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.65407546914134,0,0.777719596297134,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0,0,0,0.520455980298408,0,0,0,0,0,0.247194967734374,0,0,0.808834249737046,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0.520481771850815,0.689706313300419,0.900310649026746,0.30140963567143,0.680364991513279,0.2562274405697,0.281105173679186,0,0.215567992932842,0.567318240503458,0.703804496655795,0.657587197282725,0.278047249225598,0,0.411564272815887,0,0,0,0,0.621377317606506,0.469052119962192,0,0.946978942340841,0.393528463494808,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.651859905768103,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0.630540576424764,0.664394068946325,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,1.26203287766503,0.390438744296638,2.15423397732799,0.477937595905104,1.33679204449436,0.849229592366497,0.404810701674894,0.876767573733936,1.18586333383957,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0.469343416127421,0,0,0.32977250588296,0,0.180938774784468,0.238744688006273,0,0.291480836629851,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81815673898664,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,0.170733605754134,0.729320151204882,0,0,0,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.347652977834566,0,0,0.294397840268795,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p13@Tgfb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21808 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P27090,uniprot:Q3TWH5,uniprot:Q8CDZ9 | |||
|association_with_transcript=-56bp_to_ENSMUST00000045288,NM_009367,uc007dzo.2,uc007dzp.2_5end | |||
|cluster_id=chr1:188529927..188529939,- | |||
|description=CAGE_peak_13_at_Tgfb2_5end | |||
|id=chr1:188529927..188529939,- | |||
|ontology_enrichment_celltype=CL:0000107!3.66e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.86e-22,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!3.66e-09!9;UBERON:0000010!6.65e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.86e-22,9;UBERON:0000010,1.73e-18,11;UBERON:0010313,1.31e-17,3;UBERON:0002342,1.31e-17,3;UBERON:0002005,1.31e-17,3;UBERON:0005428,1.31e-17,3;UBERON:0005062,1.31e-17,3;UBERON:0006834,3.62e-14,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.65407546914134,0,0.777719596297134,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0,0,0,0.520455980298408,0,0,0,0,0,0.247194967734374,0,0,0.808834249737046,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0.520481771850815,0.689706313300419,0.900310649026746,0.30140963567143,0.680364991513279,0.2562274405697,0.281105173679186,0,0.215567992932842,0.567318240503458,0.703804496655795,0.657587197282725,0.278047249225598,0,0.411564272815887,0,0,0,0,0.621377317606506,0.469052119962192,0,0.946978942340841,0.393528463494808,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.651859905768103,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0.630540576424764,0.664394068946325,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,1.26203287766503,0.390438744296638,2.15423397732799,0.477937595905104,1.33679204449436,0.849229592366497,0.404810701674894,0.876767573733936,1.18586333383957,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0.469343416127421,0,0,0.32977250588296,0,0.180938774784468,0.238744688006273,0,0.291480836629851,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81815673898664,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,0.170733605754134,0.729320151204882,0,0,0,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.347652977834566,0,0,0.294397840268795,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p13@Tgfb2 | |||
}} |
Revision as of 11:14, 5 August 2015
Short description: | p13@Tgfb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Tgfb2_5end |
Coexpression cluster: | NA |
Association with transcript: | -56bp_to_ENSMUST00000045288, NM_009367, uc007dzo.2, uc007dzp.2_5end |
EntrezGene: | 21808 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.86e-22 | 9 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.86e-22 | 9 |
peripheral nervous system | 1.73e-18 | 11 |
neural crest-derived structure | 1.31e-17 | 3 |
neural crest | 1.31e-17 | 3 |
enteric nervous system | 1.31e-17 | 3 |
vagal neural crest | 1.31e-17 | 3 |
neural fold | 1.31e-17 | 3 |
uterus or analog | 3.62e-14 | 1 |