FFCP PHASE1:Mm9::chr1:188529773..188529798,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=106|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:188529773..188529798,+|id=chr1:188529773..188529798,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000710,2.90e-11,1;CL:0002077,2.90e-11,1;CL:0005014,2.90e-11,1;CL:0002315,2.90e-11,1;CL:0002490,2.90e-11,1;CL:0000213,3.65e-11,1;CL:0002078,3.65e-11,1;CL:0000115,3.65e-11,1;CL:0002262,3.65e-11,1;CL:1000398,3.65e-11,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.83e-11,1;UBERON:0001044,2.31e-11,1;UBERON:0001736,2.31e-11,1;UBERON:0003293,2.31e-11,1;UBERON:0003294,2.31e-11,1;UBERON:0001829,2.31e-11,1;UBERON:0010047,2.31e-11,1;UBERON:0000167,2.31e-11,1;UBERON:0006298,2.31e-11,1;UBERON:0002394,3.65e-11,1;UBERON:0001281,3.65e-11,1;UBERON:0000353,3.65e-11,1;UBERON:0003497,3.65e-11,1;UBERON:0003909,3.65e-11,1;UBERON:0003928,3.65e-11,1;UBERON:0003835,3.65e-11,1;UBERON:0003513,3.65e-11,1;UBERON:0001280,3.65e-11,1;UBERON:0004647,3.65e-11,1;UBERON:0002294,3.65e-11,1;UBERON:0001173,3.65e-11,1;UBERON:0004912,3.65e-11,1;UBERON:0005171,3.65e-11,1;UBERON:0005795,9.05e-11,4;UBERON:0000995,9.05e-11,4;UBERON:0003975,8.42e-09,5|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0.259786004602869,0,2.11265129665021,1.28326477414318,0,0,0,0,0,0,0,0,0,0.608930956624282,0.230615497256059,0,0,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0.650602214813519,0.459804208866946,0.540186389416048,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,0,0,0.756424320671277,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0.414251545071004,1.17263029990548,0.36012412292203,0.473489471170421,0,0,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,1.13694847062291,0.488894929326078,0.509235257325564,0.704070744865506,0.502518772325447,0.238043640886014,0,0.315270288212382,0.8858587585951,0.797273843287435,0,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0,0.141940085208269,0.178065603667255,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,1.0591603543191,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0.129614973291793,2.4853572523477,0,0.299033092087958,0.165458490457098,0.583353565032143,0.774958940866387,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0.386379188064381,29.4661486458356,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0,0.628839487883947,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,1.02860775715625,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.355905054372522,0.394017929502254,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p@chr1:188529773..188529798,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=106 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:188529773..188529798,+ | |||
|description=CAGE_peak_at_chr1:188529773..188529798,+ | |||
|id=chr1:188529773..188529798,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000710,2.90e-11,1;CL:0002077,2.90e-11,1;CL:0005014,2.90e-11,1;CL:0002315,2.90e-11,1;CL:0002490,2.90e-11,1;CL:0000213,3.65e-11,1;CL:0002078,3.65e-11,1;CL:0000115,3.65e-11,1;CL:0002262,3.65e-11,1;CL:1000398,3.65e-11,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.83e-11,1;UBERON:0001044,2.31e-11,1;UBERON:0001736,2.31e-11,1;UBERON:0003293,2.31e-11,1;UBERON:0003294,2.31e-11,1;UBERON:0001829,2.31e-11,1;UBERON:0010047,2.31e-11,1;UBERON:0000167,2.31e-11,1;UBERON:0006298,2.31e-11,1;UBERON:0002394,3.65e-11,1;UBERON:0001281,3.65e-11,1;UBERON:0000353,3.65e-11,1;UBERON:0003497,3.65e-11,1;UBERON:0003909,3.65e-11,1;UBERON:0003928,3.65e-11,1;UBERON:0003835,3.65e-11,1;UBERON:0003513,3.65e-11,1;UBERON:0001280,3.65e-11,1;UBERON:0004647,3.65e-11,1;UBERON:0002294,3.65e-11,1;UBERON:0001173,3.65e-11,1;UBERON:0004912,3.65e-11,1;UBERON:0005171,3.65e-11,1;UBERON:0005795,9.05e-11,4;UBERON:0000995,9.05e-11,4;UBERON:0003975,8.42e-09,5 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0.259786004602869,0,2.11265129665021,1.28326477414318,0,0,0,0,0,0,0,0,0,0.608930956624282,0.230615497256059,0,0,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0.650602214813519,0.459804208866946,0.540186389416048,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,0,0,0.756424320671277,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0.414251545071004,1.17263029990548,0.36012412292203,0.473489471170421,0,0,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,1.13694847062291,0.488894929326078,0.509235257325564,0.704070744865506,0.502518772325447,0.238043640886014,0,0.315270288212382,0.8858587585951,0.797273843287435,0,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0,0.141940085208269,0.178065603667255,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,1.0591603543191,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0.129614973291793,2.4853572523477,0,0.299033092087958,0.165458490457098,0.583353565032143,0.774958940866387,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0.386379188064381,29.4661486458356,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0,0.628839487883947,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,1.02860775715625,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.355905054372522,0.394017929502254,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr1:188529773..188529798,+ | |||
}} |
Latest revision as of 11:13, 5 August 2015
Short description: | p@chr1:188529773..188529798, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:188529773..188529798, + |
Coexpression cluster: | MCL_coexpression_mm9:106 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurecto-epithelial cell | 2.90e-11 | 1 |
ecto-epithelial cell | 2.90e-11 | 1 |
auditory epithelial support cell | 2.90e-11 | 1 |
supporting cell of cochlea | 2.90e-11 | 1 |
organ of Corti supporting cell | 2.90e-11 | 1 |
lining cell | 3.65e-11 | 1 |
meso-epithelial cell | 3.65e-11 | 1 |
endothelial cell | 3.65e-11 | 1 |
endothelial cell of sinusoid | 3.65e-11 | 1 |
endothelial cell of hepatic sinusoid | 3.65e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.83e-11 | 1 |
saliva-secreting gland | 2.31e-11 | 1 |
submandibular gland | 2.31e-11 | 1 |
gland of oral region | 2.31e-11 | 1 |
gland of foregut | 2.31e-11 | 1 |
major salivary gland | 2.31e-11 | 1 |
oral gland | 2.31e-11 | 1 |
oral cavity | 2.31e-11 | 1 |
submandibular gland primordium | 2.31e-11 | 1 |
bile duct | 3.65e-11 | 1 |
hepatic sinusoid | 3.65e-11 | 1 |
parenchyma | 3.65e-11 | 1 |
abdomen blood vessel | 3.65e-11 | 1 |
sinusoid | 3.65e-11 | 1 |
digestive system duct | 3.65e-11 | 1 |
abdominal segment blood vessel | 3.65e-11 | 1 |
trunk blood vessel | 3.65e-11 | 1 |
liver parenchyma | 3.65e-11 | 1 |
liver lobule | 3.65e-11 | 1 |
biliary system | 3.65e-11 | 1 |
biliary tree | 3.65e-11 | 1 |
biliary bud | 3.65e-11 | 1 |
hepatic duct | 3.65e-11 | 1 |
embryonic uterus | 9.05e-11 | 4 |
uterus | 9.05e-11 | 4 |
internal female genitalia | 8.42e-09 | 5 |