FFCP PHASE1:Mm9::chr1:186823757..186823853,-: Difference between revisions
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{{FFCP|EntrezGene=226778|HGNC=|MCL_coexpression_id=13|UniProt=Q8VHJ5,Q14DQ3,C9K101|association_with_transcript=-329bp_to_ENSMUST00000027929,NM_145515,uc007dyt.2,uc011wxy.1_5end|description=CAGE_peak_1_at_Mark1_5end|id=chr1:186823757..186823853,-|ontology_enrichment_celltype=CL:0000393!1.82e-13!39;CL:0000211!1.82e-13!39;CL:0000117!1.75e-12!23;CL:0000337!1.75e-12!23;CL:0000540!3.18e-12!33;CL:0000047!3.18e-12!33;CL:0000031!3.18e-12!33;CL:0000404!3.18e-12!33;CL:0000055!1.00e-10!50;CL:0002319!8.67e-10!43;CL:0000221!9.66e-10!44;CL:0000133!9.66e-10!44|ontology_enrichment_celltype_v019_2=CL:0000393,1.70e-13,39;CL:0000211,1.70e-13,39;CL:0000117,1.65e-12,23;CL:0000337,1.65e-12,23;CL:0000540,3.00e-12,33;CL:0000047,3.00e-12,33;CL:0000031,3.00e-12,33;CL:0000404,3.00e-12,33;CL:0002319,8.28e-10,43;CL:0000221,9.22e-10,44;CL:0000133,9.22e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.73e-24!73;UBERON:0005743!2.73e-24!73;UBERON:0000073!2.61e-23!75;UBERON:0001016!2.61e-23!75;UBERON:0004121!4.98e-23!102;UBERON:0000924!4.98e-23!102;UBERON:0006601!4.98e-23!102;UBERON:0001049!1.40e-20!52;UBERON:0005068!1.40e-20!52;UBERON:0006241!1.40e-20!52;UBERON:0007135!1.40e-20!52;UBERON:0002346!3.59e-20!71;UBERON:0003075!3.59e-20!71;UBERON:0007284!3.59e-20!71;UBERON:0000955!4.12e-19!50;UBERON:0006238!4.12e-19!50;UBERON:0002616!1.48e-18!49;UBERON:0000033!2.24e-18!63;UBERON:0002020!4.31e-17!34;UBERON:0003080!5.96e-17!40;UBERON:0003056!6.78e-17!49;UBERON:0002780!1.50e-16!39;UBERON:0001890!1.50e-16!39;UBERON:0006240!1.50e-16!39;UBERON:0002791!1.26e-14!29;UBERON:0003528!1.26e-14!29;UBERON:0001893!1.26e-14!29;UBERON:0000468!1.99e-11!333;UBERON:0000956!3.83e-11!21;UBERON:0001869!3.83e-11!21;UBERON:0000203!3.83e-11!21;UBERON:0000025!8.27e-11!114;UBERON:0004111!3.29e-10!122;UBERON:0000153!3.89e-09!94;UBERON:0007811!9.16e-09!86;UBERON:0002619!1.35e-08!17;UBERON:0000922!1.41e-08!328;UBERON:0002021!2.47e-07!10;UBERON:0000411!2.47e-07!10;UBERON:0001950!2.47e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.40e-24,73;UBERON:0004121,1.18e-23,95;UBERON:0000924,1.18e-23,95;UBERON:0006601,1.18e-23,95;UBERON:0001016,2.31e-23,75;UBERON:0010371,5.65e-22,73;UBERON:0002346,2.71e-21,64;UBERON:0003075,2.71e-21,64;UBERON:0007284,2.71e-21,64;UBERON:0000073,3.22e-21,54;UBERON:0001049,1.26e-20,52;UBERON:0005068,1.26e-20,52;UBERON:0006241,1.26e-20,52;UBERON:0007135,1.26e-20,52;UBERON:0000955,4.12e-18,47;UBERON:0006238,4.12e-18,47;UBERON:0010314,1.36e-17,92;UBERON:0002616,1.46e-17,46;UBERON:0002020,3.94e-17,34;UBERON:0003080,5.46e-17,40;UBERON:0003056,6.22e-17,49;UBERON:0002780,1.38e-16,39;UBERON:0001890,1.38e-16,39;UBERON:0006240,1.38e-16,39;UBERON:0003528,1.17e-14,29;UBERON:0002791,1.17e-14,29;UBERON:0001893,1.17e-14,29;UBERON:0000956,3.63e-11,21;UBERON:0001869,3.63e-11,21;UBERON:0000203,3.63e-11,21;UBERON:0000025,1.05e-10,114;UBERON:0004111,4.12e-10,122;UBERON:0000922,8.63e-09,320;UBERON:0002619,1.30e-08,17;UBERON:0002021,2.39e-07,10;UBERON:0000411,2.39e-07,10;UBERON:0001950,2.39e-07,10|phase1_expression=12.3314612270691,0.348975407639361,0.454999239389536,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,10.6304112688837,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,32.3554822197234,40.2466416941473,63.3236294957801,13.3006528539167,8.93903141159831,5.27246838562732,5.44403717407994,16.5183977517928,8.62515386189829,0,0,0,6.68874533693462,10.3152038377952,16.5015069528782,61.9088370230369,41.2612963832186,45.6358610524449,17.2810711355257,11.5608323494448,6.74924787961049,1.97773272513395,2.8419204597844,11.6844043102178,8.4528027170742,59.1030790158323,52.5173100110277,59.3116391010897,29.7077023779956,19.6573001446936,47.0364668985424,48.5936538062458,55.1531271966013,16.5173821499083,24.7713435885264,20.1224558565679,57.7661940258249,52.5139074277831,49.4867702028922,15.0758819460746,16.3201156909187,19.5581757154317,29.1682299618931,28.4743361598206,42.4990736481685,6.28527404665428,5.06329452715463,5.2175607966302,5.16254326188832,0.679971333707751,0.539703191637817,1.29955283489534,0,4.77511028447956,3.74946709671727,1.55871602761721,2.47337702157238,11.2674735821344,19.2489716121477,28.028576367731,35.5533351576666,1.29894624606728,1.01343946190039,2.02209778005913,3.19714863213368,2.07150306917737,7.12522267511159,11.2765462397988,10.0473607843007,10.8389283710347,9.64624899536784,15.6392980490487,7.41432888845085,1.73036477414062,20.2439099687876,3.5384422077995,10.676612096529,3.5334642953663,3.39412677194655,7.45567044872489,17.8596286177044,20.1068838540917,1.78819938646014,0,0,0,20.9706895166752,26.0775343606617,51.3926300141615,42.0654854865309,44.2387741181472,20.5710164113964,26.6075671431123,22.0991419555186,6.46916247172484,10.3616330957807,3.99839526184301,14.9638509407109,15.1735388926092,23.0479526150847,16.5775299619287,19.3904022581284,12.811372028485,15.7418897260344,5.69147415625834,14.2274875335676,16.0740168142646,15.1317966780996,14.0285268753648,10.0097009721215,15.3230953269753,12.9642745937004,12.3401245427466,0,0,0,13.8774267598786,8.44293815931946,9.7233513188948,9.70653415899362,10.0349758191176,8.02188987014367,7.67362017676346,13.1453966685813,10.2753501283109,10.6963902443762,8.37254066803386,9.48505071686512,5.84799949701329,6.58650345873152,6.84452735677896,22.2907345477975,44.2489833230923,0.330418782983798,1.32225283331772,10.6644125267617,12.5407802804637,13.0156135935314,12.1010114774006,10.229390016864,9.70150693174052,4.2707615539006,5.76446341534038,4.27269854960458,6.96347652144028,5.26403035221624,4.49409704327111,2.59365659849633,2.38969527905241,5.69003702859245,11.9960938240215,6.76246414038483,9.9789150644204,7.95205197387266,9.32806404541237,10.3707920883782,3.54264355151045,3.61097074035162,2.09775178667061,1.77871576252289,4.50481785433454,3.73462090715086,2.69834534861824,1.21716072833102,2.65294875727659,2.29163266603278,3.74004978686054,2.43202840162553,4.3929826110093,11.5014565221884,6.32639611036456,5.30464044294753,3.53610429125956,2.33216637578486,2.8946611281802,3.69506380333209,8.90609635321278,13.2001630918041,7.29903868833309,10.3263709246941,14.4055381399962,11.1880511216426,18.1474292507753,24.4334473364596,24.582580551014,37.312415865852,4.7520361267564,5.87128938344045,6.36455857758651,0,0,2.95058563811422,5.24279817978992,17.9816660786327,14.8858841972098,16.5574294830442,4.29200576247434,16.0909191902291,19.5219372148319,12.7099804662351,10.0366895140072,12.6995244226965,15.5692091933858,12.5491317519217,17.5353514746787,11.8586333383957,31.8108103257589,31.2268187458191,14.6013795007149,23.455722146915,21.7760562323747,2.65490276679926,5.58395463156457,7.86041248108353,6.22396763194464,8.85905678642318,8.30074899448604,9.8202751403924,8.72480950746013,6.77345018930971,5.37262488490887,2.10837217149998,1.03135543248187,17.0219802876894,15.1251318986301,15.9111181052788,9.43082954139006,14.7192393923087,19.4422011186257,21.8850197400821,20.3991515906782,2.58138878870081,7.62595455109753,5.73373834942901,16.6535115470895,25.1884505645613,20.4460815506448,17.5477345684611,22.8155850645635,2.33184669303881,23.5490133553347,1.19609616558497,18.3684312487268,7.59297562215818,1.50694765603753,0.683471138605126,1.83022538565218,0.339956859987711,0,0,2.86401185404534,13.91878371757,10.9792512248498,11.5565714679327,8.99079672862215,8.29777742235475,7.41753905116514,12.7286321817017,7.0674104335688,8.81381818384192,3.10669656543463,0.56369293868419,16.5963366108816,14.2294301793104,13.0282296190512,10.5911055251739,8.61676240002969,9.74065080759758,6.77062801188541,5.34782656571125,1.93267296660805,1.72818003754719,0.948033361884535,7.70355818102624,8.52500944468066,4.02754551231165,5.01274747868948,4.76835251475036,1.9231271923195,1.03382669022204,1.41353029927407,2.209997392995,1.10908803650525,1.94915761479505,1.25075394132428,1.98690733708667,10.4295976462997,4.21773311410723,1.07656627931371,3.35769232728157,8.113962949352,6.38120416534019,13.1869169472431,10.0753138167161,6.01886524842436,53.6514250486213,46.953174123732,47.5503276154699,52.7589269795121,32.1988784292202,40.7912704590438,36.4512150125175,47.7340475417674,43.5016712624836,48.6694693046711,16.5021882658841,25.936616771067,15.3660245178721,15.5588298923708,19.2844109617744,25.1865606576519,16.6685045851211,20.1914356094116,20.5388294138762,21.9846574234504,16.7296337927558,17.5422497489051,17.0427543595186,20.2959733123436,20.1598496034203,24.7672719467198,17.9620705214526,15.2398284166327,21.8405527425753,15.1614887738429,14.4005086001874,17.9250564220931,13.35242663705,17.8776092457764,16.7514697139288,17.7690676572521,19.2074371516411,14.994973551957,16.2964936615034,12.906272248128,19.6934130086129,19.0113650984837,14.7323175541088,17.0430525304563,14.6609024345667,26.2301106834843,15.9073493742878,18.0491685400571,15.1117782334386,9.04424818390014,10.2021847672985|short_description=p1@Mark1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226778 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VHJ5,uniprot:Q14DQ3,uniprot:C9K101 | |||
|association_with_transcript=-329bp_to_ENSMUST00000027929,NM_145515,uc007dyt.2,uc011wxy.1_5end | |||
|cluster_id=chr1:186823757..186823853,- | |||
|description=CAGE_peak_1_at_Mark1_5end | |||
|id=chr1:186823757..186823853,- | |||
|ontology_enrichment_celltype=CL:0000393!1.82e-13!39;CL:0000211!1.82e-13!39;CL:0000117!1.75e-12!23;CL:0000337!1.75e-12!23;CL:0000540!3.18e-12!33;CL:0000047!3.18e-12!33;CL:0000031!3.18e-12!33;CL:0000404!3.18e-12!33;CL:0000055!1.00e-10!50;CL:0002319!8.67e-10!43;CL:0000221!9.66e-10!44;CL:0000133!9.66e-10!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.70e-13,39;CL:0000211,1.70e-13,39;CL:0000117,1.65e-12,23;CL:0000337,1.65e-12,23;CL:0000540,3.00e-12,33;CL:0000047,3.00e-12,33;CL:0000031,3.00e-12,33;CL:0000404,3.00e-12,33;CL:0002319,8.28e-10,43;CL:0000221,9.22e-10,44;CL:0000133,9.22e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.73e-24!73;UBERON:0005743!2.73e-24!73;UBERON:0000073!2.61e-23!75;UBERON:0001016!2.61e-23!75;UBERON:0004121!4.98e-23!102;UBERON:0000924!4.98e-23!102;UBERON:0006601!4.98e-23!102;UBERON:0001049!1.40e-20!52;UBERON:0005068!1.40e-20!52;UBERON:0006241!1.40e-20!52;UBERON:0007135!1.40e-20!52;UBERON:0002346!3.59e-20!71;UBERON:0003075!3.59e-20!71;UBERON:0007284!3.59e-20!71;UBERON:0000955!4.12e-19!50;UBERON:0006238!4.12e-19!50;UBERON:0002616!1.48e-18!49;UBERON:0000033!2.24e-18!63;UBERON:0002020!4.31e-17!34;UBERON:0003080!5.96e-17!40;UBERON:0003056!6.78e-17!49;UBERON:0002780!1.50e-16!39;UBERON:0001890!1.50e-16!39;UBERON:0006240!1.50e-16!39;UBERON:0002791!1.26e-14!29;UBERON:0003528!1.26e-14!29;UBERON:0001893!1.26e-14!29;UBERON:0000468!1.99e-11!333;UBERON:0000956!3.83e-11!21;UBERON:0001869!3.83e-11!21;UBERON:0000203!3.83e-11!21;UBERON:0000025!8.27e-11!114;UBERON:0004111!3.29e-10!122;UBERON:0000153!3.89e-09!94;UBERON:0007811!9.16e-09!86;UBERON:0002619!1.35e-08!17;UBERON:0000922!1.41e-08!328;UBERON:0002021!2.47e-07!10;UBERON:0000411!2.47e-07!10;UBERON:0001950!2.47e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.40e-24,73;UBERON:0004121,1.18e-23,95;UBERON:0000924,1.18e-23,95;UBERON:0006601,1.18e-23,95;UBERON:0001016,2.31e-23,75;UBERON:0010371,5.65e-22,73;UBERON:0002346,2.71e-21,64;UBERON:0003075,2.71e-21,64;UBERON:0007284,2.71e-21,64;UBERON:0000073,3.22e-21,54;UBERON:0001049,1.26e-20,52;UBERON:0005068,1.26e-20,52;UBERON:0006241,1.26e-20,52;UBERON:0007135,1.26e-20,52;UBERON:0000955,4.12e-18,47;UBERON:0006238,4.12e-18,47;UBERON:0010314,1.36e-17,92;UBERON:0002616,1.46e-17,46;UBERON:0002020,3.94e-17,34;UBERON:0003080,5.46e-17,40;UBERON:0003056,6.22e-17,49;UBERON:0002780,1.38e-16,39;UBERON:0001890,1.38e-16,39;UBERON:0006240,1.38e-16,39;UBERON:0003528,1.17e-14,29;UBERON:0002791,1.17e-14,29;UBERON:0001893,1.17e-14,29;UBERON:0000956,3.63e-11,21;UBERON:0001869,3.63e-11,21;UBERON:0000203,3.63e-11,21;UBERON:0000025,1.05e-10,114;UBERON:0004111,4.12e-10,122;UBERON:0000922,8.63e-09,320;UBERON:0002619,1.30e-08,17;UBERON:0002021,2.39e-07,10;UBERON:0000411,2.39e-07,10;UBERON:0001950,2.39e-07,10 | |||
|phase1_expression=12.3314612270691,0.348975407639361,0.454999239389536,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,10.6304112688837,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,32.3554822197234,40.2466416941473,63.3236294957801,13.3006528539167,8.93903141159831,5.27246838562732,5.44403717407994,16.5183977517928,8.62515386189829,0,0,0,6.68874533693462,10.3152038377952,16.5015069528782,61.9088370230369,41.2612963832186,45.6358610524449,17.2810711355257,11.5608323494448,6.74924787961049,1.97773272513395,2.8419204597844,11.6844043102178,8.4528027170742,59.1030790158323,52.5173100110277,59.3116391010897,29.7077023779956,19.6573001446936,47.0364668985424,48.5936538062458,55.1531271966013,16.5173821499083,24.7713435885264,20.1224558565679,57.7661940258249,52.5139074277831,49.4867702028922,15.0758819460746,16.3201156909187,19.5581757154317,29.1682299618931,28.4743361598206,42.4990736481685,6.28527404665428,5.06329452715463,5.2175607966302,5.16254326188832,0.679971333707751,0.539703191637817,1.29955283489534,0,4.77511028447956,3.74946709671727,1.55871602761721,2.47337702157238,11.2674735821344,19.2489716121477,28.028576367731,35.5533351576666,1.29894624606728,1.01343946190039,2.02209778005913,3.19714863213368,2.07150306917737,7.12522267511159,11.2765462397988,10.0473607843007,10.8389283710347,9.64624899536784,15.6392980490487,7.41432888845085,1.73036477414062,20.2439099687876,3.5384422077995,10.676612096529,3.5334642953663,3.39412677194655,7.45567044872489,17.8596286177044,20.1068838540917,1.78819938646014,0,0,0,20.9706895166752,26.0775343606617,51.3926300141615,42.0654854865309,44.2387741181472,20.5710164113964,26.6075671431123,22.0991419555186,6.46916247172484,10.3616330957807,3.99839526184301,14.9638509407109,15.1735388926092,23.0479526150847,16.5775299619287,19.3904022581284,12.811372028485,15.7418897260344,5.69147415625834,14.2274875335676,16.0740168142646,15.1317966780996,14.0285268753648,10.0097009721215,15.3230953269753,12.9642745937004,12.3401245427466,0,0,0,13.8774267598786,8.44293815931946,9.7233513188948,9.70653415899362,10.0349758191176,8.02188987014367,7.67362017676346,13.1453966685813,10.2753501283109,10.6963902443762,8.37254066803386,9.48505071686512,5.84799949701329,6.58650345873152,6.84452735677896,22.2907345477975,44.2489833230923,0.330418782983798,1.32225283331772,10.6644125267617,12.5407802804637,13.0156135935314,12.1010114774006,10.229390016864,9.70150693174052,4.2707615539006,5.76446341534038,4.27269854960458,6.96347652144028,5.26403035221624,4.49409704327111,2.59365659849633,2.38969527905241,5.69003702859245,11.9960938240215,6.76246414038483,9.9789150644204,7.95205197387266,9.32806404541237,10.3707920883782,3.54264355151045,3.61097074035162,2.09775178667061,1.77871576252289,4.50481785433454,3.73462090715086,2.69834534861824,1.21716072833102,2.65294875727659,2.29163266603278,3.74004978686054,2.43202840162553,4.3929826110093,11.5014565221884,6.32639611036456,5.30464044294753,3.53610429125956,2.33216637578486,2.8946611281802,3.69506380333209,8.90609635321278,13.2001630918041,7.29903868833309,10.3263709246941,14.4055381399962,11.1880511216426,18.1474292507753,24.4334473364596,24.582580551014,37.312415865852,4.7520361267564,5.87128938344045,6.36455857758651,0,0,2.95058563811422,5.24279817978992,17.9816660786327,14.8858841972098,16.5574294830442,4.29200576247434,16.0909191902291,19.5219372148319,12.7099804662351,10.0366895140072,12.6995244226965,15.5692091933858,12.5491317519217,17.5353514746787,11.8586333383957,31.8108103257589,31.2268187458191,14.6013795007149,23.455722146915,21.7760562323747,2.65490276679926,5.58395463156457,7.86041248108353,6.22396763194464,8.85905678642318,8.30074899448604,9.8202751403924,8.72480950746013,6.77345018930971,5.37262488490887,2.10837217149998,1.03135543248187,17.0219802876894,15.1251318986301,15.9111181052788,9.43082954139006,14.7192393923087,19.4422011186257,21.8850197400821,20.3991515906782,2.58138878870081,7.62595455109753,5.73373834942901,16.6535115470895,25.1884505645613,20.4460815506448,17.5477345684611,22.8155850645635,2.33184669303881,23.5490133553347,1.19609616558497,18.3684312487268,7.59297562215818,1.50694765603753,0.683471138605126,1.83022538565218,0.339956859987711,0,0,2.86401185404534,13.91878371757,10.9792512248498,11.5565714679327,8.99079672862215,8.29777742235475,7.41753905116514,12.7286321817017,7.0674104335688,8.81381818384192,3.10669656543463,0.56369293868419,16.5963366108816,14.2294301793104,13.0282296190512,10.5911055251739,8.61676240002969,9.74065080759758,6.77062801188541,5.34782656571125,1.93267296660805,1.72818003754719,0.948033361884535,7.70355818102624,8.52500944468066,4.02754551231165,5.01274747868948,4.76835251475036,1.9231271923195,1.03382669022204,1.41353029927407,2.209997392995,1.10908803650525,1.94915761479505,1.25075394132428,1.98690733708667,10.4295976462997,4.21773311410723,1.07656627931371,3.35769232728157,8.11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| |||
|short_description=p1@Mark1 | |||
}} |
Revision as of 10:53, 5 August 2015
Short description: | p1@Mark1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mark1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -329bp_to_ENSMUST00000027929, NM_145515, uc007dyt.2, uc011wxy.1_5end |
EntrezGene: | 226778 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.70e-13 | 39 |
electrically active cell | 1.70e-13 | 39 |
CNS neuron (sensu Vertebrata) | 1.65e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-12 | 23 |
neuron | 3.00e-12 | 33 |
neuronal stem cell | 3.00e-12 | 33 |
neuroblast | 3.00e-12 | 33 |
electrically signaling cell | 3.00e-12 | 33 |
neural cell | 8.28e-10 | 43 |
ectodermal cell | 9.22e-10 | 44 |
neurectodermal cell | 9.22e-10 | 44 |